RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 MRPS5P82675 430 aaKnown RBP3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 SRSF3P84103 164 aaKnown RBP3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 SLC10A2Q12908 348 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 PDIA2Q13087 525 aaKnown RBP3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 CUL2Q13617 745 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 ALCAMQ13740 583 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 EXOSC2Q13868 293 aaKnown RBP3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 TFDP2Q14188 446 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 FASTKQ14296 549 aaKnown RBP3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 HNF4GQ14541 408 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 DRAP1Q14919 205 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 MAPK11Q15759 364 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 NEDD8Q15843 81 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 SSX2Q16385 188 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 CARTPTQ16568 116 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 DEFB115Q30KQ5 88 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 CDNFQ49AH0 187 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 EPC2Q52LR7 807 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 ARHGAP15Q53QZ3 475 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 OR2B11Q5JQS5 317 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 FAM26FQ5R3K3 315 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 MANEAQ5SRI9 462 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 HECTD3Q5T447 861 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 PLA2G4FQ68DD2 849 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 PTRHD1Q6GMV3 140 aaKnown RBP3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 LCN8Q6JVE9 175 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 TRMT10BQ6PF06 316 aaKnown RBP3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 C19orf48Q6RUI8 117 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 FAM111BQ6SJ93 734 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 EPGNQ6UW88 154 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 MPZL3Q6UWV2 235 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 MSANTD1Q6ZTZ1 278 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 SNX20Q7Z614 316 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 CAMKMTQ7Z624 323 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 RABEPKQ7Z6M1 372 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 P2RY8Q86VZ1 359 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 KRT73Q86Y46 540 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 C1QL4Q86Z23 238 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 SIAH1Q8IUQ4 282 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 PSTKQ8IV42 348 aaKnown RBP3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 NUDCD3Q8IVD9 361 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 DENND6AQ8IWF6 608 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 SKA3Q8IX90 412 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 YAF2Q8IY57 180 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 C8orf59Q8N0T1 100 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 ZNF619Q8N2I2 560 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 SLC44A3Q8N4M1 653 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 ARRDC1Q8N5I2 433 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 DHRSXQ8N5I4 330 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 ZNF557Q8N988 423 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 ITFG1Q8TB96 612 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 UBA3Q8TBC4 463 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 AGR3Q8TD06 166 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 GLYATL2Q8WU03 294 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 CHURC1Q8WUH1 139 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 RIT1Q92963 219 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 ATP6V1E2Q96A05 226 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 KIAA1143Q96AT1 154 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 EXOSC8Q96B26 276 aaKnown RBP3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 MRPL38Q96DV4 380 aaKnown RBP3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 CENPNQ96H22 339 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 RILPQ96NA2 401 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 SFXN2Q96NB2 322 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 ZNF285Q96NJ3 590 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 KCNA7Q96RP8 456 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 CCNL2Q96S94 520 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 PAFAH2Q99487 392 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 FAM118BQ9BPY3 351 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 WDR83Q9BRX9 315 aaKnown RBP3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 FEM1AQ9BSK4 669 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 NAT9Q9BTE0 207 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 DPH7Q9BTV6 452 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 NDC1Q9BTX1 674 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 STRA6Q9BX79 667 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 UGT2B28Q9BY64 529 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 ACPTQ9BZG2 426 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 SEMA4CQ9C0C4 833 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 ENKD1Q9H0I2 346 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 RIMS4Q9H426 269 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 DUSP21Q9H596 190 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 KCNK12Q9HB15 430 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 GPR35Q9HC97 309 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 VAT1LQ9HCJ6 419 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 ALG13Q9NP73 1137 aaKnown RBP3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 SDHAF2Q9NX18 166 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 SMPD3Q9NY59 655 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 TMOD3Q9NYL9 352 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 VSX1Q9NZR4 365 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 JKAMPQ9P055 326 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 COPZ2Q9P299 210 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 ERVK-18Q9QC07 812 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 METTL1Q9UBP6 276 aaKnown RBP3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 GIMAP2Q9UG22 337 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 OR12D3Q9UGF7 316 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 MID2Q9UJV3 735 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 SLC13A4Q9UKG4 626 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 PLCL2Q9UPR0 1127 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 BAIAP2Q9UQB8 552 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 BTBD3Q9Y2F9 522 aa3.46□□□□□ -1.86
HMGB3P8-201ENST00000449709 SLC6A5Q9Y345 797 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms