RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 PDZD3Q86UT5 571 aa17.27■□□□□ 0.35
HPS3-202ENST00000460120 OR6Q1Q8NGQ2 317 aa17.27■□□□□ 0.35
HPS3-202ENST00000460120 MYDGFQ969H8 173 aa17.27■□□□□ 0.35
HPS3-202ENST00000460120 PPP1R16AQ96I34 528 aa17.27■□□□□ 0.35
HPS3-202ENST00000460120 BTBD2Q9BX70 525 aa17.27■□□□□ 0.35
HPS3-202ENST00000460120 SLIRPQ9GZT3 109 aaKnown RBP17.27■□□□□ 0.35
HPS3-202ENST00000460120 MBNL1Q9NR56 388 aaKnown RBP17.27■□□□□ 0.35
HPS3-202ENST00000460120 IMP3Q9NV31 184 aaKnown RBP17.27■□□□□ 0.35
HPS3-202ENST00000460120 TRPC4Q9UBN4 977 aa17.27■□□□□ 0.35
HPS3-202ENST00000460120 NINQ8N4C6 2090 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 FFAR1O14842 300 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 PDPK1O15530 556 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 TMPRSS11DO60235 418 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 B4GALT2O60909 372 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 CDK1P06493 297 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 HOXB3P14651 431 aaPredicted RBP17.26■□□□□ 0.35
HPS3-202ENST00000460120 ITGA2P17301 1181 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 PCDH1Q08174 1060 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 LRRK1Q38SD2 2015 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 PTCHD4Q6ZW05 846 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 DSG4Q86SJ6 1040 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 FAM129CQ86XR2 697 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 DCUN1D3Q8IWE4 304 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 MFSD4AQ8N468 514 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 FBXO15Q8NCQ5 510 aaPredicted RBP17.26■□□□□ 0.35
HPS3-202ENST00000460120 Q96MT0 163 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 OR5M11Q96RB7 305 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 C17orf62Q9BQA9 187 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 TMEM38AQ9H6F2 299 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 KCNK6Q9Y257 313 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 WDR37Q9Y2I8 494 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 PLEKHM1Q9Y4G2 1056 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 LINC01553A4QN01 128 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 KRBA1A5PL33 1030 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 H3BN98 237 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 DNTTP04053 509 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 ADORA3P0DMS8 318 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 UQCRC2P22695 453 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 PIK3CBP42338 1070 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 RBBP4Q09028 425 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 E2F2Q14209 437 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 ARMCX4Q5H9R4 360 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 REEP3Q6NUK4 255 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 TM4SF18Q96CE8 201 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 FERD3LQ96RJ6 166 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 DPEP2Q9H4A9 486 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 KCNK12Q9HB15 430 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 KLHL20Q9Y2M5 609 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 HCN4Q9Y3Q4 1203 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 ENPP4Q9Y6X5 453 aa17.26■□□□□ 0.35
HPS3-202ENST00000460120 HOXC11O43248 304 aaPredicted RBP17.25■□□□□ 0.35
HPS3-202ENST00000460120 LCMT2O60294 686 aaKnown RBP17.25■□□□□ 0.35
HPS3-202ENST00000460120 PAK4O96013 591 aaPredicted RBP17.25■□□□□ 0.35
HPS3-202ENST00000460120 CHMP24386 653 aa17.25■□□□□ 0.35
HPS3-202ENST00000460120 ZNF750Q32MQ0 723 aa17.25■□□□□ 0.35
HPS3-202ENST00000460120 UBE2UQ5VVX9 321 aa17.25■□□□□ 0.35
HPS3-202ENST00000460120 C6orf120Q7Z4R8 191 aa17.25■□□□□ 0.35
HPS3-202ENST00000460120 WDR53Q7Z5U6 358 aaPredicted RBP17.25■□□□□ 0.35
HPS3-202ENST00000460120 ARMC8Q8IUR7 673 aa17.25■□□□□ 0.35
HPS3-202ENST00000460120 XAGE5Q8WWM1 108 aa17.25■□□□□ 0.35
HPS3-202ENST00000460120 CENPOQ9BU64 300 aa17.25■□□□□ 0.35
HPS3-202ENST00000460120 PALMDQ9NP74 551 aa17.25■□□□□ 0.35
HPS3-202ENST00000460120 EYSQ5T1H1 3165 aa17.25■□□□□ 0.35
HPS3-202ENST00000460120 ANHXE9PGG2 379 aa17.25■□□□□ 0.35
HPS3-202ENST00000460120 KPNA4O00629 521 aaPredicted RBP17.25■□□□□ 0.35
HPS3-202ENST00000460120 MID1O15344 667 aa17.25■□□□□ 0.35
HPS3-202ENST00000460120 SLC28A2O43868 658 aa17.25■□□□□ 0.35
HPS3-202ENST00000460120 OR10H3O60404 316 aa17.25■□□□□ 0.35
HPS3-202ENST00000460120 IFNA14P01570 189 aa17.25■□□□□ 0.35
HPS3-202ENST00000460120 DDCP20711 480 aa17.25■□□□□ 0.35
HPS3-202ENST00000460120 GPC1P35052 558 aa17.25■□□□□ 0.35
HPS3-202ENST00000460120 RPL3P39023 403 aaKnown RBP17.25■□□□□ 0.35
HPS3-202ENST00000460120 SEC23BQ15437 767 aa17.25■□□□□ 0.35
HPS3-202ENST00000460120 SYPL1Q16563 259 aa17.25■□□□□ 0.35
HPS3-202ENST00000460120 GAB4Q2WGN9 574 aa17.25■□□□□ 0.35
HPS3-202ENST00000460120 CRB2Q5IJ48 1285 aa17.25■□□□□ 0.35
HPS3-202ENST00000460120 DEPDC1Q5TB30 811 aa17.25■□□□□ 0.35
HPS3-202ENST00000460120 LRRTM4Q86VH4 590 aa17.25■□□□□ 0.35
HPS3-202ENST00000460120 LACC1Q8IV20 430 aa17.25■□□□□ 0.35
HPS3-202ENST00000460120 PSD4Q8NDX1 1056 aa17.25■□□□□ 0.35
HPS3-202ENST00000460120 TMIEQ8NEW7 156 aa17.25■□□□□ 0.35
HPS3-202ENST00000460120 UBE2E3Q969T4 207 aa17.25■□□□□ 0.35
HPS3-202ENST00000460120 COL21A1Q96P44 957 aa17.25■□□□□ 0.35
HPS3-202ENST00000460120 ZNF717Q9BY31 904 aaPredicted RBP17.25■□□□□ 0.35
HPS3-202ENST00000460120 DSN1Q9H410 356 aa17.25■□□□□ 0.35
HPS3-202ENST00000460120 DNAJC27Q9NZQ0 273 aa17.25■□□□□ 0.35
HPS3-202ENST00000460120 SERGEFQ9UGK8 458 aa17.25■□□□□ 0.35
HPS3-202ENST00000460120 OR12D1P0DN82 309 aa17.24■□□□□ 0.35
HPS3-202ENST00000460120 CKMT1AP12532 417 aa17.24■□□□□ 0.35
HPS3-202ENST00000460120 PCBP3P57721 371 aaKnown RBP17.24■□□□□ 0.35
HPS3-202ENST00000460120 CDK3Q00526 305 aa17.24■□□□□ 0.35
HPS3-202ENST00000460120 SLC13A2Q13183 592 aa17.24■□□□□ 0.35
HPS3-202ENST00000460120 DOC2BQ14184 412 aa17.24■□□□□ 0.35
HPS3-202ENST00000460120 WSCD2Q2TBF2 565 aa17.24■□□□□ 0.35
HPS3-202ENST00000460120 PNCKQ6P2M8 343 aa17.24■□□□□ 0.35
HPS3-202ENST00000460120 LCTLQ6UWM7 567 aa17.24■□□□□ 0.35
HPS3-202ENST00000460120 GPR32P1Q8NGA4 272 aa17.24■□□□□ 0.35
HPS3-202ENST00000460120 HCAR2Q8TDS4 363 aa17.24■□□□□ 0.35
HPS3-202ENST00000460120 ZNF514Q96K75 400 aaPredicted RBP17.24■□□□□ 0.35
HPS3-202ENST00000460120 SIGLEC11Q96RL6 698 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms