RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 SLAMF1Q13291 335 aa13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 RCN2Q14257 317 aa13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 UNC50Q53HI1 259 aa13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 KRTCAP3Q53RY4 240 aa13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 SGO1Q5FBB7 561 aa13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 ZNF766Q5HY98 468 aa13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 C1QL3Q5VWW1 255 aa13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 FCRLBQ6BAA4 426 aa13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 SP5Q6BEB4 398 aaPredicted RBP13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 WDR93Q6P2C0 686 aa13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 CLNKQ7Z7G1 428 aa13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 ZNF595Q8IYB9 648 aa13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 WDR20Q8TBZ3 569 aa13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 ZNF483Q8TF39 744 aaPredicted RBP13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 PARD6BQ9BYG5 372 aa13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 CHST11Q9NPF2 352 aa13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 KCMF1Q9P0J7 381 aa13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 TSC22D4Q9Y3Q8 395 aa13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 MMACHCQ9Y4U1 282 aa13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 SPACA6W5XKT8 324 aa13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 CROCCQ5TZA2 2017 aa13.15□□□□□ -0.3
CCHCR1-211ENST00000467553 TCRBV16S1A1N1A0A5B0 115 aa13.14□□□□□ -0.31
CCHCR1-211ENST00000467553 CYR61O00622 381 aa13.14□□□□□ -0.31
CCHCR1-211ENST00000467553 GLRA3O75311 464 aa13.14□□□□□ -0.31
CCHCR1-211ENST00000467553 OTCP00480 354 aa13.14□□□□□ -0.31
CCHCR1-211ENST00000467553 IMPDH1P20839 514 aa13.14□□□□□ -0.31
CCHCR1-211ENST00000467553 AGAP20933 346 aa13.14□□□□□ -0.31
CCHCR1-211ENST00000467553 CPN2P22792 545 aa13.14□□□□□ -0.31
CCHCR1-211ENST00000467553 HSD17B7P56937 341 aa13.14□□□□□ -0.31
CCHCR1-211ENST00000467553 SLC26A5P58743 744 aa13.14□□□□□ -0.31
CCHCR1-211ENST00000467553 TAS2R50P59544 299 aa13.14□□□□□ -0.31
CCHCR1-211ENST00000467553 HERVK_113P63132 956 aa13.14□□□□□ -0.31
CCHCR1-211ENST00000467553 IFT88Q13099 833 aa13.14□□□□□ -0.31
CCHCR1-211ENST00000467553 TRAF3Q13114 568 aa13.14□□□□□ -0.31
CCHCR1-211ENST00000467553 ACER2Q5QJU3 275 aa13.14□□□□□ -0.31
CCHCR1-211ENST00000467553 ZNF678Q5SXM1 525 aa13.14□□□□□ -0.31
CCHCR1-211ENST00000467553 FRG2Q64ET8 278 aa13.14□□□□□ -0.31
CCHCR1-211ENST00000467553 SLC22A9Q8IVM8 553 aa13.14□□□□□ -0.31
CCHCR1-211ENST00000467553 C4orf33Q8N1A6 199 aa13.14□□□□□ -0.31
CCHCR1-211ENST00000467553 ZNF808Q8N4W9 903 aaPredicted RBP13.14□□□□□ -0.31
CCHCR1-211ENST00000467553 SLC5A8Q8N695 610 aa13.14□□□□□ -0.31
CCHCR1-211ENST00000467553 CCDC63Q8NA47 563 aa13.14□□□□□ -0.31
CCHCR1-211ENST00000467553 ADAMTS18Q8TE60 1221 aa13.14□□□□□ -0.31
CCHCR1-211ENST00000467553 AENQ8WTP8 325 aaKnown RBP13.14□□□□□ -0.31
CCHCR1-211ENST00000467553 THAP3Q8WTV1 239 aaPredicted RBP13.14□□□□□ -0.31
CCHCR1-211ENST00000467553 MARVELD3Q96A59 401 aa13.14□□□□□ -0.31
CCHCR1-211ENST00000467553 FRG2BQ96QU4 278 aa13.14□□□□□ -0.31
CCHCR1-211ENST00000467553 CSF3RQ99062 836 aa13.14□□□□□ -0.31
CCHCR1-211ENST00000467553 UTP23Q9BRU9 249 aaKnown RBP13.14□□□□□ -0.31
CCHCR1-211ENST00000467553 ERVK-6Q9BXR3 956 aa13.14□□□□□ -0.31
CCHCR1-211ENST00000467553 LYRM4Q9HD34 91 aa13.14□□□□□ -0.31
CCHCR1-211ENST00000467553 GRID1Q9ULK0 1009 aa13.14□□□□□ -0.31
CCHCR1-211ENST00000467553 CSMD1Q96PZ7 3565 aa13.14□□□□□ -0.31
CCHCR1-211ENST00000467553 A0A1B0GTL3 188 aa13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 TGFBR3LH3BV60 316 aa13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 FOXE1O00358 373 aaPredicted RBP13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 PLPP1O14494 284 aa13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 COPEO14579 308 aa13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 CTNSO60931 367 aa13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 OR4F21O95013 312 aa13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 UNC5CO95185 931 aa13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 ETHE1O95571 254 aa13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 IFNA16P05015 189 aa13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 MYL2P10916 166 aa13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 CD46P15529 392 aa13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 KRT4P19013 534 aa13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 CA7P43166 264 aa13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 ST13P50502 369 aaKnown RBP13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 PRKAA2P54646 552 aa13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 KCNK10P57789 538 aa13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 RASA2Q15283 850 aa13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 LETMD1Q6P1Q0 360 aa13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 EMBQ6PCB8 327 aa13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 XKRXQ6PP77 449 aa13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 CYP20A1Q6UW02 462 aa13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 SH2D5Q6ZV89 423 aa13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 SCUBE1Q8IWY4 988 aa13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 TMEM178AQ8NBL3 297 aa13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 FAM98AQ8NCA5 519 aaKnown RBP13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 TMEM237Q96Q45 408 aa13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 SERPINI1Q99574 410 aa13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 C1QTNF3Q9BXJ4 246 aa13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 ALOXE3Q9BYJ1 711 aa13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 C12orf65Q9H3J6 166 aaKnown RBP13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 ELOVL6Q9H5J4 265 aa13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 PSD3Q9NYI0 1048 aa13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 EMCNQ9ULC0 261 aa13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 APCP25054 2843 aa13.13□□□□□ -0.31
CCHCR1-211ENST00000467553 IGKV3D-11A0A0A0MRZ8 115 aa13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 TRGV8A0A0C4DH27 118 aa13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 SAGE2PA6NJ88 616 aa13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 PRSS44E7EML9 344 aa13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 LDB3O75112 727 aa13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 EEDO75530 441 aaKnown RBP13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 MYO1DO94832 1006 aa13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 NUDT17P0C025 328 aa13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 TNNI3P19429 210 aa13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 PPP2R1BP30154 601 aa13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 TLX1P31314 330 aaPredicted RBP13.12□□□□□ -0.31
CCHCR1-211ENST00000467553 CRHR1P34998 444 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms