RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 ABCA7Q8IZY2 2146 aa3.13□□□□□ -1.91
BRCA2-202ENST00000470094 RNF103-CHMP3A0A140T963 221 aa3.13□□□□□ -1.91
BRCA2-202ENST00000470094 ARHGEF33A8MVX0 844 aa3.13□□□□□ -1.91
BRCA2-202ENST00000470094 SRRM5B3KS81 715 aa3.13□□□□□ -1.91
BRCA2-202ENST00000470094 CACNB4O00305 520 aaPredicted RBP3.13□□□□□ -1.91
BRCA2-202ENST00000470094 ZNF749O43361 778 aa3.13□□□□□ -1.91
BRCA2-202ENST00000470094 BCL2L11O43521 198 aa3.13□□□□□ -1.91
BRCA2-202ENST00000470094 GALR3O60755 368 aaPredicted RBP3.13□□□□□ -1.91
BRCA2-202ENST00000470094 B3GALNT1O75752 331 aa3.13□□□□□ -1.91
BRCA2-202ENST00000470094 PTMAP06454 111 aaKnown RBP3.13□□□□□ -1.91
BRCA2-202ENST00000470094 DLATP10515 647 aaKnown RBP3.13□□□□□ -1.91
BRCA2-202ENST00000470094 FOLR2P14207 255 aa3.13□□□□□ -1.91
BRCA2-202ENST00000470094 MAPK3P27361 379 aaPredicted RBP3.13□□□□□ -1.91
BRCA2-202ENST00000470094 NDUFV3P56181 108 aaKnown RBP3.13□□□□□ -1.91
BRCA2-202ENST00000470094 CETN1Q12798 172 aa3.13□□□□□ -1.91
BRCA2-202ENST00000470094 MAPK11Q15759 364 aa3.13□□□□□ -1.91
BRCA2-202ENST00000470094 STXBP2Q15833 593 aa3.13□□□□□ -1.91
BRCA2-202ENST00000470094 C15orf32Q32M92 178 aa3.13□□□□□ -1.91
BRCA2-202ENST00000470094 ARMCX4Q5H9R4 360 aa3.13□□□□□ -1.91
BRCA2-202ENST00000470094 Q71RC1 249 aaPredicted RBP3.13□□□□□ -1.91
BRCA2-202ENST00000470094 TIPARPQ7Z3E1 657 aaKnown RBP3.13□□□□□ -1.91
BRCA2-202ENST00000470094 ZNF410Q86VK4 478 aa3.13□□□□□ -1.91
BRCA2-202ENST00000470094 ANKRD46Q86W74 232 aa3.13□□□□□ -1.91
BRCA2-202ENST00000470094 ZC3H3Q8IXZ2 948 aaKnown RBP3.13□□□□□ -1.91
BRCA2-202ENST00000470094 HDDC3Q8N4P3 179 aa3.13□□□□□ -1.91
BRCA2-202ENST00000470094 LINC00612Q8N6U2 182 aa3.13□□□□□ -1.91
BRCA2-202ENST00000470094 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.13□□□□□ -1.91
BRCA2-202ENST00000470094 SLC13A3Q8WWT9 602 aa3.13□□□□□ -1.91
BRCA2-202ENST00000470094 C11orf52Q96A22 123 aa3.13□□□□□ -1.91
BRCA2-202ENST00000470094 EPSTI1Q96J88 318 aa3.13□□□□□ -1.91
BRCA2-202ENST00000470094 RUNDC3BQ96NL0 473 aa3.13□□□□□ -1.91
BRCA2-202ENST00000470094 RUFY1Q96T51 708 aa3.13□□□□□ -1.91
BRCA2-202ENST00000470094 SLC39A8Q9C0K1 460 aa3.13□□□□□ -1.91
BRCA2-202ENST00000470094 STRADBQ9C0K7 418 aa3.13□□□□□ -1.91
BRCA2-202ENST00000470094 C1orf21Q9H246 121 aa3.13□□□□□ -1.91
BRCA2-202ENST00000470094 ADNPQ9H2P0 1102 aa3.13□□□□□ -1.91
BRCA2-202ENST00000470094 IL1RAPQ9NPH3 570 aa3.13□□□□□ -1.91
BRCA2-202ENST00000470094 MRPL17Q9NRX2 175 aaKnown RBP3.13□□□□□ -1.91
BRCA2-202ENST00000470094 HMG20BQ9P0W2 317 aa3.13□□□□□ -1.91
BRCA2-202ENST00000470094 ITM2BQ9Y287 266 aa3.13□□□□□ -1.91
BRCA2-202ENST00000470094 STYXL1Q9Y6J8 313 aa3.13□□□□□ -1.91
BRCA2-202ENST00000470094 A0A087X0K7 114 aa3.12□□□□□ -1.91
BRCA2-202ENST00000470094 C2orf92A0A1B0GVN3 265 aa3.12□□□□□ -1.91
BRCA2-202ENST00000470094 KRTAP9-6A8MVA2 160 aa3.12□□□□□ -1.91
BRCA2-202ENST00000470094 LMO7DNF2Z398 122 aa3.12□□□□□ -1.91
BRCA2-202ENST00000470094 MLNRO43193 412 aa3.12□□□□□ -1.91
BRCA2-202ENST00000470094 PRPSAP2O60256 369 aa3.12□□□□□ -1.91
BRCA2-202ENST00000470094 HPP00738 406 aa3.12□□□□□ -1.91
BRCA2-202ENST00000470094 SLC4A1P02730 911 aa3.12□□□□□ -1.91
BRCA2-202ENST00000470094 ALPPP05187 535 aa3.12□□□□□ -1.91
BRCA2-202ENST00000470094 ALPPL2P10696 532 aa3.12□□□□□ -1.91
BRCA2-202ENST00000470094 KRT3P12035 628 aa3.12□□□□□ -1.91
BRCA2-202ENST00000470094 AHCYP23526 432 aa3.12□□□□□ -1.91
BRCA2-202ENST00000470094 FCGR2BP31994 310 aaPredicted RBP3.12□□□□□ -1.91
BRCA2-202ENST00000470094 FCGR2CP31995 323 aa3.12□□□□□ -1.91
BRCA2-202ENST00000470094 SLC1A3P43003 542 aa3.12□□□□□ -1.91
BRCA2-202ENST00000470094 RIDAP52758 137 aaKnown RBP3.12□□□□□ -1.91
BRCA2-202ENST00000470094 ABCE1P61221 599 aaKnown RBP3.12□□□□□ -1.91
BRCA2-202ENST00000470094 RPP38P78345 283 aaKnown RBP3.12□□□□□ -1.91
BRCA2-202ENST00000470094 GFPT1Q06210 699 aaPredicted RBP3.12□□□□□ -1.91
BRCA2-202ENST00000470094 CNTN1Q12860 1018 aa3.12□□□□□ -1.91
BRCA2-202ENST00000470094 ABRQ12979 859 aa3.12□□□□□ -1.91
BRCA2-202ENST00000470094 SLC27A4Q6P1M0 643 aa3.12□□□□□ -1.91
BRCA2-202ENST00000470094 TOM1L2Q6ZVM7 507 aa3.12□□□□□ -1.91
BRCA2-202ENST00000470094 SH2D6Q7Z4S9 175 aa3.12□□□□□ -1.91
BRCA2-202ENST00000470094 KCNMB4Q86W47 210 aa3.12□□□□□ -1.91
BRCA2-202ENST00000470094 HPS6Q86YV9 775 aa3.12□□□□□ -1.91
BRCA2-202ENST00000470094 MRPL43Q8N983 215 aaKnown RBP3.12□□□□□ -1.91
BRCA2-202ENST00000470094 CLEC1AQ8NC01 280 aa3.12□□□□□ -1.91
BRCA2-202ENST00000470094 URGCPQ8TCY9 931 aa3.12□□□□□ -1.91
BRCA2-202ENST00000470094 C17orf62Q9BQA9 187 aa3.12□□□□□ -1.91
BRCA2-202ENST00000470094 ACPTQ9BZG2 426 aa3.12□□□□□ -1.91
BRCA2-202ENST00000470094 TSPYL1Q9H0U9 437 aa3.12□□□□□ -1.91
BRCA2-202ENST00000470094 CUEDC2Q9H467 287 aa3.12□□□□□ -1.91
BRCA2-202ENST00000470094 FNDC4Q9H6D8 234 aaPredicted RBP3.12□□□□□ -1.91
BRCA2-202ENST00000470094 MOB1AQ9H8S9 216 aa3.12□□□□□ -1.91
BRCA2-202ENST00000470094 HPF1Q9NWY4 346 aa3.12□□□□□ -1.91
BRCA2-202ENST00000470094 FAM120CQ9NX05 1096 aaKnown RBP3.12□□□□□ -1.91
BRCA2-202ENST00000470094 GPR83Q9NYM4 423 aa3.12□□□□□ -1.91
BRCA2-202ENST00000470094 TSPAN16Q9UKR8 245 aa3.12□□□□□ -1.91
BRCA2-202ENST00000470094 PIN4Q9Y237 131 aaKnown RBP3.12□□□□□ -1.91
BRCA2-202ENST00000470094 RPH3AQ9Y2J0 694 aaPredicted RBP3.12□□□□□ -1.91
BRCA2-202ENST00000470094 TDRKHQ9Y2W6 561 aaKnown RBP3.12□□□□□ -1.91
BRCA2-202ENST00000470094 AUP1Q9Y679 476 aa3.12□□□□□ -1.91
BRCA2-202ENST00000470094 PFASO15067 1338 aa3.12□□□□□ -1.91
BRCA2-202ENST00000470094 TRGV8A0A0C4DH27 118 aa3.11□□□□□ -1.91
BRCA2-202ENST00000470094 TRBV2A0A0J9YWF9 115 aa3.11□□□□□ -1.91
BRCA2-202ENST00000470094 SYCE3A1L190 88 aa3.11□□□□□ -1.91
BRCA2-202ENST00000470094 A8MU76 341 aa3.11□□□□□ -1.91
BRCA2-202ENST00000470094 SCO2O43819 266 aa3.11□□□□□ -1.91
BRCA2-202ENST00000470094 LETM1O95202 739 aaPredicted RBP3.11□□□□□ -1.91
BRCA2-202ENST00000470094 CD1DP15813 335 aa3.11□□□□□ -1.91
BRCA2-202ENST00000470094 CRYBA2P53672 197 aa3.11□□□□□ -1.91
BRCA2-202ENST00000470094 ACKR1Q16570 336 aa3.11□□□□□ -1.91
BRCA2-202ENST00000470094 TOR1AIP1Q5JTV8 583 aa3.11□□□□□ -1.91
BRCA2-202ENST00000470094 AGAP6Q5VW22 663 aa3.11□□□□□ -1.91
BRCA2-202ENST00000470094 PM20D1Q6GTS8 502 aa3.11□□□□□ -1.91
BRCA2-202ENST00000470094 Q6ZR54 194 aa3.11□□□□□ -1.91
BRCA2-202ENST00000470094 C17orf107Q6ZR85 190 aa3.11□□□□□ -1.91
BRCA2-202ENST00000470094 C1orf186Q6ZWK4 172 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 247.3 ms