RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 IGLV3-21P80748 117 aaPredicted RBP14.29□□□□□ -0.12
NPHP4-205ENST00000466897 RHAGQ02094 409 aa14.29□□□□□ -0.12
NPHP4-205ENST00000466897 BIKQ13323 160 aa14.29□□□□□ -0.12
NPHP4-205ENST00000466897 TGIF1Q15583 401 aa14.29□□□□□ -0.12
NPHP4-205ENST00000466897 C18orf63Q68DL7 685 aa14.29□□□□□ -0.12
NPHP4-205ENST00000466897 NXNQ6DKJ4 435 aa14.29□□□□□ -0.12
NPHP4-205ENST00000466897 FAM47BQ8NA70 645 aa14.29□□□□□ -0.12
NPHP4-205ENST00000466897 DNAJB14Q8TBM8 379 aa14.29□□□□□ -0.12
NPHP4-205ENST00000466897 C10orf82Q8WW14 230 aa14.29□□□□□ -0.12
NPHP4-205ENST00000466897 STARD8Q92502 1023 aa14.29□□□□□ -0.12
NPHP4-205ENST00000466897 C1orf50Q9BV19 199 aa14.29□□□□□ -0.12
NPHP4-205ENST00000466897 TMEM120AQ9BXJ8 343 aa14.29□□□□□ -0.12
NPHP4-205ENST00000466897 VN1R1Q9GZP7 353 aa14.29□□□□□ -0.12
NPHP4-205ENST00000466897 ACTL8Q9H568 366 aa14.29□□□□□ -0.12
NPHP4-205ENST00000466897 TAS2R7Q9NYW3 318 aa14.29□□□□□ -0.12
NPHP4-205ENST00000466897 TRIM33Q9UPN9 1127 aa14.29□□□□□ -0.12
NPHP4-205ENST00000466897 PTRH2Q9Y3E5 179 aaKnown RBP14.29□□□□□ -0.12
NPHP4-205ENST00000466897 GPR45Q9Y5Y3 372 aa14.29□□□□□ -0.12
NPHP4-205ENST00000466897 CEP295Q9C0D2 2601 aa14.29□□□□□ -0.12
NPHP4-205ENST00000466897 A0A1W2PQ72 361 aa14.28□□□□□ -0.12
NPHP4-205ENST00000466897 IDSB3KWA1 339 aa14.28□□□□□ -0.12
NPHP4-205ENST00000466897 FAM227AF5H4B4 570 aa14.28□□□□□ -0.12
NPHP4-205ENST00000466897 UBDO15205 165 aa14.28□□□□□ -0.12
NPHP4-205ENST00000466897 JRKO75564 520 aa14.28□□□□□ -0.12
NPHP4-205ENST00000466897 UMODP07911 640 aa14.28□□□□□ -0.12
NPHP4-205ENST00000466897 G6PDP11413 515 aa14.28□□□□□ -0.12
NPHP4-205ENST00000466897 LIFP15018 202 aa14.28□□□□□ -0.12
NPHP4-205ENST00000466897 DDX5P17844 614 aaKnown RBP14.28□□□□□ -0.12
NPHP4-205ENST00000466897 PRPS1L1P21108 318 aa14.28□□□□□ -0.12
NPHP4-205ENST00000466897 F8A1P23610 371 aa14.28□□□□□ -0.12
NPHP4-205ENST00000466897 EIF2S3P41091 472 aaKnown RBP14.28□□□□□ -0.12
NPHP4-205ENST00000466897 HNRNPFP52597 415 aaKnown RBP14.28□□□□□ -0.12
NPHP4-205ENST00000466897 ARFIP2P53365 341 aa14.28□□□□□ -0.12
NPHP4-205ENST00000466897 DIO3P55073 304 aa14.28□□□□□ -0.12
NPHP4-205ENST00000466897 CLDN8P56748 225 aa14.28□□□□□ -0.12
NPHP4-205ENST00000466897 PDE7AQ13946 482 aa14.28□□□□□ -0.12
NPHP4-205ENST00000466897 SSPNQ14714 243 aa14.28□□□□□ -0.12
NPHP4-205ENST00000466897 SLC48A1Q6P1K1 146 aa14.28□□□□□ -0.12
NPHP4-205ENST00000466897 TMEM205Q6UW68 189 aa14.28□□□□□ -0.12
NPHP4-205ENST00000466897 SPATA21Q7Z572 469 aa14.28□□□□□ -0.12
NPHP4-205ENST00000466897 CPLX4Q7Z7G2 160 aa14.28□□□□□ -0.12
NPHP4-205ENST00000466897 LAPTM4BQ86VI4 370 aa14.28□□□□□ -0.12
NPHP4-205ENST00000466897 SAMD14Q8IZD0 417 aaPredicted RBP14.28□□□□□ -0.12
NPHP4-205ENST00000466897 SHISA5Q8N114 240 aa14.28□□□□□ -0.12
NPHP4-205ENST00000466897 TMEM52Q8NDY8 209 aa14.28□□□□□ -0.12
NPHP4-205ENST00000466897 THOC1Q96FV9 657 aaKnown RBP14.28□□□□□ -0.12
NPHP4-205ENST00000466897 SLC45A3Q96JT2 553 aa14.28□□□□□ -0.12
NPHP4-205ENST00000466897 EGLN2Q96KS0 407 aa14.28□□□□□ -0.12
NPHP4-205ENST00000466897 TSSK3Q96PN8 268 aa14.28□□□□□ -0.12
NPHP4-205ENST00000466897 CRB3Q9BUF7 120 aa14.28□□□□□ -0.12
NPHP4-205ENST00000466897 SOX17Q9H6I2 414 aaPredicted RBP14.28□□□□□ -0.12
NPHP4-205ENST00000466897 PRTFDC1Q9NRG1 225 aa14.28□□□□□ -0.12
NPHP4-205ENST00000466897 SDR39U1Q9NRG7 319 aaPredicted RBP14.28□□□□□ -0.12
NPHP4-205ENST00000466897 TMEM45AQ9NWC5 275 aa14.28□□□□□ -0.12
NPHP4-205ENST00000466897 C3orf18Q9UK00 162 aa14.28□□□□□ -0.12
NPHP4-205ENST00000466897 CES1P1Q9UKY3 287 aa14.28□□□□□ -0.12
NPHP4-205ENST00000466897 PSME2Q9UL46 239 aa14.28□□□□□ -0.12
NPHP4-205ENST00000466897 MKL2Q9ULH7 1088 aa14.28□□□□□ -0.12
NPHP4-205ENST00000466897 EXO1Q9UQ84 846 aaKnown RBP14.28□□□□□ -0.12
NPHP4-205ENST00000466897 CLDN16Q9Y5I7 305 aa14.28□□□□□ -0.12
NPHP4-205ENST00000466897 LOC102723996A0A087X1L8 192 aa14.27□□□□□ -0.13
NPHP4-205ENST00000466897 ANKRD28O15084 1053 aa14.27□□□□□ -0.13
NPHP4-205ENST00000466897 SNX3O60493 162 aa14.27□□□□□ -0.13
NPHP4-205ENST00000466897 B4GALT2O60909 372 aa14.27□□□□□ -0.13
NPHP4-205ENST00000466897 CREG1O75629 220 aa14.27□□□□□ -0.13
NPHP4-205ENST00000466897 HEXBP07686 556 aa14.27□□□□□ -0.13
NPHP4-205ENST00000466897 FURINP09958 794 aa14.27□□□□□ -0.13
NPHP4-205ENST00000466897 MMP11P24347 488 aa14.27□□□□□ -0.13
NPHP4-205ENST00000466897 HPCAL1P37235 193 aa14.27□□□□□ -0.13
NPHP4-205ENST00000466897 ATP4BP51164 291 aa14.27□□□□□ -0.13
NPHP4-205ENST00000466897 EMP2P54851 167 aa14.27□□□□□ -0.13
NPHP4-205ENST00000466897 C2orf80Q0P641 193 aa14.27□□□□□ -0.13
NPHP4-205ENST00000466897 SERTAD2Q14140 314 aa14.27□□□□□ -0.13
NPHP4-205ENST00000466897 PTGR1Q14914 329 aa14.27□□□□□ -0.13
NPHP4-205ENST00000466897 CEBPEQ15744 281 aa14.27□□□□□ -0.13
NPHP4-205ENST00000466897 MINDY4Q4G0A6 757 aa14.27□□□□□ -0.13
NPHP4-205ENST00000466897 PDCD4Q53EL6 469 aaKnown RBP14.27□□□□□ -0.13
NPHP4-205ENST00000466897 R3HCC1LQ7Z5L2 792 aaKnown RBP14.27□□□□□ -0.13
NPHP4-205ENST00000466897 CAMKMTQ7Z624 323 aa14.27□□□□□ -0.13
NPHP4-205ENST00000466897 RIMKLAQ8IXN7 391 aa14.27□□□□□ -0.13
NPHP4-205ENST00000466897 RBCK1Q9BYM8 510 aa14.27□□□□□ -0.13
NPHP4-205ENST00000466897 REEP4Q9H6H4 257 aa14.27□□□□□ -0.13
NPHP4-205ENST00000466897 HEY2Q9UBP5 337 aa14.27□□□□□ -0.13
NPHP4-205ENST00000466897 ATP6V1HQ9UI12 483 aa14.27□□□□□ -0.13
NPHP4-205ENST00000466897 TCRBV16S1A1N1A0A5B0 115 aa14.26□□□□□ -0.13
NPHP4-205ENST00000466897 C1QTNF9BB2RNN3 333 aa14.26□□□□□ -0.13
NPHP4-205ENST00000466897 E9PBE3 544 aa14.26□□□□□ -0.13
NPHP4-205ENST00000466897 SCAMP2O15127 329 aaKnown RBP14.26□□□□□ -0.13
NPHP4-205ENST00000466897 PGRMC2O15173 223 aa14.26□□□□□ -0.13
NPHP4-205ENST00000466897 RRP8O43159 456 aaKnown RBP14.26□□□□□ -0.13
NPHP4-205ENST00000466897 KLHL41O60662 606 aa14.26□□□□□ -0.13
NPHP4-205ENST00000466897 ALOX12BO75342 701 aa14.26□□□□□ -0.13
NPHP4-205ENST00000466897 PRKRAO75569 313 aaKnown RBP14.26□□□□□ -0.13
NPHP4-205ENST00000466897 CDC123O75794 336 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-205ENST00000466897 GPR75O95800 540 aa14.26□□□□□ -0.13
NPHP4-205ENST00000466897 FAM107AO95990 144 aa14.26□□□□□ -0.13
NPHP4-205ENST00000466897 C1QTNF9P0C862 333 aa14.26□□□□□ -0.13
NPHP4-205ENST00000466897 EFNA3P52797 238 aa14.26□□□□□ -0.13
NPHP4-205ENST00000466897 CLNS1AP54105 237 aaKnown RBP14.26□□□□□ -0.13
NPHP4-205ENST00000466897 MC1RQ01726 317 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms