RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 PSMB5P28074 263 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 MAPK8P45983 427 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 MADCAM1Q13477 382 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 THOC6Q86W42 341 aaKnown RBP11.81□□□□□ -0.52
USP11-206ENST00000469080 ZDHHC13Q8IUH4 622 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 CDH26Q8IXH8 852 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 YIPF7Q8N8F6 280 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 OVCA2Q8WZ82 227 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 SGTBQ96EQ0 304 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 NODALQ96S42 347 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 HOPXQ9BPY8 73 aaPredicted RBP11.81□□□□□ -0.52
USP11-206ENST00000469080 ACPTQ9BZG2 426 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 TRIM45Q9H8W5 580 aaPredicted RBP11.81□□□□□ -0.52
USP11-206ENST00000469080 MIEF1Q9NQG6 463 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 SDR39U1Q9NRG7 319 aaPredicted RBP11.81□□□□□ -0.52
USP11-206ENST00000469080 SLC6A13Q9NSD5 602 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 DOCK8Q8NF50 2099 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 FPGTO14772 594 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 HOXD4P09016 255 aaPredicted RBP11.8□□□□□ -0.52
USP11-206ENST00000469080 TIMP2P16035 220 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 CDKN2CP42773 168 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 SLC15A1P46059 708 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 GP2P55259 537 aaKnown RBP11.8□□□□□ -0.52
USP11-206ENST00000469080 CYP4F3Q08477 520 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 DOC2AQ14183 400 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 SPANXN2Q5MJ10 180 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 TMC8Q8IU68 726 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 RASGEF1AQ8N9B8 481 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 FGF13Q92913 245 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 OTULINQ96BN8 352 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 TRMT2BQ96GJ1 504 aaKnown RBP11.8□□□□□ -0.52
USP11-206ENST00000469080 MAGEB10Q96LZ2 347 aaPredicted RBP11.8□□□□□ -0.52
USP11-206ENST00000469080 ZNF382Q96SR6 550 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 RPP25Q9BUL9 199 aaKnown RBP11.8□□□□□ -0.52
USP11-206ENST00000469080 SLC28A3Q9HAS3 691 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 HPF1Q9NWY4 346 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 SIRT5Q9NXA8 310 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 ING3Q9NXR8 418 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 STOX2Q9P2F5 926 aaPredicted RBP11.8□□□□□ -0.52
USP11-206ENST00000469080 TRPC4Q9UBN4 977 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 DYRK1BQ9Y463 629 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 CCDC88CQ9P219 2028 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 LINC01553A4QN01 128 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 ANXA6P08133 673 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 PCSK2P16519 638 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 AZGP1P25311 298 aaKnown RBP11.8□□□□□ -0.52
USP11-206ENST00000469080 GRK3P35626 688 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 KIR3DL1P43629 444 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 CLCNKAP51800 687 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 MAP2K6P52564 334 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 PPIGQ13427 754 aaKnown RBP eCLIP11.8□□□□□ -0.523e-6■■■□□ 14.8
USP11-206ENST00000469080 DSG2Q14126 1118 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 SLBPQ14493 270 aaKnown RBP eCLIP11.8□□□□□ -0.52
USP11-206ENST00000469080 INTS11Q5TA45 600 aaKnown RBP11.8□□□□□ -0.52
USP11-206ENST00000469080 FRG2Q64ET8 278 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 PAMR1Q6UXH9 720 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 OLIG3Q7RTU3 272 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 SPATA19Q7Z5L4 167 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 DYNC2LI1Q8TCX1 351 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 UTP15Q8TED0 518 aaKnown RBP11.8□□□□□ -0.52
USP11-206ENST00000469080 OR8D1Q8WZ84 308 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 FRG2BQ96QU4 278 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 DCSTAMPQ9H295 470 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 RHCGQ9UBD6 479 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 NOTCH4Q99466 2003 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 PRAMEF33A0A0G2JMD5 474 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 FAM234BA2RU67 622 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 ARHGEF33A8MVX0 844 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 APOC1P02654 83 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 KLK1P06870 262 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 MAP2K4P45985 399 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 ABATP80404 500 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 GRIK2Q13002 908 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 THAP5Q7Z6K1 395 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 ADIPOR2Q86V24 386 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 PLCZ1Q86YW0 608 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 BPIFB1Q8TDL5 484 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 USP7Q93009 1102 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 TMBIM1Q969X1 311 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 LGALS12Q96DT0 336 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 CENPNQ96H22 339 aaPredicted RBP11.8□□□□□ -0.52
USP11-206ENST00000469080 GTPBP2Q9BX10 602 aaKnown RBP11.8□□□□□ -0.52
USP11-206ENST00000469080 PRELID3BQ9Y3B1 194 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 ORC6Q9Y5N6 252 aa11.8□□□□□ -0.52
USP11-206ENST00000469080 SH3D21A4FU49 640 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 GAPDHSO14556 408 aaPredicted RBP11.79□□□□□ -0.52
USP11-206ENST00000469080 ZNF821O75541 412 aaPredicted RBP11.79□□□□□ -0.52
USP11-206ENST00000469080 DNTTP04053 509 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 CYP17A1P05093 508 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 FSHRP23945 695 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 C2orf80Q0P641 193 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 TRAP1Q12931 704 aaKnown RBP11.79□□□□□ -0.52
USP11-206ENST00000469080 CCDC85BQ15834 202 aaPredicted RBP11.79□□□□□ -0.52
USP11-206ENST00000469080 PRAMEF14Q5SWL7 426 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 TANGO2Q6ICL3 276 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 TNFAIP8L2Q6P589 184 aaPredicted RBP11.79□□□□□ -0.52
USP11-206ENST00000469080 C8orf59Q8N0T1 100 aaPredicted RBP11.79□□□□□ -0.52
USP11-206ENST00000469080 MMP21Q8N119 569 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 HDDC3Q8N4P3 179 aa11.79□□□□□ -0.52
USP11-206ENST00000469080 ZNF565Q8N9K5 539 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms