RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 BSNQ9UPA5 3926 aa13.6□□□□□ -0.23
SQSTM1-205ENST00000464493 SYNDIG1LA6NDD5 238 aa13.6□□□□□ -0.23
SQSTM1-205ENST00000464493 TGFBR3LH3BV60 316 aa13.6□□□□□ -0.23
SQSTM1-205ENST00000464493 LDB3O75112 727 aa13.6□□□□□ -0.23
SQSTM1-205ENST00000464493 CHEK2O96017 543 aa13.6□□□□□ -0.23
SQSTM1-205ENST00000464493 SERPINE1P05121 402 aa13.6□□□□□ -0.23
SQSTM1-205ENST00000464493 PRR35P0CG20 571 aa13.6□□□□□ -0.23
SQSTM1-205ENST00000464493 NEFHP12036 1026 aa13.6□□□□□ -0.23
SQSTM1-205ENST00000464493 ARRB2P32121 409 aa13.6□□□□□ -0.23
SQSTM1-205ENST00000464493 MAPK12P53778 367 aa13.6□□□□□ -0.23
SQSTM1-205ENST00000464493 AP2B1P63010 937 aa13.6□□□□□ -0.23
SQSTM1-205ENST00000464493 BTKQ06187 659 aa13.6□□□□□ -0.23
SQSTM1-205ENST00000464493 EXT1Q16394 746 aa13.6□□□□□ -0.23
SQSTM1-205ENST00000464493 IMPG1Q17R60 797 aa13.6□□□□□ -0.23
SQSTM1-205ENST00000464493 BTBD16Q32M84 506 aa13.6□□□□□ -0.23
SQSTM1-205ENST00000464493 SPIN4Q56A73 249 aa13.6□□□□□ -0.23
SQSTM1-205ENST00000464493 SPDYAQ5MJ70 313 aa13.6□□□□□ -0.23
SQSTM1-205ENST00000464493 KANK2Q63ZY3 851 aa13.6□□□□□ -0.23
SQSTM1-205ENST00000464493 PLAG1Q6DJT9 500 aa13.6□□□□□ -0.23
SQSTM1-205ENST00000464493 ASB18Q6ZVZ8 466 aa13.6□□□□□ -0.23
SQSTM1-205ENST00000464493 AMER2Q8N7J2 671 aa13.6□□□□□ -0.23
SQSTM1-205ENST00000464493 C7orf57Q8NEG2 295 aa13.6□□□□□ -0.23
SQSTM1-205ENST00000464493 APIPQ96GX9 242 aa13.6□□□□□ -0.23
SQSTM1-205ENST00000464493 SMAD5Q99717 465 aaKnown RBP13.6□□□□□ -0.23
SQSTM1-205ENST00000464493 ALOXE3Q9BYJ1 711 aa13.6□□□□□ -0.23
SQSTM1-205ENST00000464493 ZNF552Q9H707 407 aaPredicted RBP13.6□□□□□ -0.23
SQSTM1-205ENST00000464493 WDR41Q9HAD4 459 aa13.6□□□□□ -0.23
SQSTM1-205ENST00000464493 PNO1Q9NRX1 252 aaKnown RBP13.6□□□□□ -0.23
SQSTM1-205ENST00000464493 NKIRAS1Q9NYS0 192 aa13.6□□□□□ -0.23
SQSTM1-205ENST00000464493 ZNF451Q9Y4E5 1061 aa13.6□□□□□ -0.23
SQSTM1-205ENST00000464493 PCDHGB7Q9Y5F8 929 aa13.6□□□□□ -0.23
SQSTM1-205ENST00000464493 TNRC6AQ8NDV7 1962 aaKnown RBP13.6□□□□□ -0.23
SQSTM1-205ENST00000464493 A8MUA0 341 aa13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 TMEM114B3SHH9 223 aa13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 SLC28A1O00337 649 aa13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 GUCY1B2O75343 617 aa13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 PRKRAO75569 313 aaKnown RBP13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 PDGFAP04085 211 aa13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 ALPPP05187 535 aa13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 CELA2AP08217 269 aa13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 NR2F6P10588 404 aa13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 NR1D1P20393 614 aa13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 GRK2P25098 689 aa13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 WDR4P57081 412 aaKnown RBP13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 ACSM2AQ08AH3 577 aa13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 BIKQ13323 160 aa13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 SERTAD2Q14140 314 aa13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 SH2D4BQ5SQS7 431 aa13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 VWA5B1Q5TIE3 1220 aa13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 AGAP7PQ5VUJ5 663 aa13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 ACSM2BQ68CK6 577 aa13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 JMJD6Q6NYC1 403 aaPredicted RBP13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 ATG14Q6ZNE5 492 aa13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 RNF165Q6ZSG1 346 aa13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 OR4N5Q8IXE1 308 aa13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 GOLGA6L1Q8N7Z2 621 aa13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 M1APQ8TC57 530 aa13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 MGARPQ8TDB4 240 aa13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 ANKRD9Q96BM1 317 aaPredicted RBP13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 ATP6V1G3Q96LB4 118 aa13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 AGAP4Q96P64 663 aa13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 SH3GL2Q99962 352 aa13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 C5AR2Q9P296 337 aa13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 VTI1BQ9UEU0 232 aa13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 ZDHHC2Q9UIJ5 367 aa13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 MCM8Q9UJA3 840 aa13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 DNAJC15Q9Y5T4 150 aa13.59□□□□□ -0.23
SQSTM1-205ENST00000464493 MYOCOSA0A1B0GUC4 107 aa13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 SAGE2PA6NJ88 616 aa13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 GLOD5A6NK44 160 aa13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 WASHC1A8K0Z3 465 aa13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 TMEM233B4DJY2 109 aa13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 RGS14O43566 566 aa13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 ITM2AO43736 263 aa13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 PCDH7O60245 1069 aa13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 FGF17O60258 216 aa13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 MYO1DO94832 1006 aa13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 HSPA4LO95757 839 aa13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 AIFM1O95831 613 aa13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 PRB1P04280 392 aa13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 IFNA16P05015 189 aa13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 ITGAMP11215 1152 aa13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 BGNP21810 368 aa13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 PPP2R1BP30154 601 aa13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 SLC26A5P58743 744 aa13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 ABCE1P61221 599 aaKnown RBP13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 TRA2BP62995 288 aaKnown RBP13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 RAE1P78406 368 aaKnown RBP13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 ID2Q02363 134 aa13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 FOLH1Q04609 750 aa13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 NFATC3Q12968 1075 aa13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 UGT3A2Q3SY77 523 aa13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 NDUFAF5Q5TEU4 345 aa13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 CES4AQ5XG92 561 aa13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 AGR3Q8TD06 166 aa13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 BRIX1Q8TDN6 353 aaKnown RBP13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 TWIST2Q8WVJ9 160 aa13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 PSMF1Q92530 271 aa13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 UCN3Q969E3 161 aa13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 TM4SF18Q96CE8 201 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms