RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 ZFP36L2P47974 494 aaKnown RBP8.16□□□□□ -1.1
DEPDC1B-202ENST00000453022 ID2Q02363 134 aa8.16□□□□□ -1.1
DEPDC1B-202ENST00000453022 MGAT5Q09328 741 aa8.16□□□□□ -1.1
DEPDC1B-202ENST00000453022 SNTB1Q13884 538 aaKnown RBP8.16□□□□□ -1.1
DEPDC1B-202ENST00000453022 DOC2AQ14183 400 aa8.16□□□□□ -1.1
DEPDC1B-202ENST00000453022 MORF4L2Q15014 288 aa8.16□□□□□ -1.1
DEPDC1B-202ENST00000453022 TGFBIQ15582 683 aa8.16□□□□□ -1.1
DEPDC1B-202ENST00000453022 FAM47EQ6ZV65 393 aa8.16□□□□□ -1.1
DEPDC1B-202ENST00000453022 CLYBLQ8N0X4 340 aa8.16□□□□□ -1.1
DEPDC1B-202ENST00000453022 PDIK1LQ8N165 341 aa8.16□□□□□ -1.1
DEPDC1B-202ENST00000453022 SPATA6LQ8N4H0 392 aa8.16□□□□□ -1.1
DEPDC1B-202ENST00000453022 OR8K3Q8NH51 312 aa8.16□□□□□ -1.1
DEPDC1B-202ENST00000453022 ZNF721Q8TF20 911 aa8.16□□□□□ -1.1
DEPDC1B-202ENST00000453022 DAZLQ92904 295 aaKnown RBP8.16□□□□□ -1.1
DEPDC1B-202ENST00000453022 ESAMQ96AP7 390 aa8.16□□□□□ -1.1
DEPDC1B-202ENST00000453022 LRRC39Q96DD0 335 aa8.16□□□□□ -1.1
DEPDC1B-202ENST00000453022 WDR34Q96EX3 536 aa8.16□□□□□ -1.1
DEPDC1B-202ENST00000453022 F2RL3Q96RI0 385 aa8.16□□□□□ -1.1
DEPDC1B-202ENST00000453022 MAPKAP1Q9BPZ7 522 aa8.16□□□□□ -1.1
DEPDC1B-202ENST00000453022 PITHD1Q9GZP4 211 aaPredicted RBP8.16□□□□□ -1.1
DEPDC1B-202ENST00000453022 LIME1Q9H400 295 aa8.16□□□□□ -1.1
DEPDC1B-202ENST00000453022 EHD1Q9H4M9 534 aa8.16□□□□□ -1.1
DEPDC1B-202ENST00000453022 COPS7BQ9H9Q2 264 aaPredicted RBP8.16□□□□□ -1.1
DEPDC1B-202ENST00000453022 SACM1LQ9NTJ5 587 aa8.16□□□□□ -1.1
DEPDC1B-202ENST00000453022 ZNF358Q9NW07 568 aa8.16□□□□□ -1.1
DEPDC1B-202ENST00000453022 GPRC5BQ9NZH0 403 aa8.16□□□□□ -1.1
DEPDC1B-202ENST00000453022 SNX12Q9UMY4 172 aa8.16□□□□□ -1.1
DEPDC1B-202ENST00000453022 DOCK7Q96N67 2140 aa8.16□□□□□ -1.1
DEPDC1B-202ENST00000453022 ATP6AP2A0A1C7CYW4 349 aa8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 SYNDIG1LA6NDD5 238 aa8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 HRKO00198 91 aa8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 RTCAO00442 366 aaKnown RBP8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 CES2O00748 559 aa8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 WDR1O75083 606 aa8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 CTAG2O75638 210 aa8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 ATP6AP2O75787 350 aa8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 NADKO95544 446 aaPredicted RBP8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 RFPL3SP0C7P2 107 aa8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 GGT5P36269 586 aa8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 PIGAP37287 484 aa8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 KCNC1P48547 511 aa8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 HSPA7P48741 367 aa8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 MAN2A2P49641 1150 aa8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 STX4Q12846 297 aa8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 EFTUD2Q15029 972 aaKnown RBP eCLIP8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 OR4D1Q15615 310 aa8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 C1orf185Q5T7R7 199 aa8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 LYPD8Q6UX82 237 aa8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 C9orf40Q8IXQ3 194 aa8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 ZZZ3Q8IYH5 903 aa8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 ANKRD9Q96BM1 317 aaPredicted RBP8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 PTCD3Q96EY7 689 aaKnown RBP8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 VPS39Q96JC1 886 aa8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 KCNC2Q96PR1 638 aa8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 FOXC2Q99958 501 aa8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 MS4A8Q9BY19 250 aa8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 DERL2Q9GZP9 239 aa8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 RHOJQ9H4E5 214 aa8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 ZNF703Q9H7S9 590 aaPredicted RBP8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 CAB39LQ9H9S4 337 aa8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 POPDC3Q9HBV1 291 aa8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 LYRM4Q9HD34 91 aa8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 SH2D2AQ9NP31 389 aa8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 SMYD2Q9NRG4 433 aa8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 CCM2LQ9NUG4 571 aaPredicted RBP8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 DNAJC11Q9NVH1 559 aa8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 TRMT1Q9NXH9 659 aaKnown RBP8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 DNAJB12Q9NXW2 375 aaKnown RBP8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 MOCS1Q9NZB8 636 aa8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 WWOXQ9NZC7 414 aa8.15□□□□□ -1.1
DEPDC1B-202ENST00000453022 NAV3Q8IVL0 2385 aa8.14□□□□□ -1.11
DEPDC1B-202ENST00000453022 FAM221AA4D161 298 aa8.14□□□□□ -1.11
DEPDC1B-202ENST00000453022 LRRC3CA6NJW4 275 aa8.14□□□□□ -1.11
DEPDC1B-202ENST00000453022 CLGNO14967 610 aa8.14□□□□□ -1.11
DEPDC1B-202ENST00000453022 FGF17O60258 216 aa8.14□□□□□ -1.11
DEPDC1B-202ENST00000453022 SEC31AO94979 1220 aaKnown RBP8.14□□□□□ -1.11
DEPDC1B-202ENST00000453022 SCELO95171 688 aa8.14□□□□□ -1.11
DEPDC1B-202ENST00000453022 IGKV3-11P04433 115 aa8.14□□□□□ -1.11
DEPDC1B-202ENST00000453022 P04436 131 aa8.14□□□□□ -1.11
DEPDC1B-202ENST00000453022 CD99P14209 185 aa8.14□□□□□ -1.11
DEPDC1B-202ENST00000453022 HOXB4P17483 251 aaPredicted RBP8.14□□□□□ -1.11
DEPDC1B-202ENST00000453022 ATP5A1P25705 553 aaKnown RBP8.14□□□□□ -1.11
DEPDC1B-202ENST00000453022 HPDP32754 393 aaPredicted RBP8.14□□□□□ -1.11
DEPDC1B-202ENST00000453022 IGLV3-21P80748 117 aaPredicted RBP8.14□□□□□ -1.11
DEPDC1B-202ENST00000453022 ASPHQ12797 758 aa8.14□□□□□ -1.11
DEPDC1B-202ENST00000453022 SERTAD2Q14140 314 aa8.14□□□□□ -1.11
DEPDC1B-202ENST00000453022 E2F2Q14209 437 aa8.14□□□□□ -1.11
DEPDC1B-202ENST00000453022 MPEG1Q2M385 716 aa8.14□□□□□ -1.11
DEPDC1B-202ENST00000453022 ZNF791Q3KP31 576 aaPredicted RBP8.14□□□□□ -1.11
DEPDC1B-202ENST00000453022 OPN5Q6U736 354 aa8.14□□□□□ -1.11
DEPDC1B-202ENST00000453022 ARSKQ6UWY0 536 aa8.14□□□□□ -1.11
DEPDC1B-202ENST00000453022 DGAT2L6Q6ZPD8 337 aa8.14□□□□□ -1.11
DEPDC1B-202ENST00000453022 SEM1Q6ZVN7 128 aa8.14□□□□□ -1.11
DEPDC1B-202ENST00000453022 TGIF2LYQ8IUE0 185 aa8.14□□□□□ -1.11
DEPDC1B-202ENST00000453022 ACOT4Q8N9L9 421 aa8.14□□□□□ -1.11
DEPDC1B-202ENST00000453022 RELL2Q8NC24 303 aaPredicted RBP8.14□□□□□ -1.11
DEPDC1B-202ENST00000453022 FBXO36Q8NEA4 188 aa8.14□□□□□ -1.11
DEPDC1B-202ENST00000453022 NINJ1Q92982 152 aa8.14□□□□□ -1.11
DEPDC1B-202ENST00000453022 KIAA1191Q96A73 305 aa8.14□□□□□ -1.11
DEPDC1B-202ENST00000453022 SGCZQ96LD1 299 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms