RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 MYO1GB0I1T2 1018 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 KIF1CO43896 1103 aaKnown RBP13.48□□□□□ -0.25
USP39-207ENST00000450066 TNFRSF21O75509 655 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 NR2F6P10588 404 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 BMP2P12643 396 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 IL1RNP18510 177 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 FASP25445 335 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 EPHA8P29322 1005 aaPredicted RBP13.48□□□□□ -0.25
USP39-207ENST00000450066 NTSP30990 170 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 CNR2P34972 360 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 HOXD12P35452 270 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 BUD31P41223 144 aaPredicted RBP13.48□□□□□ -0.25
USP39-207ENST00000450066 CRATP43155 626 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 PPM1FP49593 454 aaPredicted RBP13.48□□□□□ -0.25
USP39-207ENST00000450066 HSPB3Q12988 150 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 NR1D2Q14995 579 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 FAM98BQ52LJ0 330 aaKnown RBP13.48□□□□□ -0.25
USP39-207ENST00000450066 IZUMO2Q6UXV1 221 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 EID3Q8N140 333 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 CATSPER1Q8NEC5 780 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 OR5AK3PQ8NH89 298 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 ZFP28Q8NHY6 868 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 KLHL6Q8WZ60 621 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 NCSTNQ92542 709 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 NEURL3Q96EH8 262 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 TGM7Q96PF1 710 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 BBS4Q96RK4 519 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 SEPHS2Q99611 448 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 GLIPR2Q9H4G4 154 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 LYRM4Q9HD34 91 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 SIRT3Q9NTG7 399 aaPredicted RBP13.48□□□□□ -0.25
USP39-207ENST00000450066 DNAAF2Q9NVR5 837 aaKnown RBP13.48□□□□□ -0.25
USP39-207ENST00000450066 NLGN3Q9NZ94 848 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 ACSL6Q9UKU0 697 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 PSME2Q9UL46 239 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 DAPP1Q9UN19 280 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 MRPS2Q9Y399 296 aaKnown RBP13.48□□□□□ -0.25
USP39-207ENST00000450066 IGHV1OR21-1A0A087WYE8 117 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 RNF103-CHMP3A0A140T963 221 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 WASHC1A8K0Z3 465 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 ERAL1O75616 437 aaKnown RBP13.48□□□□□ -0.25
USP39-207ENST00000450066 FRYLO94915 3013 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 RAP2AP10114 183 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 HOXB6P17509 224 aaKnown RBP13.48□□□□□ -0.25
USP39-207ENST00000450066 LIM2P55344 173 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 GFERP55789 205 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 OR1D5P58170 312 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 TNFRSF17Q02223 184 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 RUNX2Q13950 521 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 CEBPEQ15744 281 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 GRAMD1BQ3KR37 738 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 COX20Q5RI15 118 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 NKAIN2Q5VXU1 208 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 HMBOX1Q6NT76 420 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 CEP68Q76N32 757 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 KANSL1Q7Z3B3 1105 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 RNF130Q86XS8 419 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 CARFQ8N187 725 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 C11orf65Q8NCR3 313 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 CNRIP1Q96F85 164 aaPredicted RBP13.48□□□□□ -0.25
USP39-207ENST00000450066 AHCYL2Q96HN2 611 aaKnown RBP13.48□□□□□ -0.25
USP39-207ENST00000450066 RNF145Q96MT1 663 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 DUSP23Q9BVJ7 150 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 CHID1Q9BWS9 393 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 ZSCAN32Q9NX65 697 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 RAPGEFL1Q9UHV5 662 aa13.48□□□□□ -0.25
USP39-207ENST00000450066 FAF1Q9UNN5 650 aaPredicted RBP13.48□□□□□ -0.25
USP39-207ENST00000450066 DMDP11532 3685 aa13.47□□□□□ -0.25
USP39-207ENST00000450066 GALR3O60755 368 aaPredicted RBP13.47□□□□□ -0.25
USP39-207ENST00000450066 SERPINA1P01009 418 aa13.47□□□□□ -0.25
USP39-207ENST00000450066 NUDT7P0C024 238 aa13.47□□□□□ -0.25
USP39-207ENST00000450066 ETFAP13804 333 aa13.47□□□□□ -0.25
USP39-207ENST00000450066 CPN2P22792 545 aa13.47□□□□□ -0.25
USP39-207ENST00000450066 TLX1P31314 330 aaPredicted RBP13.47□□□□□ -0.25
USP39-207ENST00000450066 PCGF2P35227 344 aa13.47□□□□□ -0.25
USP39-207ENST00000450066 NCBP2P52298 156 aaKnown RBP eCLIP13.47□□□□□ -0.253e-6■■□□□ 12.2
USP39-207ENST00000450066 GPLD1P80108 840 aa13.47□□□□□ -0.25
USP39-207ENST00000450066 CHRNB3Q05901 458 aa13.47□□□□□ -0.25
USP39-207ENST00000450066 RBBP4Q09028 425 aa13.47□□□□□ -0.25
USP39-207ENST00000450066 C16orf72Q14CZ0 275 aa13.47□□□□□ -0.25
USP39-207ENST00000450066 TAF11Q15544 211 aa13.47□□□□□ -0.25
USP39-207ENST00000450066 DEFB110Q30KQ9 67 aa13.47□□□□□ -0.25
USP39-207ENST00000450066 HLA-BQ31612 363 aa13.47□□□□□ -0.25
USP39-207ENST00000450066 SAXO2Q658L1 398 aa13.47□□□□□ -0.25
USP39-207ENST00000450066 PDSS2Q86YH6 399 aa13.47□□□□□ -0.25
USP39-207ENST00000450066 ARHGEF39Q8N4T4 335 aa13.47□□□□□ -0.25
USP39-207ENST00000450066 FBXO30Q8TB52 745 aa13.47□□□□□ -0.25
USP39-207ENST00000450066 SEMA6AQ9H2E6 1030 aa13.47□□□□□ -0.25
USP39-207ENST00000450066 TMEM38AQ9H6F2 299 aa13.47□□□□□ -0.25
USP39-207ENST00000450066 STARD5Q9NSY2 213 aa13.47□□□□□ -0.25
USP39-207ENST00000450066 GIMAP4Q9NUV9 329 aa13.47□□□□□ -0.25
USP39-207ENST00000450066 ENTPD4Q9Y227 616 aa13.47□□□□□ -0.25
USP39-207ENST00000450066 NAALAD2Q9Y3Q0 740 aa13.47□□□□□ -0.25
USP39-207ENST00000450066 MAP4K5Q9Y4K4 846 aa13.47□□□□□ -0.25
USP39-207ENST00000450066 V9GYQ6 96 aa13.47□□□□□ -0.25
USP39-207ENST00000450066 IGHV5-51A0A0C4DH38 117 aa13.46□□□□□ -0.25
USP39-207ENST00000450066 YKT6O15498 198 aa13.46□□□□□ -0.25
USP39-207ENST00000450066 TPST1O60507 370 aa13.46□□□□□ -0.25
USP39-207ENST00000450066 PRKD3O94806 890 aa13.46□□□□□ -0.25
USP39-207ENST00000450066 CSNK2A2P19784 350 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms