RNA–Protein interactions for RNA: ENST00000453358.5

PTPA-224, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-224ENST00000453358 SERINC2Q96SA4 455 aa11.92□□□□□ -0.5
PTPA-224ENST00000453358 REXO4Q9GZR2 422 aaKnown RBP11.92□□□□□ -0.5
PTPA-224ENST00000453358 LZTFL1Q9NQ48 299 aa11.92□□□□□ -0.5
PTPA-224ENST00000453358 CORO1CQ9ULV4 474 aaPredicted RBP11.92□□□□□ -0.5
PTPA-224ENST00000453358 ARHGAP21Q5T5U3 1957 aa11.92□□□□□ -0.5
PTPA-224ENST00000453358 MPDZO75970 2070 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 ANK3Q12955 4377 aaKnown RBP11.91□□□□□ -0.5
PTPA-224ENST00000453358 NPEPPSL1A6NEC2 478 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 LRRC3CA6NJW4 275 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 C17orf105B2RV13 164 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 KDM4EB2RXH2 506 aaPredicted RBP11.91□□□□□ -0.5
PTPA-224ENST00000453358 CDC7O00311 574 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 DVL2O14641 736 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 WDR47O94967 919 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 ETHE1O95571 254 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 ZNF37AP17032 561 aaPredicted RBP11.91□□□□□ -0.5
PTPA-224ENST00000453358 TNNI3P19429 210 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 BMP5P22003 454 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 TACR1P25103 407 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 HOXC12P31275 282 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 CEACAM8P31997 349 aaPredicted RBP11.91□□□□□ -0.5
PTPA-224ENST00000453358 SLC6A12P48065 614 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 MTTPP55157 894 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 CDKL1Q00532 357 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 ASPHQ12797 758 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 STX4Q12846 297 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 RCN2Q14257 317 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 CYP1B1Q16678 543 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 MPEG1Q2M385 716 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 C18orf21Q32NC0 220 aaPredicted RBP11.91□□□□□ -0.5
PTPA-224ENST00000453358 ZNF791Q3KP31 576 aaPredicted RBP11.91□□□□□ -0.5
PTPA-224ENST00000453358 MSS51Q4VC12 460 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 PIGGQ5H8A4 983 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 SPANXN3Q5MJ09 141 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 TEDDM1Q5T9Z0 273 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 RNASEH2BQ5TBB1 312 aaKnown RBP11.91□□□□□ -0.5
PTPA-224ENST00000453358 SLC22A10Q63ZE4 541 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 FAM45BPQ6NSW5 357 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 TRIM40Q6P9F5 258 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 POMZP3Q6PJE2 187 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 LYPD8Q6UX82 237 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 KRT78Q8N1N4 520 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 FAM45AQ8TCE6 357 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 ZNF721Q8TF20 911 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 CERS2Q96G23 380 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 C18orf12Q96KH6 178 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 EGFL8Q99944 293 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 SLC6A15Q9H2J7 730 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 NT5DC2Q9H857 520 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 PLAC1Q9HBJ0 212 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 PROK2Q9HC23 129 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 ZFP64Q9NPA5 681 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 ACKR4Q9NPB9 350 aa11.91□□□□□ -0.5
PTPA-224ENST00000453358 TLN2Q9Y4G6 2542 aa11.9□□□□□ -0.5
PTPA-224ENST00000453358 LDB3O75112 727 aa11.9□□□□□ -0.5
PTPA-224ENST00000453358 GDF5P43026 501 aa11.9□□□□□ -0.5
PTPA-224ENST00000453358 HNMTP50135 292 aa11.9□□□□□ -0.5
PTPA-224ENST00000453358 KCNJ2P63252 427 aa11.9□□□□□ -0.5
PTPA-224ENST00000453358 ID2Q02363 134 aa11.9□□□□□ -0.5
PTPA-224ENST00000453358 SERTAD2Q14140 314 aa11.9□□□□□ -0.5
PTPA-224ENST00000453358 KEAP1Q14145 624 aa11.9□□□□□ -0.5
PTPA-224ENST00000453358 ACSF3Q4G176 576 aaPredicted RBP11.9□□□□□ -0.5
PTPA-224ENST00000453358 ADNP2Q6IQ32 1131 aa11.9□□□□□ -0.5
PTPA-224ENST00000453358 CCDC137Q6PK04 289 aaKnown RBP11.9□□□□□ -0.5
PTPA-224ENST00000453358 ZNF662Q6ZS27 426 aa11.9□□□□□ -0.5
PTPA-224ENST00000453358 KRTAP1-3Q8IUG1 177 aa11.9□□□□□ -0.5
PTPA-224ENST00000453358 IGDCC3Q8IVU1 814 aa11.9□□□□□ -0.5
PTPA-224ENST00000453358 LRRC25Q8N386 305 aaPredicted RBP11.9□□□□□ -0.5
PTPA-224ENST00000453358 TNIP2Q8NFZ5 429 aa11.9□□□□□ -0.5
PTPA-224ENST00000453358 TRIM58Q8NG06 486 aa11.9□□□□□ -0.5
PTPA-224ENST00000453358 NEIL3Q8TAT5 605 aa11.9□□□□□ -0.5
PTPA-224ENST00000453358 NUBPLQ8TB37 319 aa11.9□□□□□ -0.5
PTPA-224ENST00000453358 PAQR8Q8TEZ7 354 aa11.9□□□□□ -0.5
PTPA-224ENST00000453358 ANKRD7Q92527 254 aa11.9□□□□□ -0.5
PTPA-224ENST00000453358 KIAA1191Q96A73 305 aa11.9□□□□□ -0.5
PTPA-224ENST00000453358 LRRC46Q96FV0 321 aa11.9□□□□□ -0.5
PTPA-224ENST00000453358 CAPZA3Q96KX2 299 aa11.9□□□□□ -0.5
PTPA-224ENST00000453358 RUNDC3BQ96NL0 473 aa11.9□□□□□ -0.5
PTPA-224ENST00000453358 PLEKHF2Q9H8W4 249 aa11.9□□□□□ -0.5
PTPA-224ENST00000453358 COPS7BQ9H9Q2 264 aaPredicted RBP11.9□□□□□ -0.5
PTPA-224ENST00000453358 PRDM7Q9NQW5 492 aa11.9□□□□□ -0.5
PTPA-224ENST00000453358 MTRF1LQ9UGC7 380 aaKnown RBP11.9□□□□□ -0.5
PTPA-224ENST00000453358 FOXD3Q9UJU5 478 aaPredicted RBP11.9□□□□□ -0.5
PTPA-224ENST00000453358 BOKQ9UMX3 212 aaPredicted RBP11.9□□□□□ -0.5
PTPA-224ENST00000453358 OARD1Q9Y530 152 aa11.9□□□□□ -0.5
PTPA-224ENST00000453358 NCKAP5O14513 1909 aa11.9□□□□□ -0.51
PTPA-224ENST00000453358 ANKDD1BA6NHY2 528 aa11.89□□□□□ -0.51
PTPA-224ENST00000453358 PRAMEF4O60810 478 aa11.89□□□□□ -0.51
PTPA-224ENST00000453358 INHBBP09529 407 aa11.89□□□□□ -0.51
PTPA-224ENST00000453358 EPXP11678 715 aa11.89□□□□□ -0.51
PTPA-224ENST00000453358 CDC25BP30305 580 aa11.89□□□□□ -0.51
PTPA-224ENST00000453358 HPDP32754 393 aaPredicted RBP11.89□□□□□ -0.51
PTPA-224ENST00000453358 WNT3P56703 355 aa11.89□□□□□ -0.51
PTPA-224ENST00000453358 PRAMEF20Q5VT98 475 aa11.89□□□□□ -0.51
PTPA-224ENST00000453358 PRAMEF9Q5VWM5 478 aa11.89□□□□□ -0.51
PTPA-224ENST00000453358 TRMT10BQ6PF06 316 aaKnown RBP11.89□□□□□ -0.51
PTPA-224ENST00000453358 ZNF793Q6ZN11 406 aa11.89□□□□□ -0.51
PTPA-224ENST00000453358 UBE3DQ7Z6J8 389 aa11.89□□□□□ -0.51
PTPA-224ENST00000453358 C9orf40Q8IXQ3 194 aa11.89□□□□□ -0.51
PTPA-224ENST00000453358 RASGEF1CQ8N431 466 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms