RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 ENDOUP21128 410 aaKnown RBP11.33□□□□□ -0.6
HDAC3-204ENST00000469207 GGT5P36269 586 aa11.33□□□□□ -0.6
HDAC3-204ENST00000469207 MAN2A2P49641 1150 aa11.33□□□□□ -0.6
HDAC3-204ENST00000469207 ARL4CP56559 192 aa11.33□□□□□ -0.6
HDAC3-204ENST00000469207 CHIT1Q13231 466 aa11.33□□□□□ -0.6
HDAC3-204ENST00000469207 SLC10A1Q14973 349 aa11.33□□□□□ -0.6
HDAC3-204ENST00000469207 ADGRD1Q6QNK2 874 aa11.33□□□□□ -0.6
HDAC3-204ENST00000469207 B3GNT6Q6ZMB0 384 aa11.33□□□□□ -0.6
HDAC3-204ENST00000469207 RTL4Q6ZR62 310 aa11.33□□□□□ -0.6
HDAC3-204ENST00000469207 ADAMTSL2Q86TH1 951 aa11.33□□□□□ -0.6
HDAC3-204ENST00000469207 GPSM1Q86YR5 675 aa11.33□□□□□ -0.6
HDAC3-204ENST00000469207 GPALPP1Q8IXQ4 340 aa11.33□□□□□ -0.6
HDAC3-204ENST00000469207 ZZZ3Q8IYH5 903 aa11.33□□□□□ -0.6
HDAC3-204ENST00000469207 ACOT4Q8N9L9 421 aa11.33□□□□□ -0.6
HDAC3-204ENST00000469207 OR14A16Q8NHC5 309 aa11.33□□□□□ -0.6
HDAC3-204ENST00000469207 EXT2Q93063 718 aa11.33□□□□□ -0.6
HDAC3-204ENST00000469207 UCN3Q969E3 161 aa11.33□□□□□ -0.6
HDAC3-204ENST00000469207 RUNDC3BQ96NL0 473 aa11.33□□□□□ -0.6
HDAC3-204ENST00000469207 RHOJQ9H4E5 214 aa11.33□□□□□ -0.6
HDAC3-204ENST00000469207 LDAHQ9H6V9 325 aa11.33□□□□□ -0.6
HDAC3-204ENST00000469207 COPS7BQ9H9Q2 264 aaPredicted RBP11.33□□□□□ -0.6
HDAC3-204ENST00000469207 IL1RL2Q9HB29 575 aa11.33□□□□□ -0.6
HDAC3-204ENST00000469207 PROK2Q9HC23 129 aa11.33□□□□□ -0.6
HDAC3-204ENST00000469207 SACM1LQ9NTJ5 587 aa11.33□□□□□ -0.6
HDAC3-204ENST00000469207 CCM2LQ9NUG4 571 aaPredicted RBP11.33□□□□□ -0.6
HDAC3-204ENST00000469207 SNX24Q9Y343 169 aa11.33□□□□□ -0.6
HDAC3-204ENST00000469207 ATG4BQ9Y4P1 393 aa11.33□□□□□ -0.6
HDAC3-204ENST00000469207 MTORP42345 2549 aa11.33□□□□□ -0.6
HDAC3-204ENST00000469207 NCKAP5O14513 1909 aa11.33□□□□□ -0.6
HDAC3-204ENST00000469207 VPS13CQ709C8 3753 aa11.32□□□□□ -0.6
HDAC3-204ENST00000469207 FGF17O60258 216 aa11.32□□□□□ -0.6
HDAC3-204ENST00000469207 CCNT2O60583 730 aaKnown RBP11.32□□□□□ -0.6
HDAC3-204ENST00000469207 STK16O75716 305 aa11.32□□□□□ -0.6
HDAC3-204ENST00000469207 SEC31AO94979 1220 aaKnown RBP11.32□□□□□ -0.6
HDAC3-204ENST00000469207 ZWINTO95229 277 aa11.32□□□□□ -0.6
HDAC3-204ENST00000469207 P04436 131 aa11.32□□□□□ -0.6
HDAC3-204ENST00000469207 CD1DP15813 335 aa11.32□□□□□ -0.6
HDAC3-204ENST00000469207 ATP5A1P25705 553 aaKnown RBP11.32□□□□□ -0.6
HDAC3-204ENST00000469207 SSTR1P30872 391 aa11.32□□□□□ -0.6
HDAC3-204ENST00000469207 MSH2P43246 934 aa11.32□□□□□ -0.6
HDAC3-204ENST00000469207 WNT3P56703 355 aa11.32□□□□□ -0.6
HDAC3-204ENST00000469207 DR1Q01658 176 aa11.32□□□□□ -0.6
HDAC3-204ENST00000469207 EFTUD2Q15029 972 aaKnown RBP eCLIP11.32□□□□□ -0.6
HDAC3-204ENST00000469207 PIGGQ5H8A4 983 aa11.32□□□□□ -0.6
HDAC3-204ENST00000469207 NDUFAF5Q5TEU4 345 aa11.32□□□□□ -0.6
HDAC3-204ENST00000469207 PRAMEF20Q5VT98 475 aa11.32□□□□□ -0.6
HDAC3-204ENST00000469207 LYPD8Q6UX82 237 aa11.32□□□□□ -0.6
HDAC3-204ENST00000469207 RGS9BPQ6ZS82 235 aa11.32□□□□□ -0.6
HDAC3-204ENST00000469207 GK5Q6ZS86 529 aa11.32□□□□□ -0.6
HDAC3-204ENST00000469207 WDR53Q7Z5U6 358 aaPredicted RBP11.32□□□□□ -0.6
HDAC3-204ENST00000469207 CREG2Q8IUH2 290 aa11.32□□□□□ -0.6
HDAC3-204ENST00000469207 C9orf40Q8IXQ3 194 aa11.32□□□□□ -0.6
HDAC3-204ENST00000469207 ZBED8Q8IZ13 594 aa11.32□□□□□ -0.6
HDAC3-204ENST00000469207 FAM109AQ8N4B1 249 aa11.32□□□□□ -0.6
HDAC3-204ENST00000469207 ZNF473Q8WTR7 871 aaKnown RBP11.32□□□□□ -0.6
HDAC3-204ENST00000469207 LRRC39Q96DD0 335 aa11.32□□□□□ -0.6
HDAC3-204ENST00000469207 PTCD3Q96EY7 689 aaKnown RBP11.32□□□□□ -0.6
HDAC3-204ENST00000469207 SENP5Q96HI0 755 aaPredicted RBP11.32□□□□□ -0.6
HDAC3-204ENST00000469207 TMUB1Q9BVT8 246 aa11.32□□□□□ -0.6
HDAC3-204ENST00000469207 MS4A8Q9BY19 250 aa11.32□□□□□ -0.6
HDAC3-204ENST00000469207 DERL2Q9GZP9 239 aa11.32□□□□□ -0.6
HDAC3-204ENST00000469207 OR51B5Q9H339 312 aa11.32□□□□□ -0.6
HDAC3-204ENST00000469207 EXO5Q9H790 373 aa11.32□□□□□ -0.6
HDAC3-204ENST00000469207 PRM3Q9NNZ6 103 aa11.32□□□□□ -0.6
HDAC3-204ENST00000469207 ZNF358Q9NW07 568 aa11.32□□□□□ -0.6
HDAC3-204ENST00000469207 DNAJB12Q9NXW2 375 aaKnown RBP11.32□□□□□ -0.6
HDAC3-204ENST00000469207 GPRC5BQ9NZH0 403 aa11.32□□□□□ -0.6
HDAC3-204ENST00000469207 CD274Q9NZQ7 290 aa11.32□□□□□ -0.6
HDAC3-204ENST00000469207 KCNN3Q9UGI6 736 aa11.32□□□□□ -0.6
HDAC3-204ENST00000469207 PTBP2Q9UKA9 531 aaKnown RBP11.32□□□□□ -0.6
HDAC3-204ENST00000469207 L3MBTL1Q9Y468 752 aa11.32□□□□□ -0.6
HDAC3-204ENST00000469207 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.32□□□□□ -0.6
HDAC3-204ENST00000469207 ITPR3Q14573 2671 aa11.31□□□□□ -0.6
HDAC3-204ENST00000469207 A0A088AWK7 358 aa11.31□□□□□ -0.6
HDAC3-204ENST00000469207 OR14I1A6ND48 311 aa11.31□□□□□ -0.6
HDAC3-204ENST00000469207 FIGNL2A6NMB9 653 aa11.31□□□□□ -0.6
HDAC3-204ENST00000469207 CES2O00748 559 aa11.31□□□□□ -0.6
HDAC3-204ENST00000469207 AQP7O14520 342 aa11.31□□□□□ -0.6
HDAC3-204ENST00000469207 BCKDKO14874 412 aa11.31□□□□□ -0.6
HDAC3-204ENST00000469207 PCNAP12004 261 aa11.31□□□□□ -0.6
HDAC3-204ENST00000469207 CD99P14209 185 aa11.31□□□□□ -0.6
HDAC3-204ENST00000469207 CD1EP15812 388 aa11.31□□□□□ -0.6
HDAC3-204ENST00000469207 ZNF10P21506 573 aaPredicted RBP11.31□□□□□ -0.6
HDAC3-204ENST00000469207 CPN2P22792 545 aa11.31□□□□□ -0.6
HDAC3-204ENST00000469207 RPL21P46778 160 aaKnown RBP11.31□□□□□ -0.6
HDAC3-204ENST00000469207 TRPC1P48995 793 aa11.31□□□□□ -0.6
HDAC3-204ENST00000469207 SLC12A2P55011 1212 aa11.31□□□□□ -0.6
HDAC3-204ENST00000469207 IRF8Q02556 426 aa11.31□□□□□ -0.6
HDAC3-204ENST00000469207 FRG1Q14331 258 aaKnown RBP11.31□□□□□ -0.6
HDAC3-204ENST00000469207 PDK4Q16654 411 aa11.31□□□□□ -0.6
HDAC3-204ENST00000469207 ZNF791Q3KP31 576 aaPredicted RBP11.31□□□□□ -0.6
HDAC3-204ENST00000469207 SLC22A10Q63ZE4 541 aa11.31□□□□□ -0.6
HDAC3-204ENST00000469207 C18orf63Q68DL7 685 aa11.31□□□□□ -0.6
HDAC3-204ENST00000469207 OPN5Q6U736 354 aa11.31□□□□□ -0.6
HDAC3-204ENST00000469207 ARSKQ6UWY0 536 aa11.31□□□□□ -0.6
HDAC3-204ENST00000469207 TMEM64Q6YI46 380 aa11.31□□□□□ -0.6
HDAC3-204ENST00000469207 SEM1Q6ZVN7 128 aa11.31□□□□□ -0.6
HDAC3-204ENST00000469207 CLYBLQ8N0X4 340 aa11.31□□□□□ -0.6
HDAC3-204ENST00000469207 GOLM1Q8NBJ4 401 aa11.31□□□□□ -0.6
HDAC3-204ENST00000469207 OR5L2Q8NGL0 311 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms