RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 SUPT3HB4E1H0 165 aa22.7■■□□□ 1.22
PTCH1-210ENST00000468211 SUPT3HO75486 399 aa22.7■■□□□ 1.22
PTCH1-210ENST00000468211 ETHE1O95571 254 aa22.7■■□□□ 1.22
PTCH1-210ENST00000468211 HIST1H1TP22492 207 aaPredicted RBP22.7■■□□□ 1.22
PTCH1-210ENST00000468211 MAGEA4P43358 317 aa22.7■■□□□ 1.22
PTCH1-210ENST00000468211 RCN2Q14257 317 aa22.7■■□□□ 1.22
PTCH1-210ENST00000468211 EMC4Q5J8M3 183 aa22.7■■□□□ 1.22
PTCH1-210ENST00000468211 MED27Q6P2C8 311 aa22.7■■□□□ 1.22
PTCH1-210ENST00000468211 RAPH1Q70E73 1250 aa22.7■■□□□ 1.22
PTCH1-210ENST00000468211 OR4N5Q8IXE1 308 aa22.7■■□□□ 1.22
PTCH1-210ENST00000468211 C17orf53Q8N3J3 647 aaPredicted RBP22.7■■□□□ 1.22
PTCH1-210ENST00000468211 RPRMLQ8N4K4 120 aa22.7■■□□□ 1.22
PTCH1-210ENST00000468211 OR7G3Q8NG95 312 aa22.7■■□□□ 1.22
PTCH1-210ENST00000468211 SLC2A12Q8TD20 617 aa22.7■■□□□ 1.22
PTCH1-210ENST00000468211 UBTD2Q8WUN7 234 aa22.7■■□□□ 1.22
PTCH1-210ENST00000468211 NXNL1Q96CM4 212 aa22.7■■□□□ 1.22
PTCH1-210ENST00000468211 OR51B5Q9H339 312 aa22.7■■□□□ 1.22
PTCH1-210ENST00000468211 NMRAL1Q9HBL8 299 aa22.7■■□□□ 1.22
PTCH1-210ENST00000468211 NCKAP5O14513 1909 aa22.69■■□□□ 1.22
PTCH1-210ENST00000468211 FAM166BA8MTA8 275 aa22.69■■□□□ 1.22
PTCH1-210ENST00000468211 KERAO60938 352 aa22.69■■□□□ 1.22
PTCH1-210ENST00000468211 SCELO95171 688 aa22.69■■□□□ 1.22
PTCH1-210ENST00000468211 MTHFD2P13995 350 aa22.69■■□□□ 1.22
PTCH1-210ENST00000468211 TNNI3P19429 210 aa22.69■■□□□ 1.22
PTCH1-210ENST00000468211 KRTAP10-9P60411 292 aa22.69■■□□□ 1.22
PTCH1-210ENST00000468211 RNF4P78317 190 aa22.69■■□□□ 1.22
PTCH1-210ENST00000468211 IRF9Q00978 393 aa22.69■■□□□ 1.22
PTCH1-210ENST00000468211 CEP128Q6ZU80 1094 aa22.69■■□□□ 1.22
PTCH1-210ENST00000468211 GPALPP1Q8IXQ4 340 aa22.69■■□□□ 1.22
PTCH1-210ENST00000468211 ACBD4Q8NC06 268 aa22.69■■□□□ 1.22
PTCH1-210ENST00000468211 SRFBP1Q8NEF9 429 aaKnown RBP22.69■■□□□ 1.22
PTCH1-210ENST00000468211 ZNF721Q8TF20 911 aa22.69■■□□□ 1.22
PTCH1-210ENST00000468211 SCYL1Q96KG9 808 aa22.69■■□□□ 1.22
PTCH1-210ENST00000468211 ROGDIQ9GZN7 287 aa22.69■■□□□ 1.22
PTCH1-210ENST00000468211 OPTCQ9UBM4 332 aa22.69■■□□□ 1.22
PTCH1-210ENST00000468211 INTS1Q8N201 2190 aaKnown RBP22.68■■□□□ 1.22
PTCH1-210ENST00000468211 K7EPI3 171 aa22.68■■□□□ 1.22
PTCH1-210ENST00000468211 FGF17O60258 216 aa22.68■■□□□ 1.22
PTCH1-210ENST00000468211 LTA4HP09960 611 aaKnown RBP22.68■■□□□ 1.22
PTCH1-210ENST00000468211 PPIAP62937 165 aaKnown RBP22.68■■□□□ 1.22
PTCH1-210ENST00000468211 GUCY2DQ02846 1103 aa22.68■■□□□ 1.22
PTCH1-210ENST00000468211 PCDH1Q08174 1060 aa22.68■■□□□ 1.22
PTCH1-210ENST00000468211 SERTAD2Q14140 314 aa22.68■■□□□ 1.22
PTCH1-210ENST00000468211 TMEM35AQ53FP2 167 aa22.68■■□□□ 1.22
PTCH1-210ENST00000468211 KHDRBS2Q5VWX1 349 aaKnown RBP22.68■■□□□ 1.22
PTCH1-210ENST00000468211 DGAT2L6Q6ZPD8 337 aa22.68■■□□□ 1.22
PTCH1-210ENST00000468211 TBC1D1Q86TI0 1168 aaPredicted RBP22.68■■□□□ 1.22
PTCH1-210ENST00000468211 CENPLQ8N0S6 344 aaPredicted RBP22.68■■□□□ 1.22
PTCH1-210ENST00000468211 CA5BP1Q8WTZ4 195 aa22.68■■□□□ 1.22
PTCH1-210ENST00000468211 KCTD4Q8WVF5 259 aa22.68■■□□□ 1.22
PTCH1-210ENST00000468211 PHACTR1Q9C0D0 580 aa22.68■■□□□ 1.22
PTCH1-210ENST00000468211 ENKD1Q9H0I2 346 aa22.68■■□□□ 1.22
PTCH1-210ENST00000468211 CCDC168Q8NDH2 2452 aa22.68■■□□□ 1.22
PTCH1-210ENST00000468211 CELSR1Q9NYQ6 3014 aa22.68■■□□□ 1.22
PTCH1-210ENST00000468211 HMX2A2RU54 273 aa22.67■■□□□ 1.22
PTCH1-210ENST00000468211 SYNDIG1LA6NDD5 238 aa22.67■■□□□ 1.22
PTCH1-210ENST00000468211 CPN2P22792 545 aa22.67■■□□□ 1.22
PTCH1-210ENST00000468211 CRABP2P29373 138 aa22.67■■□□□ 1.22
PTCH1-210ENST00000468211 SSR2P43308 183 aa22.67■■□□□ 1.22
PTCH1-210ENST00000468211 IGLV3-21P80748 117 aaPredicted RBP22.67■■□□□ 1.22
PTCH1-210ENST00000468211 DDX39BQ13838 428 aaKnown RBP22.67■■□□□ 1.22
PTCH1-210ENST00000468211 AP5B1Q2VPB7 878 aa22.67■■□□□ 1.22
PTCH1-210ENST00000468211 DEPDC1Q5TB30 811 aa22.67■■□□□ 1.22
PTCH1-210ENST00000468211 ARHGAP11AQ6P4F7 1023 aa22.67■■□□□ 1.22
PTCH1-210ENST00000468211 HUS1BQ8NHY5 278 aa22.67■■□□□ 1.22
PTCH1-210ENST00000468211 DOK4Q8TEW6 326 aa22.67■■□□□ 1.22
PTCH1-210ENST00000468211 UBE2E3Q969T4 207 aa22.67■■□□□ 1.22
PTCH1-210ENST00000468211 TTTY12Q9BZ98 90 aa22.67■■□□□ 1.22
PTCH1-210ENST00000468211 ZDHHC11Q9H8X9 412 aa22.67■■□□□ 1.22
PTCH1-210ENST00000468211 PRM3Q9NNZ6 103 aa22.67■■□□□ 1.22
PTCH1-210ENST00000468211 UTP11Q9Y3A2 253 aaKnown RBP22.67■■□□□ 1.22
PTCH1-210ENST00000468211 LIPGQ9Y5X9 500 aa22.67■■□□□ 1.22
PTCH1-210ENST00000468211 LRRC14BA6NHZ5 514 aa22.66■■□□□ 1.22
PTCH1-210ENST00000468211 HRKO00198 91 aa22.66■■□□□ 1.22
PTCH1-210ENST00000468211 PRKRAO75569 313 aaKnown RBP22.66■■□□□ 1.22
PTCH1-210ENST00000468211 STX2P32856 288 aa22.66■■□□□ 1.22
PTCH1-210ENST00000468211 PLGLB1Q02325 96 aa22.66■■□□□ 1.22
PTCH1-210ENST00000468211 SLAMF1Q13291 335 aa22.66■■□□□ 1.22
PTCH1-210ENST00000468211 OR4C11Q6IEV9 310 aa22.66■■□□□ 1.22
PTCH1-210ENST00000468211 GRHL2Q6ISB3 625 aa22.66■■□□□ 1.22
PTCH1-210ENST00000468211 RTL4Q6ZR62 310 aa22.66■■□□□ 1.22
PTCH1-210ENST00000468211 CHSY3Q70JA7 882 aa22.66■■□□□ 1.22
PTCH1-210ENST00000468211 EID3Q8N140 333 aa22.66■■□□□ 1.22
PTCH1-210ENST00000468211 TEX9Q8N6V9 391 aa22.66■■□□□ 1.22
PTCH1-210ENST00000468211 OR8K3Q8NH51 312 aa22.66■■□□□ 1.22
PTCH1-210ENST00000468211 PPWD1Q96BP3 646 aaKnown RBP22.66■■□□□ 1.22
PTCH1-210ENST00000468211 MRRFQ96E11 262 aaKnown RBP22.66■■□□□ 1.22
PTCH1-210ENST00000468211 CMTM7Q96FZ5 175 aa22.66■■□□□ 1.22
PTCH1-210ENST00000468211 SPOCK3Q9BQ16 436 aa22.66■■□□□ 1.22
PTCH1-210ENST00000468211 PLPP1O14494 284 aa22.65■■□□□ 1.22
PTCH1-210ENST00000468211 GLSO94925 669 aaPredicted RBP22.65■■□□□ 1.22
PTCH1-210ENST00000468211 CNR1P21554 472 aa22.65■■□□□ 1.22
PTCH1-210ENST00000468211 CAV1Q03135 178 aa22.65■■□□□ 1.22
PTCH1-210ENST00000468211 UBAP2Q5T6F2 1119 aaKnown RBP22.65■■□□□ 1.22
PTCH1-210ENST00000468211 C18orf63Q68DL7 685 aa22.65■■□□□ 1.22
PTCH1-210ENST00000468211 SENP5Q96HI0 755 aaPredicted RBP22.65■■□□□ 1.22
PTCH1-210ENST00000468211 MTERF1Q99551 399 aaKnown RBP22.65■■□□□ 1.22
PTCH1-210ENST00000468211 TP63Q9H3D4 680 aaPredicted RBP22.65■■□□□ 1.22
PTCH1-210ENST00000468211 DMRT3Q9NQL9 472 aa22.65■■□□□ 1.22
PTCH1-210ENST00000468211 COQ3Q9NZJ6 369 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms