RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 LANCL3Q6ZV70 420 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 CLNKQ7Z7G1 428 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 WDR75Q8IWA0 830 aaKnown RBP11.08□□□□□ -0.64
CPNE1-221ENST00000462352 SNRNP27Q8WVK2 155 aaKnown RBP11.08□□□□□ -0.64
CPNE1-221ENST00000462352 THAP4Q8WY91 577 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 UCN3Q969E3 161 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 C8orf44Q96CB5 159 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 CRELD1Q96HD1 420 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 FCRL1Q96LA6 429 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 IP6K3Q96PC2 410 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 RPF2Q9H7B2 306 aaKnown RBP11.08□□□□□ -0.64
CPNE1-221ENST00000462352 WDR41Q9HAD4 459 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 MEAF6Q9HAF1 191 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 NECTIN3Q9NQS3 549 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 P4HTMQ9NXG6 502 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 VTI1BQ9UEU0 232 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 POLHQ9Y253 713 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 DLGAP4Q9Y2H0 992 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 TMED5Q9Y3A6 229 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 CLDN16Q9Y5I7 305 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 ZZEF1O43149 2961 aa11.08□□□□□ -0.64
CPNE1-221ENST00000462352 EPG5Q9HCE0 2579 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 PCSK5Q92824 1860 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 LOC102723996A0A087X1L8 192 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 TCRBV16S1A1N1A0A5B0 115 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 C1orf226A1L170 272 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 GLOD5A6NK44 160 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 TRPC5OSA6NMA1 111 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 WASHC1A8K0Z3 465 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 TCP11X1B4DZS4 312 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 TGFBR3LH3BV60 316 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 SDHDO14521 159 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 PGRMC2O15173 223 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 FGF17O60258 216 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 LDB3O75112 727 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 IL3P08700 152 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 PRR35P0CG20 571 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 ACPPP15309 386 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 TACR1P25103 407 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 MDH1P40925 334 aaKnown RBP11.07□□□□□ -0.64
CPNE1-221ENST00000462352 GSTM5P46439 218 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 TAS2R50P59544 299 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 EEF1A2Q05639 463 aaKnown RBP11.07□□□□□ -0.64
CPNE1-221ENST00000462352 DEFB109BQ30KR1 87 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 VWA5B1Q5TIE3 1220 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 OR52E8Q6IFG1 317 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 C19orf48Q6RUI8 117 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 RIPOR1Q6ZS17 1223 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 MAVSQ7Z434 540 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 ANKRD37Q7Z713 158 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 MMP21Q8N119 569 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 FNDC5Q8NAU1 212 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 OR11G2Q8NGC1 345 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 CDC26Q8NHZ8 85 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.07□□□□□ -0.64
CPNE1-221ENST00000462352 C16orf78Q8WTQ4 265 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 TANKQ92844 425 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 FAIM2Q9BWQ8 316 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 PRORYQ9H606 182 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 AKTIPQ9H8T0 292 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 C19orf25Q9UFG5 118 aaPredicted RBP11.07□□□□□ -0.64
CPNE1-221ENST00000462352 MAN2B2Q9Y2E5 1009 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 PCDHA9Q9Y5H5 950 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 USH1CQ9Y6N9 552 aa11.07□□□□□ -0.64
CPNE1-221ENST00000462352 SCN2AQ99250 2005 aa11.06□□□□□ -0.64
CPNE1-221ENST00000462352 DSPP15924 2871 aaKnown RBP11.06□□□□□ -0.64
CPNE1-221ENST00000462352 IGHV1-45A0A0A0MS14 117 aa11.06□□□□□ -0.64
CPNE1-221ENST00000462352 IGHV3-20A0A0C4DH32 117 aa11.06□□□□□ -0.64
CPNE1-221ENST00000462352 A0A1W2PQ72 361 aa11.06□□□□□ -0.64
CPNE1-221ENST00000462352 ARGFXA6NJG6 315 aa11.06□□□□□ -0.64
CPNE1-221ENST00000462352 PEX12O00623 359 aa11.06□□□□□ -0.64
CPNE1-221ENST00000462352 ZNF195O14628 629 aa11.06□□□□□ -0.64
CPNE1-221ENST00000462352 EDF1O60869 148 aaKnown RBP11.06□□□□□ -0.64
CPNE1-221ENST00000462352 VPS4BO75351 444 aa11.06□□□□□ -0.64
CPNE1-221ENST00000462352 COX6A1P12074 109 aa11.06□□□□□ -0.64
CPNE1-221ENST00000462352 BCKDHAP12694 445 aa11.06□□□□□ -0.64
CPNE1-221ENST00000462352 SDC1P18827 310 aa11.06□□□□□ -0.64
CPNE1-221ENST00000462352 MAPK1P28482 360 aa11.06□□□□□ -0.64
CPNE1-221ENST00000462352 EPHA3P29320 983 aa11.06□□□□□ -0.64
CPNE1-221ENST00000462352 IGLV3-21P80748 117 aaPredicted RBP11.06□□□□□ -0.64
CPNE1-221ENST00000462352 ID2Q02363 134 aa11.06□□□□□ -0.64
CPNE1-221ENST00000462352 FOLH1Q04609 750 aa11.06□□□□□ -0.64
CPNE1-221ENST00000462352 STX4Q12846 297 aa11.06□□□□□ -0.64
CPNE1-221ENST00000462352 HEPACAMQ14CZ8 416 aa11.06□□□□□ -0.64
CPNE1-221ENST00000462352 PCOLCEQ15113 449 aa11.06□□□□□ -0.64
CPNE1-221ENST00000462352 SMU1Q2TAY7 513 aa11.06□□□□□ -0.64
CPNE1-221ENST00000462352 COL28A1Q2UY09 1125 aa11.06□□□□□ -0.64
CPNE1-221ENST00000462352 SLC9B1Q4ZJI4 515 aa11.06□□□□□ -0.64
CPNE1-221ENST00000462352 SFT2D3Q587I9 215 aa11.06□□□□□ -0.64
CPNE1-221ENST00000462352 SLC48A1Q6P1K1 146 aa11.06□□□□□ -0.64
CPNE1-221ENST00000462352 LARP4Q71RC2 724 aaKnown RBP eCLIP11.06□□□□□ -0.648e-24■□□□□ 9.5
CPNE1-221ENST00000462352 CPEB2Q7Z5Q1 589 aaKnown RBP11.06□□□□□ -0.64
CPNE1-221ENST00000462352 OR4N5Q8IXE1 308 aa11.06□□□□□ -0.64
CPNE1-221ENST00000462352 TMEM132CQ8N3T6 1108 aa11.06□□□□□ -0.64
CPNE1-221ENST00000462352 DNAJB14Q8TBM8 379 aa11.06□□□□□ -0.64
CPNE1-221ENST00000462352 ANKRD9Q96BM1 317 aaPredicted RBP11.06□□□□□ -0.64
CPNE1-221ENST00000462352 VPS50Q96JG6 964 aa11.06□□□□□ -0.64
CPNE1-221ENST00000462352 EGLN2Q96KS0 407 aa11.06□□□□□ -0.64
CPNE1-221ENST00000462352 CATSPER2Q96P56 530 aa11.06□□□□□ -0.64
CPNE1-221ENST00000462352 C1orf50Q9BV19 199 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms