RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 WDSUB1Q8N9V3 476 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 TMEM161BQ8NDZ6 487 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 MCPH1Q8NEM0 835 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 C1orf162Q8NEQ5 155 aaPredicted RBP4.65□□□□□ -1.67
SF3B1-207ENST00000468925 TRPV1Q8NER1 839 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 CYP2W1Q8TAV3 490 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 HMGCLL1Q8TB92 370 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 GLYATL2Q8WU03 294 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 SFT2D1Q8WV19 159 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 TCTEX1D2Q8WW35 142 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 HTR3CQ8WXA8 447 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 ARNTL2Q8WYA1 636 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 RIT1Q92963 219 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 UCN3Q969E3 161 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 RFT1Q96AA3 541 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 SLC25A46Q96AG3 418 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 ISG20Q96AZ6 181 aaKnown RBP4.65□□□□□ -1.67
SF3B1-207ENST00000468925 LENG9Q96B70 501 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 CHFRQ96EP1 664 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 SCRN2Q96FV2 425 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 DIRAS2Q96HU8 199 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 Q96M66 194 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 HS6ST2Q96MM7 605 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 PPP1R16BQ96T49 567 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 AGAP2Q99490 1192 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 ZBTB18Q99592 522 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 SEPHS2Q99611 448 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 PIP5K1AQ99755 562 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 TREX2Q9BQ50 279 aaPredicted RBP4.65□□□□□ -1.67
SF3B1-207ENST00000468925 H2AFJQ9BTM1 129 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 SPATA5L1Q9BVQ7 753 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 ASPNQ9BXN1 380 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 GABARAPL3Q9BY60 117 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 B3GNT5Q9BYG0 378 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 ALOXE3Q9BYJ1 711 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 XYLT2Q9H1B5 865 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 MMP28Q9H239 520 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 ANKRD19PQ9H560 264 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 DHX35Q9H5Z1 703 aaKnown RBP4.65□□□□□ -1.67
SF3B1-207ENST00000468925 DDX31Q9H8H2 851 aaKnown RBP4.65□□□□□ -1.67
SF3B1-207ENST00000468925 AGO4Q9HCK5 861 aaKnown RBP4.65□□□□□ -1.67
SF3B1-207ENST00000468925 PDLIM7Q9NR12 457 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 ACSS2Q9NR19 701 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 DUSP22Q9NRW4 184 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 C19orf12Q9NSK7 152 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 ABCB8Q9NUT2 735 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 DCAF13Q9NV06 445 aaKnown RBP4.65□□□□□ -1.67
SF3B1-207ENST00000468925 C14orf119Q9NWQ9 140 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 PIH1D1Q9NWS0 290 aaKnown RBP4.65□□□□□ -1.67
SF3B1-207ENST00000468925 TREM2Q9NZC2 230 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 AKAP7Q9P0M2 348 aaPredicted RBP4.65□□□□□ -1.67
SF3B1-207ENST00000468925 ARHGAP28Q9P2N2 729 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 POMT2Q9UKY4 750 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 GSTK1Q9Y2Q3 226 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 MED16Q9Y2X0 877 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 NPTNQ9Y639 398 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 STYXL1Q9Y6J8 313 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 CDH10Q9Y6N8 788 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 TAF1LQ8IZX4 1826 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 ZFC3H1O60293 1989 aaKnown RBP4.64□□□□□ -1.67
SF3B1-207ENST00000468925 SCN9AQ15858 1988 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 KAT6AQ92794 2004 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 IGKV6D-41A0A0C4DH26 115 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 LOC100506127A0A0U1RQW1 187 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 ELOVL7A1L3X0 281 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 HYKKA2RU49 373 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 RAB19A4D1S5 217 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 PMS2P1A4D2B8 440 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 ZNF891A8MT65 544 aaPredicted RBP4.64□□□□□ -1.67
SF3B1-207ENST00000468925 LINC00587B1AMM8 73 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 FAM220BPB1ANY3 271 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 K7ERI5 159 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 DNASE2O00115 360 aaPredicted RBP4.64□□□□□ -1.67
SF3B1-207ENST00000468925 CBX4O00257 560 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 PPP6CO00743 305 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 MEIS2O14770 477 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 AZIN1O14977 448 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 ADAMDEC1O15204 470 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 TMEM127O75204 238 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 RP2O75695 350 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 PTBP3O95758 552 aaKnown RBP4.64□□□□□ -1.67
SF3B1-207ENST00000468925 AP2A1O95782 977 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 MLYCDO95822 493 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 TSPAN15O95858 294 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 EGFP01133 1207 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 IGHV2-70P01814 119 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 PIGRP01833 764 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 HMGCRP04035 888 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 CYBBP04839 570 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 G6PDP11413 515 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 ANXA8P13928 327 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 GNSP15586 552 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 TNNI1P19237 187 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 RAB3BP20337 219 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 MAGP20916 626 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 UBA1P22314 1058 aaKnown RBP4.64□□□□□ -1.67
SF3B1-207ENST00000468925 HRH2P25021 359 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 ALDH4A1P30038 563 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 SLC6A1P30531 599 aa4.64□□□□□ -1.67
SF3B1-207ENST00000468925 SLC6A4P31645 630 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms