RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 KHKP50053 298 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 SMSP52788 366 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 SNRPD2P62316 118 aaKnown RBP8.7□□□□□ -1.02
HPS4-208ENST00000464362 NKX3-2P78367 333 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 HOXC5Q00444 222 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 GRIN2CQ14957 1233 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 LIPJQ5W064 366 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 ZNF613Q6PF04 617 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 C17orf99Q6UX52 265 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 LINGO2Q7L985 606 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 TRPV1Q8NER1 839 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 TBC1D15Q8TC07 691 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 NEIL2Q969S2 332 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 TMEM80Q96HE8 168 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 TMEM19Q96HH6 336 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 ZNF514Q96K75 400 aaPredicted RBP8.7□□□□□ -1.02
HPS4-208ENST00000464362 IRAK3Q9Y616 596 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 GMEB1Q9Y692 573 aa8.7□□□□□ -1.02
HPS4-208ENST00000464362 COL5A3P25940 1745 aaPredicted RBP8.7□□□□□ -1.02
HPS4-208ENST00000464362 ZNF30P17039 623 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 HRH2P25021 359 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 STAT5AP42229 794 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 PPP5CP53041 499 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 PNLIPRP1P54315 467 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 CAMK1Q14012 370 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 TBC1D25Q3MII6 688 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 SPATS1Q496A3 300 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 UBE2UQ5VVX9 321 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 GTF2IRD2BQ6EKJ0 949 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 PLEKHG7Q6ZR37 379 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 CEP68Q76N32 757 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 GTF2IRD2Q86UP8 949 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 SLAIN1Q8ND83 568 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 PIP5K1AQ99755 562 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 TMEM121BQ9BXQ6 578 aaPredicted RBP8.69□□□□□ -1.02
HPS4-208ENST00000464362 IRF2BPLQ9H1B7 796 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 STOX2Q9P2F5 926 aaPredicted RBP8.69□□□□□ -1.02
HPS4-208ENST00000464362 NFKBIL1Q9UBC1 381 aaPredicted RBP8.69□□□□□ -1.02
HPS4-208ENST00000464362 MKLN1Q9UL63 735 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 ZFR2Q9UPR6 939 aaKnown RBP8.69□□□□□ -1.02
HPS4-208ENST00000464362 MCM3APO60318 1980 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 DRGXA6NNA5 263 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 A8MUA0 341 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 FAM227AF5H4B4 570 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 OR7A17O14581 309 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 MAP4K2Q12851 820 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 RGNQ15493 299 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 PRPF38BQ5VTL8 546 aaKnown RBP8.69□□□□□ -1.02
HPS4-208ENST00000464362 WDR53Q7Z5U6 358 aaPredicted RBP8.69□□□□□ -1.02
HPS4-208ENST00000464362 TAF8Q7Z7C8 310 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 ZNF548Q8NEK5 533 aaPredicted RBP8.69□□□□□ -1.02
HPS4-208ENST00000464362 ISL2Q96A47 359 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 SECISBP2Q96T21 854 aaKnown RBP8.69□□□□□ -1.02
HPS4-208ENST00000464362 ZIC5Q96T25 663 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 MCHR1Q99705 422 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 RACGAP1Q9H0H5 632 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 TAS2R7Q9NYW3 318 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 EIF3KQ9UBQ5 218 aaKnown RBP8.69□□□□□ -1.02
HPS4-208ENST00000464362 CD8B2A6NJW9 211 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 GABRR3A8MPY1 467 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 FXYD1O00168 92 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 PRMT3O60678 531 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 CDC123O75794 336 aaPredicted RBP8.69□□□□□ -1.02
HPS4-208ENST00000464362 APODP05090 189 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 RETP07949 1114 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 CD8BP10966 210 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 CD97P48960 835 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 PSMD4P55036 377 aaKnown RBP8.69□□□□□ -1.02
HPS4-208ENST00000464362 MAD2L1BPQ15013 274 aaPredicted RBP8.69□□□□□ -1.02
HPS4-208ENST00000464362 ZNF791Q3KP31 576 aaPredicted RBP8.69□□□□□ -1.02
HPS4-208ENST00000464362 SPATC1Q76KD6 591 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 OR8K5Q8NH50 307 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 TNFAIP8L1Q8WVP5 186 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 HERVK_113Q902F9 699 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 FRMD6Q96NE9 622 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 MND1Q9BWT6 205 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 SLC12A9Q9BXP2 914 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 GSDMCQ9BYG8 508 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 SPHK2Q9NRA0 654 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 HEBP1Q9NRV9 189 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 ENPP5Q9UJA9 477 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 POU2F3Q9UKI9 436 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 WDR45Q9Y484 360 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 PCDHGA3Q9Y5H0 932 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 MAST2Q6P0Q8 1798 aa8.69□□□□□ -1.02
HPS4-208ENST00000464362 NOTOA8MTQ0 251 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 SCAMP2O15127 329 aaKnown RBP8.68□□□□□ -1.02
HPS4-208ENST00000464362 MID1O15344 667 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 SLC25A12O75746 678 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 CSN2P05814 226 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 MNDAP41218 407 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 GPR4P46093 362 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 TOMM20Q15388 145 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 SOWAHCQ53LP3 525 aaPredicted RBP8.68□□□□□ -1.02
HPS4-208ENST00000464362 TOR1AIP1Q5JTV8 583 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 DESI1Q6ICB0 168 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 BORAQ6PGQ7 559 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 SBSNQ6UWP8 590 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 HSD11B1LQ7Z5J1 315 aa8.68□□□□□ -1.02
HPS4-208ENST00000464362 B3GNT8Q7Z7M8 397 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms