RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 C14orf28Q4W4Y0 310 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 ARSIQ5FYB1 569 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 BCL2L15Q5TBC7 163 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 KCNIP4Q6PIL6 250 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 VSTM1Q6UX27 236 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 UNQ6126/PRO20091Q6UXV3 157 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 CEACAM20Q6UY09 585 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 MEX3BQ6ZN04 569 aaKnown RBP6.64□□□□□ -1.35
BRCA1-210ENST00000471181 OTOP1Q7RTM1 612 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 CEACAM19Q7Z692 300 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 UEVLDQ8IX04 471 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 GPR137CQ8N3F9 429 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 OR51T1Q8NGJ9 327 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 TOMM40LQ969M1 308 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 KCNH6Q9H252 994 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 MS4A12Q9NXJ0 267 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 ST14Q9Y5Y6 855 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 ARVCFO00192 962 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 TREHO43280 583 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 SLITRK5O94991 958 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 SPDEFO95238 335 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 VEGFAP15692 232 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-210ENST00000471181 TYRP1P17643 537 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 PPP5CP53041 499 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 CSNK2A1P68400 391 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-210ENST00000471181 OGDHQ02218 1023 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 KCNC4Q03721 635 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 DDR1Q08345 913 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 GK2Q14410 553 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-210ENST00000471181 PTPRRQ15256 657 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 RAB35Q15286 201 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 C9orf57Q5W0N0 161 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 CST9LP1Q5W188 147 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 TMEM151AQ8N4L1 468 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 CSNK2A3Q8NEV1 391 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 OR56A3Q8NH54 315 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 NDNFQ8TB73 568 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 PTERQ96BW5 349 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 CMTM7Q96FZ5 175 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 CPXM1Q96SM3 734 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 PHOX2BQ99453 314 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 PITX2Q99697 317 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 FAM173AQ9BQD7 235 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 SUCNR1Q9BXA5 334 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 ACTR6Q9GZN1 396 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 BTBD1Q9H0C5 482 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 CDH20Q9HBT6 801 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-210ENST00000471181 FAM86C1Q9NVL1 165 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 ZMAT5Q9UDW3 170 aaKnown RBP6.64□□□□□ -1.35
BRCA1-210ENST00000471181 DIP2AQ14689 1571 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 A0A1W2PPV4 95 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 C2orf78A6NCI8 922 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 DDTLA6NHG4 134 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-210ENST00000471181 CD300LBA8K4G0 201 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 FOXO6A8MYZ6 492 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 CLIC1O00299 241 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 B4GALT5O43286 388 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 FMO6PO60774 539 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 ART1P52961 327 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 CRYBB1P53674 252 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-210ENST00000471181 RAB8AP61006 207 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 LASP1Q14847 261 aaKnown RBP6.64□□□□□ -1.35
BRCA1-210ENST00000471181 ACSBG2Q5FVE4 666 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 SFRP4Q6FHJ7 346 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-210ENST00000471181 HEPHL1Q6MZM0 1159 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 FAM43BQ6ZT52 329 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-210ENST00000471181 WDR53Q7Z5U6 358 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-210ENST00000471181 IGFN1Q86VF2 1251 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 RDH10Q8IZV5 341 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 FTMTQ8N4E7 242 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 C1orf52Q8N6N3 182 aaKnown RBP6.64□□□□□ -1.35
BRCA1-210ENST00000471181 CCDC71LQ8N9Z2 235 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 GLB1L3Q8NCI6 653 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-210ENST00000471181 SMG8Q8ND04 991 aaKnown RBP6.64□□□□□ -1.35
BRCA1-210ENST00000471181 RPLP0P6Q8NHW5 317 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 JOSD2Q8TAC2 188 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 OSTF1Q92882 214 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 BPIFA2Q96DR5 249 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 NAA11Q9BSU3 229 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-210ENST00000471181 MRI1Q9BV20 369 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 MROQ9BYG7 248 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 FAM234AQ9H0X4 552 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 LRRC19Q9H756 370 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 GOLGA2P5Q9HBQ8 144 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 DCAF16Q9NXF7 216 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 NLGN3Q9NZ94 848 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 SLC7A8Q9UHI5 535 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 SLC22A14Q9Y267 594 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 CPS1P31327 1500 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 NCANO14594 1321 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 FAM237AA0A1B0GTK4 181 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 C20orf202A1L168 122 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 MEIS3P2A8K0S8 358 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 SOCS2O14508 198 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 PCDH17O14917 1159 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 AOC1P19801 751 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 RAB3BP20337 219 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 HOXD11P31277 338 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-210ENST00000471181 RAB5CP51148 216 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms