RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 C16orf52Q8NHV5 167 aa14.93□□□□□ -0.02
SGCE-208ENST00000450385 PTPMT1Q8WUK0 201 aaPredicted RBP14.93□□□□□ -0.02
SGCE-208ENST00000450385 NCLNQ969V3 563 aa14.93□□□□□ -0.02
SGCE-208ENST00000450385 RBM18Q96H35 190 aaKnown RBP14.93□□□□□ -0.02
SGCE-208ENST00000450385 SGCZQ96LD1 299 aa14.93□□□□□ -0.02
SGCE-208ENST00000450385 PAFAH2Q99487 392 aa14.93□□□□□ -0.02
SGCE-208ENST00000450385 MRPL57Q9BQC6 102 aaKnown RBP14.93□□□□□ -0.02
SGCE-208ENST00000450385 VPS11Q9H270 941 aa14.93□□□□□ -0.02
SGCE-208ENST00000450385 RUBCNLQ9H714 662 aa14.93□□□□□ -0.02
SGCE-208ENST00000450385 RPF2Q9H7B2 306 aaKnown RBP14.93□□□□□ -0.02
SGCE-208ENST00000450385 DDX31Q9H8H2 851 aaKnown RBP14.93□□□□□ -0.02
SGCE-208ENST00000450385 PRM3Q9NNZ6 103 aa14.93□□□□□ -0.02
SGCE-208ENST00000450385 DMRT3Q9NQL9 472 aa14.93□□□□□ -0.02
SGCE-208ENST00000450385 LYARQ9NX58 379 aaKnown RBP14.93□□□□□ -0.02
SGCE-208ENST00000450385 ANKRD10Q9NXR5 420 aa14.93□□□□□ -0.02
SGCE-208ENST00000450385 AHSPQ9NZD4 102 aa14.93□□□□□ -0.02
SGCE-208ENST00000450385 COPS7AQ9UBW8 275 aa14.93□□□□□ -0.02
SGCE-208ENST00000450385 FETUBQ9UGM5 382 aa14.93□□□□□ -0.02
SGCE-208ENST00000450385 FBXW2Q9UKT8 454 aa14.93□□□□□ -0.02
SGCE-208ENST00000450385 KLF2Q9Y5W3 355 aaPredicted RBP14.93□□□□□ -0.02
SGCE-208ENST00000450385 PCNX1Q96RV3 2341 aa14.92□□□□□ -0.02
SGCE-208ENST00000450385 SLC19A2O60779 497 aa14.92□□□□□ -0.02
SGCE-208ENST00000450385 ACSL3O95573 720 aa14.92□□□□□ -0.02
SGCE-208ENST00000450385 SNRPAP09012 282 aaKnown RBP14.92□□□□□ -0.02
SGCE-208ENST00000450385 HNRNPFP52597 415 aaKnown RBP14.92□□□□□ -0.02
SGCE-208ENST00000450385 IRF9Q00978 393 aa14.92□□□□□ -0.02
SGCE-208ENST00000450385 MPEG1Q2M385 716 aa14.92□□□□□ -0.02
SGCE-208ENST00000450385 TIFABQ6ZNK6 161 aa14.92□□□□□ -0.02
SGCE-208ENST00000450385 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.92□□□□□ -0.02
SGCE-208ENST00000450385 FJX1Q86VR8 437 aa14.92□□□□□ -0.02
SGCE-208ENST00000450385 SPPL2CQ8IUH8 684 aa14.92□□□□□ -0.02
SGCE-208ENST00000450385 SIAH3Q8IW03 269 aa14.92□□□□□ -0.02
SGCE-208ENST00000450385 DND1Q8IYX4 353 aaKnown RBP14.92□□□□□ -0.02
SGCE-208ENST00000450385 CYP4Z2PQ8N1L4 340 aa14.92□□□□□ -0.02
SGCE-208ENST00000450385 SLC15A4Q8N697 577 aa14.92□□□□□ -0.02
SGCE-208ENST00000450385 TMEM52Q8NDY8 209 aa14.92□□□□□ -0.02
SGCE-208ENST00000450385 MRRFQ96E11 262 aaKnown RBP14.92□□□□□ -0.02
SGCE-208ENST00000450385 MAGED4Q96JG8 741 aa14.92□□□□□ -0.02
SGCE-208ENST00000450385 SERPINI1Q99574 410 aa14.92□□□□□ -0.02
SGCE-208ENST00000450385 MAPKAP1Q9BPZ7 522 aa14.92□□□□□ -0.02
SGCE-208ENST00000450385 WDR41Q9HAD4 459 aa14.92□□□□□ -0.02
SGCE-208ENST00000450385 ADAM29Q9UKF5 820 aa14.92□□□□□ -0.02
SGCE-208ENST00000450385 ITPR2Q14571 2701 aa14.92□□□□□ -0.02
SGCE-208ENST00000450385 CYSRT1A8MQ03 144 aa14.91□□□□□ -0.02
SGCE-208ENST00000450385 TGFBR3LH3BV60 316 aa14.91□□□□□ -0.02
SGCE-208ENST00000450385 PLPP1O14494 284 aa14.91□□□□□ -0.02
SGCE-208ENST00000450385 PROM1O43490 865 aa14.91□□□□□ -0.02
SGCE-208ENST00000450385 TNNI3P19429 210 aa14.91□□□□□ -0.02
SGCE-208ENST00000450385 ECHS1P30084 290 aa14.91□□□□□ -0.02
SGCE-208ENST00000450385 STT3AP46977 705 aa14.91□□□□□ -0.02
SGCE-208ENST00000450385 CCNG1P51959 295 aa14.91□□□□□ -0.02
SGCE-208ENST00000450385 GGTA1PQ4G0N0 100 aa14.91□□□□□ -0.02
SGCE-208ENST00000450385 ZNF468Q5VIY5 522 aaPredicted RBP14.91□□□□□ -0.02
SGCE-208ENST00000450385 MRM1Q6IN84 353 aaKnown RBP14.91□□□□□ -0.02
SGCE-208ENST00000450385 ADNP2Q6IQ32 1131 aa14.91□□□□□ -0.02
SGCE-208ENST00000450385 OPN5Q6U736 354 aa14.91□□□□□ -0.02
SGCE-208ENST00000450385 GOLGA7Q7Z5G4 137 aa14.91□□□□□ -0.02
SGCE-208ENST00000450385 ZNF227Q86WZ6 799 aa14.91□□□□□ -0.02
SGCE-208ENST00000450385 ZNF808Q8N4W9 903 aaPredicted RBP14.91□□□□□ -0.02
SGCE-208ENST00000450385 EIF1ADQ8N9N8 165 aaKnown RBP14.91□□□□□ -0.02
SGCE-208ENST00000450385 ZFP62Q8NB50 900 aaPredicted RBP14.91□□□□□ -0.02
SGCE-208ENST00000450385 GOLM1Q8NBJ4 401 aa14.91□□□□□ -0.02
SGCE-208ENST00000450385 NUBPLQ8TB37 319 aa14.91□□□□□ -0.02
SGCE-208ENST00000450385 WDR20Q8TBZ3 569 aa14.91□□□□□ -0.02
SGCE-208ENST00000450385 ATP6V1E2Q96A05 226 aa14.91□□□□□ -0.02
SGCE-208ENST00000450385 ANKRD9Q96BM1 317 aaPredicted RBP14.91□□□□□ -0.02
SGCE-208ENST00000450385 CSF3RQ99062 836 aa14.91□□□□□ -0.02
SGCE-208ENST00000450385 MTERF1Q99551 399 aaKnown RBP14.91□□□□□ -0.02
SGCE-208ENST00000450385 C1QTNF3Q9BXJ4 246 aa14.91□□□□□ -0.02
SGCE-208ENST00000450385 MRPL46Q9H2W6 279 aaKnown RBP14.91□□□□□ -0.02
SGCE-208ENST00000450385 OR51B5Q9H339 312 aa14.91□□□□□ -0.02
SGCE-208ENST00000450385 NMRK1Q9NWW6 199 aa14.91□□□□□ -0.02
SGCE-208ENST00000450385 CPSF2Q9P2I0 782 aaKnown RBP14.91□□□□□ -0.02
SGCE-208ENST00000450385 ZNF223Q9UK11 482 aaPredicted RBP14.91□□□□□ -0.02
SGCE-208ENST00000450385 NOTCH2Q04721 2471 aa14.9□□□□□ -0.02
SGCE-208ENST00000450385 TRGV8A0A0C4DH27 118 aa14.9□□□□□ -0.02
SGCE-208ENST00000450385 A1L4Q6 167 aa14.9□□□□□ -0.02
SGCE-208ENST00000450385 A8MVJ9 347 aa14.9□□□□□ -0.02
SGCE-208ENST00000450385 C17orf105B2RV13 164 aa14.9□□□□□ -0.02
SGCE-208ENST00000450385 CCL21O00585 134 aa14.9□□□□□ -0.02
SGCE-208ENST00000450385 ZG16O60844 167 aa14.9□□□□□ -0.02
SGCE-208ENST00000450385 ZNF24P17028 368 aa14.9□□□□□ -0.02
SGCE-208ENST00000450385 GMPRP36959 345 aa14.9□□□□□ -0.02
SGCE-208ENST00000450385 SMSP52788 366 aa14.9□□□□□ -0.02
SGCE-208ENST00000450385 RNF4P78317 190 aa14.9□□□□□ -0.02
SGCE-208ENST00000450385 PLIN5Q00G26 463 aa14.9□□□□□ -0.02
SGCE-208ENST00000450385 TNFRSF17Q02223 184 aa14.9□□□□□ -0.02
SGCE-208ENST00000450385 CPSF6Q16630 551 aaKnown RBP eCLIP14.9□□□□□ -0.02
SGCE-208ENST00000450385 C1QL3Q5VWW1 255 aa14.9□□□□□ -0.02
SGCE-208ENST00000450385 PAOXQ6QHF9 649 aa14.9□□□□□ -0.02
SGCE-208ENST00000450385 ADGRD1Q6QNK2 874 aa14.9□□□□□ -0.02
SGCE-208ENST00000450385 CYP20A1Q6UW02 462 aa14.9□□□□□ -0.02
SGCE-208ENST00000450385 PAGE2Q7Z2X7 111 aa14.9□□□□□ -0.02
SGCE-208ENST00000450385 MYLK4Q86YV6 388 aaPredicted RBP14.9□□□□□ -0.02
SGCE-208ENST00000450385 ST13P4Q8IZP2 240 aaPredicted RBP14.9□□□□□ -0.02
SGCE-208ENST00000450385 AMER2Q8N7J2 671 aa14.9□□□□□ -0.02
SGCE-208ENST00000450385 TRPC4APQ8TEL6 797 aa14.9□□□□□ -0.02
SGCE-208ENST00000450385 DCAKDQ8WVC6 231 aa14.9□□□□□ -0.02
SGCE-208ENST00000450385 ASB15Q8WXK1 588 aa14.9□□□□□ -0.02
SGCE-208ENST00000450385 DGAT2Q96PD7 388 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms