RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 TAS2R50P59544 299 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 PMP22Q01453 160 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 CLCQ05315 142 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 STX4Q12846 297 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 RCN2Q14257 317 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 ELAVL1Q15717 326 aaKnown RBP12.09□□□□□ -0.47
XRN1-203ENST00000463916 LCA5Q86VQ0 697 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 ARMC10Q8N2F6 343 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 OR2W6PQ8NHA6 318 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 UTP23Q9BRU9 249 aaKnown RBP12.09□□□□□ -0.47
XRN1-203ENST00000463916 C12orf65Q9H3J6 166 aaKnown RBP12.09□□□□□ -0.47
XRN1-203ENST00000463916 RPF2Q9H7B2 306 aaKnown RBP12.09□□□□□ -0.47
XRN1-203ENST00000463916 LIN28AQ9H9Z2 209 aaKnown RBP12.09□□□□□ -0.47
XRN1-203ENST00000463916 ADAP2Q9NPF8 381 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 KLHL1Q9NR64 748 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 POLEQ07864 2286 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 A0A1W2PR48 441 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 ANKUB1A6NFN9 424 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 GLOD5A6NK44 160 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 SUPT7LO94864 414 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 OR4F21O95013 312 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 OTCP00480 354 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 OR1C1Q15619 314 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 GGTA1PQ4G0N0 100 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 ZNF766Q5HY98 468 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 TCHHL1Q5QJ38 904 aaPredicted RBP12.09□□□□□ -0.47
XRN1-203ENST00000463916 TTC19Q6DKK2 380 aaPredicted RBP12.09□□□□□ -0.47
XRN1-203ENST00000463916 FAM180AQ6UWF9 173 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 DGAT2L6Q6ZPD8 337 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 TDRPQ86YL5 185 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 LGI4Q8N135 537 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.09□□□□□ -0.47
XRN1-203ENST00000463916 HBEGFQ99075 208 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 SLX1AQ9BQ83 275 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 CENPKQ9BS16 269 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 MRPL1Q9BYD6 325 aaKnown RBP12.09□□□□□ -0.47
XRN1-203ENST00000463916 DEFB126Q9BYW3 111 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.09□□□□□ -0.47
XRN1-203ENST00000463916 PPT2Q9UMR5 302 aa12.09□□□□□ -0.47
XRN1-203ENST00000463916 V9GYY5 206 aaPredicted RBP12.09□□□□□ -0.47
XRN1-203ENST00000463916 G3V2L1 256 aa12.08□□□□□ -0.48
XRN1-203ENST00000463916 DDAH2O95865 285 aa12.08□□□□□ -0.48
XRN1-203ENST00000463916 PDYNP01213 254 aa12.08□□□□□ -0.48
XRN1-203ENST00000463916 GSTA1P08263 222 aa12.08□□□□□ -0.48
XRN1-203ENST00000463916 FAM58BPP0C7Q3 252 aa12.08□□□□□ -0.48
XRN1-203ENST00000463916 TAC1P20366 129 aa12.08□□□□□ -0.48
XRN1-203ENST00000463916 IMPDH1P20839 514 aa12.08□□□□□ -0.48
XRN1-203ENST00000463916 ATP5F1P24539 256 aaPredicted RBP12.08□□□□□ -0.48
XRN1-203ENST00000463916 CLCN2P51788 898 aa12.08□□□□□ -0.48
XRN1-203ENST00000463916 ARFIP1P53367 373 aa12.08□□□□□ -0.48
XRN1-203ENST00000463916 PRKAA2P54646 552 aa12.08□□□□□ -0.48
XRN1-203ENST00000463916 PHEXP78562 749 aa12.08□□□□□ -0.48
XRN1-203ENST00000463916 TNFRSF17Q02223 184 aa12.08□□□□□ -0.48
XRN1-203ENST00000463916 OC90Q02509 493 aaPredicted RBP12.08□□□□□ -0.48
XRN1-203ENST00000463916 PPWD1Q96BP3 646 aaKnown RBP12.08□□□□□ -0.48
XRN1-203ENST00000463916 VMP1Q96GC9 406 aa12.08□□□□□ -0.48
XRN1-203ENST00000463916 OLAHQ9NV23 265 aa12.08□□□□□ -0.48
XRN1-203ENST00000463916 LRFN1Q9P244 771 aa12.08□□□□□ -0.48
XRN1-203ENST00000463916 DCDC2Q9UHG0 476 aa12.08□□□□□ -0.48
XRN1-203ENST00000463916 CLCA3PQ9Y6N3 262 aa12.08□□□□□ -0.48
XRN1-203ENST00000463916 SPACA6W5XKT8 324 aa12.08□□□□□ -0.48
XRN1-203ENST00000463916 ARHGAP10A1A4S6 786 aa12.07□□□□□ -0.48
XRN1-203ENST00000463916 C17orf105B2RV13 164 aa12.07□□□□□ -0.48
XRN1-203ENST00000463916 HRKO00198 91 aa12.07□□□□□ -0.48
XRN1-203ENST00000463916 MST1P26927 711 aa12.07□□□□□ -0.48
XRN1-203ENST00000463916 TDGF1P3P51864 188 aa12.07□□□□□ -0.48
XRN1-203ENST00000463916 IGLV3-21P80748 117 aaPredicted RBP12.07□□□□□ -0.48
XRN1-203ENST00000463916 FOLH1Q04609 750 aa12.07□□□□□ -0.48
XRN1-203ENST00000463916 IFT88Q13099 833 aa12.07□□□□□ -0.48
XRN1-203ENST00000463916 FHL5Q5TD97 284 aa12.07□□□□□ -0.48
XRN1-203ENST00000463916 TMEM132CQ8N3T6 1108 aa12.07□□□□□ -0.48
XRN1-203ENST00000463916 BCORP1Q8N888 145 aa12.07□□□□□ -0.48
XRN1-203ENST00000463916 CDYL2Q8N8U2 506 aa12.07□□□□□ -0.48
XRN1-203ENST00000463916 ST6GALNAC3Q8NDV1 305 aa12.07□□□□□ -0.48
XRN1-203ENST00000463916 SUN3Q8TAQ9 357 aa12.07□□□□□ -0.48
XRN1-203ENST00000463916 DOK4Q8TEW6 326 aa12.07□□□□□ -0.48
XRN1-203ENST00000463916 SERPINI1Q99574 410 aa12.07□□□□□ -0.48
XRN1-203ENST00000463916 OR8D2Q9GZM6 311 aa12.07□□□□□ -0.48
XRN1-203ENST00000463916 ELOVL6Q9H5J4 265 aa12.07□□□□□ -0.48
XRN1-203ENST00000463916 TEX10Q9NXF1 929 aaPredicted RBP12.07□□□□□ -0.48
XRN1-203ENST00000463916 MS4A12Q9NXJ0 267 aa12.07□□□□□ -0.48
XRN1-203ENST00000463916 ABI3Q9P2A4 366 aa12.07□□□□□ -0.48
XRN1-203ENST00000463916 PHF11Q9UIL8 331 aa12.07□□□□□ -0.48
XRN1-203ENST00000463916 SPTAN1Q13813 2472 aaKnown RBP12.07□□□□□ -0.48
XRN1-203ENST00000463916 NBPF19A0A087WUL8 3843 aa12.07□□□□□ -0.48
XRN1-203ENST00000463916 A0A1W2PS29 197 aa12.07□□□□□ -0.48
XRN1-203ENST00000463916 PGRMC2O15173 223 aa12.07□□□□□ -0.48
XRN1-203ENST00000463916 SEMA3DO95025 777 aa12.07□□□□□ -0.48
XRN1-203ENST00000463916 RASAL1O95294 804 aa12.07□□□□□ -0.48
XRN1-203ENST00000463916 KLK1P06870 262 aa12.07□□□□□ -0.48
XRN1-203ENST00000463916 KRT15P19012 456 aa12.07□□□□□ -0.48
XRN1-203ENST00000463916 SERTAD2Q14140 314 aa12.07□□□□□ -0.48
XRN1-203ENST00000463916 CYP20A1Q6UW02 462 aa12.07□□□□□ -0.48
XRN1-203ENST00000463916 TANKQ92844 425 aa12.07□□□□□ -0.48
XRN1-203ENST00000463916 DAZLQ92904 295 aaKnown RBP12.07□□□□□ -0.48
XRN1-203ENST00000463916 L3HYPDHQ96EM0 354 aa12.07□□□□□ -0.48
XRN1-203ENST00000463916 SCMH1Q96GD3 660 aa12.07□□□□□ -0.48
XRN1-203ENST00000463916 ZGRF1Q86YA3 2104 aa12.07□□□□□ -0.48
XRN1-203ENST00000463916 BLACEA4D250 179 aa12.06□□□□□ -0.48
XRN1-203ENST00000463916 UBFD1O14562 309 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms