RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 HSPA7P48741 367 aa20.91■□□□□ 0.94
USP4-208ENST00000464168 DNASE1L1P49184 302 aa20.91■□□□□ 0.94
USP4-208ENST00000464168 ID2Q02363 134 aa20.91■□□□□ 0.94
USP4-208ENST00000464168 TGM3Q08188 693 aa20.91■□□□□ 0.94
USP4-208ENST00000464168 PDIA2Q13087 525 aaKnown RBP20.91■□□□□ 0.94
USP4-208ENST00000464168 SERTAD2Q14140 314 aa20.91■□□□□ 0.94
USP4-208ENST00000464168 ZNF793Q6ZN11 406 aa20.91■□□□□ 0.94
USP4-208ENST00000464168 GPSM1Q86YR5 675 aa20.91■□□□□ 0.94
USP4-208ENST00000464168 TCAIMQ8N3R3 496 aa20.91■□□□□ 0.94
USP4-208ENST00000464168 OR5L2Q8NGL0 311 aa20.91■□□□□ 0.94
USP4-208ENST00000464168 ZNF721Q8TF20 911 aa20.91■□□□□ 0.94
USP4-208ENST00000464168 ANKRD9Q96BM1 317 aaPredicted RBP20.91■□□□□ 0.94
USP4-208ENST00000464168 KCNC2Q96PR1 638 aa20.91■□□□□ 0.94
USP4-208ENST00000464168 MAPKAP1Q9BPZ7 522 aa20.91■□□□□ 0.94
USP4-208ENST00000464168 CNOT10Q9H9A5 744 aaKnown RBP20.91■□□□□ 0.94
USP4-208ENST00000464168 SACM1LQ9NTJ5 587 aa20.91■□□□□ 0.94
USP4-208ENST00000464168 TUBA8Q9NY65 449 aaPredicted RBP20.91■□□□□ 0.94
USP4-208ENST00000464168 WWOXQ9NZC7 414 aa20.91■□□□□ 0.94
USP4-208ENST00000464168 Q9UFV3 132 aa20.91■□□□□ 0.94
USP4-208ENST00000464168 ACAD8Q9UKU7 415 aa20.91■□□□□ 0.94
USP4-208ENST00000464168 ABCA4P78363 2273 aa20.9■□□□□ 0.94
USP4-208ENST00000464168 STK16O75716 305 aa20.9■□□□□ 0.94
USP4-208ENST00000464168 PIAS1O75925 651 aa20.9■□□□□ 0.94
USP4-208ENST00000464168 P04436 131 aa20.9■□□□□ 0.94
USP4-208ENST00000464168 ATP5A1P25705 553 aaKnown RBP20.9■□□□□ 0.94
USP4-208ENST00000464168 ADH7P40394 386 aa20.9■□□□□ 0.94
USP4-208ENST00000464168 DR1Q01658 176 aa20.9■□□□□ 0.94
USP4-208ENST00000464168 POU4F1Q01851 419 aa20.9■□□□□ 0.94
USP4-208ENST00000464168 SLC10A1Q14973 349 aa20.9■□□□□ 0.94
USP4-208ENST00000464168 MPEG1Q2M385 716 aa20.9■□□□□ 0.94
USP4-208ENST00000464168 KRTAP21-3Q3LHN1 58 aa20.9■□□□□ 0.94
USP4-208ENST00000464168 PIGGQ5H8A4 983 aa20.9■□□□□ 0.94
USP4-208ENST00000464168 CDKL4Q5MAI5 379 aa20.9■□□□□ 0.94
USP4-208ENST00000464168 SULT1C3Q6IMI6 304 aa20.9■□□□□ 0.94
USP4-208ENST00000464168 KLHL7Q8IXQ5 586 aa20.9■□□□□ 0.94
USP4-208ENST00000464168 ACOT4Q8N9L9 421 aa20.9■□□□□ 0.94
USP4-208ENST00000464168 SNX31Q8N9S9 440 aa20.9■□□□□ 0.94
USP4-208ENST00000464168 EFCAB11Q9BUY7 163 aa20.9■□□□□ 0.94
USP4-208ENST00000464168 CNPPD1Q9BV87 410 aa20.9■□□□□ 0.94
USP4-208ENST00000464168 CAB39LQ9H9S4 337 aa20.9■□□□□ 0.94
USP4-208ENST00000464168 SMYD2Q9NRG4 433 aa20.9■□□□□ 0.94
USP4-208ENST00000464168 IGSF5Q9NSI5 407 aa20.9■□□□□ 0.94
USP4-208ENST00000464168 MTO1Q9Y2Z2 717 aaKnown RBP20.9■□□□□ 0.94
USP4-208ENST00000464168 L3MBTL1Q9Y468 752 aa20.9■□□□□ 0.94
USP4-208ENST00000464168 ATG4BQ9Y4P1 393 aa20.9■□□□□ 0.94
USP4-208ENST00000464168 EML6Q6ZMW3 1958 aa20.9■□□□□ 0.94
USP4-208ENST00000464168 E7ESA3 106 aa20.89■□□□□ 0.93
USP4-208ENST00000464168 SEC31AO94979 1220 aaKnown RBP20.89■□□□□ 0.93
USP4-208ENST00000464168 ZWINTO95229 277 aa20.89■□□□□ 0.93
USP4-208ENST00000464168 CCDC166P0CW27 439 aa20.89■□□□□ 0.93
USP4-208ENST00000464168 EPORP19235 508 aa20.89■□□□□ 0.93
USP4-208ENST00000464168 MAN2A2P49641 1150 aa20.89■□□□□ 0.93
USP4-208ENST00000464168 IST1P53990 364 aa20.89■□□□□ 0.93
USP4-208ENST00000464168 SLC12A2P55011 1212 aa20.89■□□□□ 0.93
USP4-208ENST00000464168 OR4D1Q15615 310 aa20.89■□□□□ 0.93
USP4-208ENST00000464168 PDK4Q16654 411 aa20.89■□□□□ 0.93
USP4-208ENST00000464168 TBCDQ9BTW9 1192 aa20.89■□□□□ 0.93
USP4-208ENST00000464168 ROGDIQ9GZN7 287 aa20.89■□□□□ 0.93
USP4-208ENST00000464168 SH2D2AQ9NP31 389 aa20.89■□□□□ 0.93
USP4-208ENST00000464168 NSMCE4AQ9NXX6 385 aa20.89■□□□□ 0.93
USP4-208ENST00000464168 PTBP2Q9UKA9 531 aaKnown RBP20.89■□□□□ 0.93
USP4-208ENST00000464168 ZNF469Q96JG9 3925 aaPredicted RBP20.89■□□□□ 0.93
USP4-208ENST00000464168 RTCAO00442 366 aaKnown RBP20.88■□□□□ 0.93
USP4-208ENST00000464168 WDR1O75083 606 aa20.88■□□□□ 0.93
USP4-208ENST00000464168 PIGAP37287 484 aa20.88■□□□□ 0.93
USP4-208ENST00000464168 ASPHQ12797 758 aa20.88■□□□□ 0.93
USP4-208ENST00000464168 LAPTM5Q13571 262 aa20.88■□□□□ 0.93
USP4-208ENST00000464168 ZNF791Q3KP31 576 aaPredicted RBP20.88■□□□□ 0.93
USP4-208ENST00000464168 ADGRD1Q6QNK2 874 aa20.88■□□□□ 0.93
USP4-208ENST00000464168 SRFBP1Q8NEF9 429 aaKnown RBP20.88■□□□□ 0.93
USP4-208ENST00000464168 MYRIPQ8NFW9 859 aa20.88■□□□□ 0.93
USP4-208ENST00000464168 ZNF473Q8WTR7 871 aaKnown RBP20.88■□□□□ 0.93
USP4-208ENST00000464168 SARAFQ96BY9 339 aa20.88■□□□□ 0.93
USP4-208ENST00000464168 SENP5Q96HI0 755 aaPredicted RBP20.88■□□□□ 0.93
USP4-208ENST00000464168 RUNDC3BQ96NL0 473 aa20.88■□□□□ 0.93
USP4-208ENST00000464168 MS4A8Q9BY19 250 aa20.88■□□□□ 0.93
USP4-208ENST00000464168 LDAHQ9H6V9 325 aa20.88■□□□□ 0.93
USP4-208ENST00000464168 COPS7AQ9UBW8 275 aa20.88■□□□□ 0.93
USP4-208ENST00000464168 HRNRQ86YZ3 2850 aaPredicted RBP20.87■□□□□ 0.93
USP4-208ENST00000464168 PHGDHO43175 533 aaKnown RBP20.87■□□□□ 0.93
USP4-208ENST00000464168 HCN1O60741 890 aa20.87■□□□□ 0.93
USP4-208ENST00000464168 DIAPH2O60879 1101 aa20.87■□□□□ 0.93
USP4-208ENST00000464168 CD1DP15813 335 aa20.87■□□□□ 0.93
USP4-208ENST00000464168 TCP1P17987 556 aaKnown RBP20.87■□□□□ 0.93
USP4-208ENST00000464168 ENDOUP21128 410 aaKnown RBP20.87■□□□□ 0.93
USP4-208ENST00000464168 HIST1H1TP22492 207 aaPredicted RBP20.87■□□□□ 0.93
USP4-208ENST00000464168 CASP2P42575 452 aa20.87■□□□□ 0.93
USP4-208ENST00000464168 MSH2P43246 934 aa20.87■□□□□ 0.93
USP4-208ENST00000464168 IGLV3-21P80748 117 aaPredicted RBP20.87■□□□□ 0.93
USP4-208ENST00000464168 IRF8Q02556 426 aa20.87■□□□□ 0.93
USP4-208ENST00000464168 CHIT1Q13231 466 aa20.87■□□□□ 0.93
USP4-208ENST00000464168 TBCCQ15814 346 aa20.87■□□□□ 0.93
USP4-208ENST00000464168 HIST2H2ACQ16777 129 aaPredicted RBP20.87■□□□□ 0.93
USP4-208ENST00000464168 SLC25A35Q3KQZ1 300 aa20.87■□□□□ 0.93
USP4-208ENST00000464168 PAGE2BQ5JRK9 111 aa20.87■□□□□ 0.93
USP4-208ENST00000464168 C1orf185Q5T7R7 199 aa20.87■□□□□ 0.93
USP4-208ENST00000464168 WLSQ5T9L3 541 aa20.87■□□□□ 0.93
USP4-208ENST00000464168 HIST2H2AA3Q6FI13 130 aa20.87■□□□□ 0.93
USP4-208ENST00000464168 OR4N5Q8IXE1 308 aa20.87■□□□□ 0.93
USP4-208ENST00000464168 TMUB1Q9BVT8 246 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms