RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 ANKRD37Q7Z713 158 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 GPR180Q86V85 440 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 NUDT13Q86X67 352 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 SCUBE1Q8IWY4 988 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 HOMEZQ8IX15 550 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 PARP9Q8IXQ6 854 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 ZNF595Q8IYB9 648 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 C1orf52Q8N6N3 182 aaKnown RBP9.44□□□□□ -0.9
ATG4A-206ENST00000457035 AMER2Q8N7J2 671 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 GOLGA6L1Q8N7Z2 621 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 FAM47BQ8NA70 645 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 PPP1R14CQ8TAE6 165 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 MGARPQ8TDB4 240 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 ADAMTS18Q8TE60 1221 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 METTL21AQ8WXB1 218 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 TSLPQ969D9 159 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 UCN3Q969E3 161 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 TM4SF18Q96CE8 201 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 APIPQ96GX9 242 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 IMMP1LQ96LU5 166 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 FER1L6-AS2Q96M78 137 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 WDR77Q9BQA1 342 aaPredicted RBP9.44□□□□□ -0.9
ATG4A-206ENST00000457035 TRIM55Q9BYV6 548 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 SEMA4CQ9C0C4 833 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 NECTIN3Q9NQS3 549 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 PRTFDC1Q9NRG1 225 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 MS4A12Q9NXJ0 267 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 HAO1Q9UJM8 370 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 FBXL4Q9UKA2 621 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.44□□□□□ -0.9
ATG4A-206ENST00000457035 MMACHCQ9Y4U1 282 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 PTGDR2Q9Y5Y4 395 aa9.44□□□□□ -0.9
ATG4A-206ENST00000457035 IGHV1-45A0A0A0MS14 117 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 IGHV3-20A0A0C4DH32 117 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 TCRBV16S1A1N1A0A5B0 115 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 BLACEA4D250 179 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 PYCARD-AS1I3L0S3 204 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 CLDN4O14493 209 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 SNNO75324 88 aaPredicted RBP9.43□□□□□ -0.9
ATG4A-206ENST00000457035 CEACAM4O75871 244 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 DNAJB5O75953 348 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 SNUPNO95149 360 aaKnown RBP9.43□□□□□ -0.9
ATG4A-206ENST00000457035 LINC00032P0C843 101 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 ACPPP15309 386 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 MAOAP21397 527 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 CPN2P22792 545 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 PRPH2P23942 346 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 CCL11P51671 97 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 RRADP55042 308 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 GUCA2AQ02747 115 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 BTKQ06187 659 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 Q0VFX4 171 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 BST1Q10588 318 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 CHAF1BQ13112 559 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 SH2D4BQ5SQS7 431 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 CCNYL2Q5T2Q4 361 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 CPZQ66K79 652 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 CYP20A1Q6UW02 462 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 EXD3Q8N9H8 876 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 OR2T11Q8NH01 316 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 ANKRD9Q96BM1 317 aaPredicted RBP9.43□□□□□ -0.9
ATG4A-206ENST00000457035 WBP1Q96G27 269 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 METTL2AQ96IZ6 378 aaKnown RBP9.43□□□□□ -0.9
ATG4A-206ENST00000457035 VPS50Q96JG6 964 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 ILKAPQ9H0C8 392 aaPredicted RBP9.43□□□□□ -0.9
ATG4A-206ENST00000457035 ZNF700Q9H0M5 742 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 RPF2Q9H7B2 306 aaKnown RBP9.43□□□□□ -0.9
ATG4A-206ENST00000457035 MANSC1Q9H8J5 431 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 ATP13A2Q9NQ11 1180 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 LYARQ9NX58 379 aaKnown RBP9.43□□□□□ -0.9
ATG4A-206ENST00000457035 PHF11Q9UIL8 331 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 MCM8Q9UJA3 840 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 MRPS33Q9Y291 106 aaKnown RBP9.43□□□□□ -0.9
ATG4A-206ENST00000457035 FIS1Q9Y3D6 152 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 RAP2CQ9Y3L5 183 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 SPACA6W5XKT8 324 aa9.43□□□□□ -0.9
ATG4A-206ENST00000457035 KALRNO60229 2985 aa9.42□□□□□ -0.9
ATG4A-206ENST00000457035 RP1L1Q8IWN7 2480 aaPredicted RBP9.42□□□□□ -0.9
ATG4A-206ENST00000457035 J3QKU1 62 aa9.42□□□□□ -0.9
ATG4A-206ENST00000457035 SLC28A1O00337 649 aa9.42□□□□□ -0.9
ATG4A-206ENST00000457035 PGRMC2O15173 223 aa9.42□□□□□ -0.9
ATG4A-206ENST00000457035 ATP8B1O43520 1251 aa9.42□□□□□ -0.9
ATG4A-206ENST00000457035 LDB3O75112 727 aa9.42□□□□□ -0.9
ATG4A-206ENST00000457035 PRKRAO75569 313 aaKnown RBP9.42□□□□□ -0.9
ATG4A-206ENST00000457035 RSL1D1O76021 490 aaKnown RBP9.42□□□□□ -0.9
ATG4A-206ENST00000457035 HSPA4LO95757 839 aa9.42□□□□□ -0.9
ATG4A-206ENST00000457035 HPP00738 406 aa9.42□□□□□ -0.9
ATG4A-206ENST00000457035 NEFHP12036 1026 aa9.42□□□□□ -0.9
ATG4A-206ENST00000457035 TLX1P31314 330 aaPredicted RBP9.42□□□□□ -0.9
ATG4A-206ENST00000457035 RPL14P50914 215 aaKnown RBP9.42□□□□□ -0.9
ATG4A-206ENST00000457035 POLE2P56282 527 aa9.42□□□□□ -0.9
ATG4A-206ENST00000457035 OR4D2P58180 307 aa9.42□□□□□ -0.9
ATG4A-206ENST00000457035 TRA2BP62995 288 aaKnown RBP9.42□□□□□ -0.9
ATG4A-206ENST00000457035 PPP2R2AP63151 447 aa9.42□□□□□ -0.9
ATG4A-206ENST00000457035 IGLV3-21P80748 117 aaPredicted RBP9.42□□□□□ -0.9
ATG4A-206ENST00000457035 TNFRSF17Q02223 184 aa9.42□□□□□ -0.9
ATG4A-206ENST00000457035 EEF1A2Q05639 463 aaKnown RBP9.42□□□□□ -0.9
ATG4A-206ENST00000457035 ACSM2AQ08AH3 577 aa9.42□□□□□ -0.9
ATG4A-206ENST00000457035 AIMP2Q13155 320 aaKnown RBP9.42□□□□□ -0.9
ATG4A-206ENST00000457035 SLC13A2Q13183 592 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms