RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 HEXBP07686 556 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 G6PDP11413 515 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 LIFP15018 202 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 DDX5P17844 614 aaKnown RBP14.31□□□□□ -0.12
SNIP1-202ENST00000468040 DDCP20711 480 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 PRPS1L1P21108 318 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 DRD4P21917 467 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 RPL3P39023 403 aaKnown RBP14.31□□□□□ -0.12
SNIP1-202ENST00000468040 ALDH9A1P49189 494 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 EMP2P54851 167 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 DIO3P55073 304 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 C2orf80Q0P641 193 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 SLC13A2Q13183 592 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 ERV3-1Q14264 604 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 GSTA3Q16772 222 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 METTL21CQ5VZV1 264 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 FAM71E1Q6IPT2 247 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 SHISA6Q6ZSJ9 500 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 SPATA21Q7Z572 469 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 CLNKQ7Z7G1 428 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 LAPTM4BQ86VI4 370 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 SHISA5Q8N114 240 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 STARD8Q92502 1023 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 NACC2Q96BF6 587 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 NAF1Q96HR8 494 aaKnown RBP14.31□□□□□ -0.12
SNIP1-202ENST00000468040 VN1R1Q9GZP7 353 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 MIEF1Q9NQG6 463 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 BAIAP2L1Q9UHR4 511 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 C3orf18Q9UK00 162 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 PSME2Q9UL46 239 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 NUP210LQ5VU65 1888 aa14.31□□□□□ -0.12
SNIP1-202ENST00000468040 TMEM8BA6NDV4 472 aa14.3□□□□□ -0.12
SNIP1-202ENST00000468040 C1QTNF9BB2RNN3 333 aa14.3□□□□□ -0.12
SNIP1-202ENST00000468040 E9PBE3 544 aa14.3□□□□□ -0.12
SNIP1-202ENST00000468040 KLK10O43240 276 aa14.3□□□□□ -0.12
SNIP1-202ENST00000468040 KLHL41O60662 606 aa14.3□□□□□ -0.12
SNIP1-202ENST00000468040 PRKRAO75569 313 aaKnown RBP14.3□□□□□ -0.12
SNIP1-202ENST00000468040 ALDOCP09972 364 aaKnown RBP14.3□□□□□ -0.12
SNIP1-202ENST00000468040 C1QTNF9P0C862 333 aa14.3□□□□□ -0.12
SNIP1-202ENST00000468040 F8A1P23610 371 aa14.3□□□□□ -0.12
SNIP1-202ENST00000468040 HPCAL1P37235 193 aa14.3□□□□□ -0.12
SNIP1-202ENST00000468040 HNRNPFP52597 415 aaKnown RBP14.3□□□□□ -0.12
SNIP1-202ENST00000468040 FOXK2Q01167 660 aa14.3□□□□□ -0.12
SNIP1-202ENST00000468040 RHAGQ02094 409 aa14.3□□□□□ -0.12
SNIP1-202ENST00000468040 ACTN3Q08043 901 aaPredicted RBP14.3□□□□□ -0.12
SNIP1-202ENST00000468040 SSPNQ14714 243 aa14.3□□□□□ -0.12
SNIP1-202ENST00000468040 PTGR1Q14914 329 aa14.3□□□□□ -0.12
SNIP1-202ENST00000468040 RPS6KA2Q15349 733 aa14.3□□□□□ -0.12
SNIP1-202ENST00000468040 SLC48A1Q6P1K1 146 aa14.3□□□□□ -0.12
SNIP1-202ENST00000468040 R3HCC1LQ7Z5L2 792 aaKnown RBP14.3□□□□□ -0.12
SNIP1-202ENST00000468040 VASH2Q86V25 355 aa14.3□□□□□ -0.12
SNIP1-202ENST00000468040 SCUBE1Q8IWY4 988 aa14.3□□□□□ -0.12
SNIP1-202ENST00000468040 TMEM52Q8NDY8 209 aa14.3□□□□□ -0.12
SNIP1-202ENST00000468040 PLPP5Q8NEB5 264 aa14.3□□□□□ -0.12
SNIP1-202ENST00000468040 CLHC1Q8NHS4 586 aa14.3□□□□□ -0.12
SNIP1-202ENST00000468040 METTL21AQ8WXB1 218 aa14.3□□□□□ -0.12
SNIP1-202ENST00000468040 MTERF3Q96E29 417 aa14.3□□□□□ -0.12
SNIP1-202ENST00000468040 ZNF764Q96H86 408 aaPredicted RBP14.3□□□□□ -0.12
SNIP1-202ENST00000468040 EGLN2Q96KS0 407 aa14.3□□□□□ -0.12
SNIP1-202ENST00000468040 PTCHD1Q96NR3 888 aa14.3□□□□□ -0.12
SNIP1-202ENST00000468040 ELAC2Q9BQ52 826 aaKnown RBP14.3□□□□□ -0.12
SNIP1-202ENST00000468040 BRINP2Q9C0B6 783 aa14.3□□□□□ -0.12
SNIP1-202ENST00000468040 REEP4Q9H6H4 257 aa14.3□□□□□ -0.12
SNIP1-202ENST00000468040 GPR45Q9Y5Y3 372 aa14.3□□□□□ -0.12
SNIP1-202ENST00000468040 AHCTF1Q8WYP5 2266 aa14.3□□□□□ -0.12
SNIP1-202ENST00000468040 WDFY3Q8IZQ1 3526 aa14.29□□□□□ -0.12
SNIP1-202ENST00000468040 GLOD5A6NK44 160 aa14.29□□□□□ -0.12
SNIP1-202ENST00000468040 SNX3O60493 162 aa14.29□□□□□ -0.12
SNIP1-202ENST00000468040 ALOX12BO75342 701 aa14.29□□□□□ -0.12
SNIP1-202ENST00000468040 CREG1O75629 220 aa14.29□□□□□ -0.12
SNIP1-202ENST00000468040 RECKO95980 971 aa14.29□□□□□ -0.12
SNIP1-202ENST00000468040 UMODP07911 640 aa14.29□□□□□ -0.12
SNIP1-202ENST00000468040 FURINP09958 794 aa14.29□□□□□ -0.12
SNIP1-202ENST00000468040 C8orf89P0DMQ9 161 aa14.29□□□□□ -0.12
SNIP1-202ENST00000468040 MMP11P24347 488 aa14.29□□□□□ -0.12
SNIP1-202ENST00000468040 PIK3R1P27986 724 aa14.29□□□□□ -0.12
SNIP1-202ENST00000468040 EIF2S3P41091 472 aaKnown RBP14.29□□□□□ -0.12
SNIP1-202ENST00000468040 CLDN8P56748 225 aa14.29□□□□□ -0.12
SNIP1-202ENST00000468040 C21orf58P58505 322 aa14.29□□□□□ -0.12
SNIP1-202ENST00000468040 STX1BP61266 288 aa14.29□□□□□ -0.12
SNIP1-202ENST00000468040 RPS18P62269 152 aaKnown RBP14.29□□□□□ -0.12
SNIP1-202ENST00000468040 BTG2P78543 158 aa14.29□□□□□ -0.12
SNIP1-202ENST00000468040 MC1RQ01726 317 aa14.29□□□□□ -0.12
SNIP1-202ENST00000468040 FOLH1Q04609 750 aa14.29□□□□□ -0.12
SNIP1-202ENST00000468040 STX4Q12846 297 aa14.29□□□□□ -0.12
SNIP1-202ENST00000468040 BIKQ13323 160 aa14.29□□□□□ -0.12
SNIP1-202ENST00000468040 SERTAD2Q14140 314 aa14.29□□□□□ -0.12
SNIP1-202ENST00000468040 NSDHLQ15738 373 aa14.29□□□□□ -0.12
SNIP1-202ENST00000468040 TMEM198Q66K66 360 aa14.29□□□□□ -0.12
SNIP1-202ENST00000468040 SAMD14Q8IZD0 417 aaPredicted RBP14.29□□□□□ -0.12
SNIP1-202ENST00000468040 DNAJB14Q8TBM8 379 aa14.29□□□□□ -0.12
SNIP1-202ENST00000468040 C10orf82Q8WW14 230 aa14.29□□□□□ -0.12
SNIP1-202ENST00000468040 VPS50Q96JG6 964 aa14.29□□□□□ -0.12
SNIP1-202ENST00000468040 SLC45A3Q96JT2 553 aa14.29□□□□□ -0.12
SNIP1-202ENST00000468040 CCNL2Q96S94 520 aaPredicted RBP14.29□□□□□ -0.12
SNIP1-202ENST00000468040 PRPF18Q99633 342 aaKnown RBP14.29□□□□□ -0.12
SNIP1-202ENST00000468040 DPY30Q9C005 99 aa14.29□□□□□ -0.12
SNIP1-202ENST00000468040 SDR39U1Q9NRG7 319 aaPredicted RBP14.29□□□□□ -0.12
SNIP1-202ENST00000468040 MRGBPQ9NV56 204 aa14.29□□□□□ -0.12
SNIP1-202ENST00000468040 HEY2Q9UBP5 337 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms