RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 ITGA2P17301 1181 aa13.96□□□□□ -0.18
CBWD3-205ENST00000469687 FCARP24071 287 aa13.96□□□□□ -0.18
CBWD3-205ENST00000469687 GJA4P35212 333 aa13.96□□□□□ -0.18
CBWD3-205ENST00000469687 MAPK11Q15759 364 aa13.96□□□□□ -0.18
CBWD3-205ENST00000469687 REEP3Q6NUK4 255 aa13.96□□□□□ -0.18
CBWD3-205ENST00000469687 PSRC1Q6PGN9 363 aaPredicted RBP13.96□□□□□ -0.18
CBWD3-205ENST00000469687 FBXO46Q6PJ61 603 aaPredicted RBP13.96□□□□□ -0.18
CBWD3-205ENST00000469687 VITQ6UXI7 678 aa13.96□□□□□ -0.18
CBWD3-205ENST00000469687 UBE3DQ7Z6J8 389 aa13.96□□□□□ -0.18
CBWD3-205ENST00000469687 GPR32P1Q8NGA4 272 aa13.96□□□□□ -0.18
CBWD3-205ENST00000469687 APOBEC4Q8WW27 367 aaKnown RBP13.96□□□□□ -0.18
CBWD3-205ENST00000469687 LGALS12Q96DT0 336 aa13.96□□□□□ -0.18
CBWD3-205ENST00000469687 NEURL3Q96EH8 262 aa13.96□□□□□ -0.18
CBWD3-205ENST00000469687 MACROD1Q9BQ69 325 aa13.96□□□□□ -0.18
CBWD3-205ENST00000469687 AICDAQ9GZX7 198 aa13.96□□□□□ -0.18
CBWD3-205ENST00000469687 OSGEPL1Q9H4B0 414 aa13.96□□□□□ -0.18
CBWD3-205ENST00000469687 SERHL2Q9H4I8 314 aa13.96□□□□□ -0.18
CBWD3-205ENST00000469687 ZBTB20Q9HC78 741 aaPredicted RBP13.96□□□□□ -0.18
CBWD3-205ENST00000469687 PALMDQ9NP74 551 aa13.96□□□□□ -0.18
CBWD3-205ENST00000469687 WASH6PQ9NQA3 447 aa13.96□□□□□ -0.18
CBWD3-205ENST00000469687 DNAAF2Q9NVR5 837 aaKnown RBP13.96□□□□□ -0.18
CBWD3-205ENST00000469687 TAS2R16Q9NYV7 291 aa13.96□□□□□ -0.18
CBWD3-205ENST00000469687 AHSPQ9NZD4 102 aa13.96□□□□□ -0.18
CBWD3-205ENST00000469687 THAP10Q9P2Z0 257 aaPredicted RBP13.96□□□□□ -0.18
CBWD3-205ENST00000469687 DOLKQ9UPQ8 538 aa13.96□□□□□ -0.18
CBWD3-205ENST00000469687 IGKV1-8A0A0C4DH67 115 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 PRR23AA6NEV1 266 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 CLCA1A8K7I4 914 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 SCAMP1O15126 338 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 PAK4O96013 591 aaPredicted RBP13.95□□□□□ -0.18
CBWD3-205ENST00000469687 SERPIND1P05546 499 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 CBLP22681 906 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 CCR8P51685 355 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 CRISP3P54108 245 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 REEP5Q00765 189 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 FGL2Q14314 439 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 PTGES3Q15185 160 aaKnown RBP13.95□□□□□ -0.18
CBWD3-205ENST00000469687 PDGFRLQ15198 375 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 LEXMQ3ZCV2 418 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 KLHL17Q6TDP4 642 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 OLIG3Q7RTU3 272 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 DSG4Q86SJ6 1040 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 RBM45Q8IUH3 476 aaKnown RBP13.95□□□□□ -0.18
CBWD3-205ENST00000469687 PHF10Q8WUB8 498 aaKnown RBP13.95□□□□□ -0.18
CBWD3-205ENST00000469687 CHPT1Q8WUD6 406 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 ALPK1Q96QP1 1244 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 BCL7BQ9BQE9 202 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 ITPAQ9BY32 194 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 NMNAT1Q9HAN9 279 aaPredicted RBP13.95□□□□□ -0.18
CBWD3-205ENST00000469687 PELI2Q9HAT8 420 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 FKBP14Q9NWM8 211 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 HCN4Q9Y3Q4 1203 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 RWDD3Q9Y3V2 267 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 FAM32AQ9Y421 112 aaKnown RBP13.95□□□□□ -0.18
CBWD3-205ENST00000469687 PLEKHM1Q9Y4G2 1056 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 SEMA3DO95025 777 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 CCNB2O95067 398 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 KAT7O95251 611 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 IFNA14P01570 189 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 CDK1P06493 297 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 POU2F2P09086 479 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 SLC35G4P0C7Q5 338 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 BMP4P12644 408 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 HOXB3P14651 431 aaPredicted RBP13.95□□□□□ -0.18
CBWD3-205ENST00000469687 RHCEP18577 417 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 GRK5P34947 590 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 HMGA2P52926 109 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 PCBP4P57723 403 aaKnown RBP13.95□□□□□ -0.18
CBWD3-205ENST00000469687 IFITM3Q01628 133 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 ARHGAP19Q14CB8 494 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 C6orf120Q7Z4R8 191 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 ADCK2Q7Z695 626 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 ZNF554Q86TJ5 538 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 OR5P2Q8WZ92 322 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 SMPDL3AQ92484 453 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 VMP1Q96GC9 406 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 TEFMQ96QE5 360 aaKnown RBP13.95□□□□□ -0.18
CBWD3-205ENST00000469687 INSM2Q96T92 566 aaPredicted RBP13.95□□□□□ -0.18
CBWD3-205ENST00000469687 PLA2G2FQ9BZM2 168 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 PLCXD1Q9NUJ7 323 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 TBCCD1Q9NVR7 557 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 SPATA7Q9P0W8 599 aa13.95□□□□□ -0.18
CBWD3-205ENST00000469687 A0A1W2PP55 124 aa13.94□□□□□ -0.18
CBWD3-205ENST00000469687 PRAMEF27A3QJZ7 478 aa13.94□□□□□ -0.18
CBWD3-205ENST00000469687 EFCAB9A8MZ26 197 aa13.94□□□□□ -0.18
CBWD3-205ENST00000469687 BOLA2-SMG1P6H3BVE0 249 aa13.94□□□□□ -0.18
CBWD3-205ENST00000469687 HMGN4O00479 90 aa13.94□□□□□ -0.18
CBWD3-205ENST00000469687 NDUFS4O43181 175 aa13.94□□□□□ -0.18
CBWD3-205ENST00000469687 MRPS14O60783 128 aaKnown RBP13.94□□□□□ -0.18
CBWD3-205ENST00000469687 PTHP01270 115 aa13.94□□□□□ -0.18
CBWD3-205ENST00000469687 IFNW1P05000 195 aa13.94□□□□□ -0.18
CBWD3-205ENST00000469687 CD72P21854 359 aa13.94□□□□□ -0.18
CBWD3-205ENST00000469687 CTSKP43235 329 aa13.94□□□□□ -0.18
CBWD3-205ENST00000469687 CSNK1G2P78368 415 aa13.94□□□□□ -0.18
CBWD3-205ENST00000469687 GPM6BQ13491 265 aa13.94□□□□□ -0.18
CBWD3-205ENST00000469687 ZNF846Q147U1 533 aa13.94□□□□□ -0.18
CBWD3-205ENST00000469687 HEPACAMQ14CZ8 416 aa13.94□□□□□ -0.18
CBWD3-205ENST00000469687 IRF4Q15306 451 aa13.94□□□□□ -0.18
CBWD3-205ENST00000469687 TBCEQ15813 527 aaPredicted RBP13.94□□□□□ -0.18
CBWD3-205ENST00000469687 DGUOKQ16854 277 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms