RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 INPP5JQ15735 1006 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-204ENST00000446876 H3F3CQ6NXT2 135 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 SCIMPQ6UWF3 145 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 FRMD7Q6ZUT3 714 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 C10orf107Q8IVU9 208 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 CISD2Q8N5K1 135 aaKnown RBP13.86□□□□□ -0.19
HDAC4-204ENST00000446876 MYRIPQ8NFW9 859 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 RDH11Q8TC12 318 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 METTL6Q8TCB7 284 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 ELP5Q8TE02 316 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 MIB2Q96AX9 1013 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 CCDC126Q96EE4 140 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 C19orf60Q96EN9 201 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 FAM111AQ96PZ2 611 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 TMEM109Q9BVC6 243 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 ALOXE3Q9BYJ1 711 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 SLC29A3Q9BZD2 475 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 SHCBP1LQ9BZQ2 653 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 IQCGQ9H095 443 aaKnown RBP13.86□□□□□ -0.19
HDAC4-204ENST00000446876 TNFRSF12AQ9NP84 129 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 ADAP2Q9NPF8 381 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 OXSMQ9NWU1 459 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 LYARQ9NX58 379 aaKnown RBP13.86□□□□□ -0.19
HDAC4-204ENST00000446876 MKS1Q9NXB0 559 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 TEX10Q9NXF1 929 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-204ENST00000446876 PHF11Q9UIL8 331 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 ZNF223Q9UK11 482 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-204ENST00000446876 PLLPQ9Y342 182 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 PCDHGA10Q9Y5H3 936 aa13.86□□□□□ -0.19
HDAC4-204ENST00000446876 TRBV11-1A0A0K0K1C0 115 aa13.85□□□□□ -0.19
HDAC4-204ENST00000446876 DYTNA2CJ06 578 aa13.85□□□□□ -0.19
HDAC4-204ENST00000446876 PROM1O43490 865 aa13.85□□□□□ -0.19
HDAC4-204ENST00000446876 WISP1O95388 367 aa13.85□□□□□ -0.19
HDAC4-204ENST00000446876 KRT6AP02538 564 aa13.85□□□□□ -0.19
HDAC4-204ENST00000446876 KRT6BP04259 564 aa13.85□□□□□ -0.19
HDAC4-204ENST00000446876 NR2F6P10588 404 aa13.85□□□□□ -0.19
HDAC4-204ENST00000446876 KRT6CP48668 564 aa13.85□□□□□ -0.19
HDAC4-204ENST00000446876 PKNOX1P55347 436 aa13.85□□□□□ -0.19
HDAC4-204ENST00000446876 DNAJB13P59910 316 aa13.85□□□□□ -0.19
HDAC4-204ENST00000446876 GALNT1Q10472 559 aaPredicted RBP13.85□□□□□ -0.19
HDAC4-204ENST00000446876 ZNF169Q14929 603 aaPredicted RBP13.85□□□□□ -0.19
HDAC4-204ENST00000446876 CFAP157Q5JU67 520 aa13.85□□□□□ -0.19
HDAC4-204ENST00000446876 ACER2Q5QJU3 275 aa13.85□□□□□ -0.19
HDAC4-204ENST00000446876 C10orf62Q5T681 223 aaPredicted RBP13.85□□□□□ -0.19
HDAC4-204ENST00000446876 COMMD6Q7Z4G1 85 aa13.85□□□□□ -0.19
HDAC4-204ENST00000446876 IQCKQ8N0W5 287 aa13.85□□□□□ -0.19
HDAC4-204ENST00000446876 METTL4Q8N3J2 472 aa13.85□□□□□ -0.19
HDAC4-204ENST00000446876 APCDD1LQ8NCL9 501 aa13.85□□□□□ -0.19
HDAC4-204ENST00000446876 B3GNT7Q8NFL0 401 aa13.85□□□□□ -0.19
HDAC4-204ENST00000446876 OR1N1Q8NGS0 311 aa13.85□□□□□ -0.19
HDAC4-204ENST00000446876 DOK4Q8TEW6 326 aa13.85□□□□□ -0.19
HDAC4-204ENST00000446876 NCLNQ969V3 563 aa13.85□□□□□ -0.19
HDAC4-204ENST00000446876 MECRQ9BV79 373 aa13.85□□□□□ -0.19
HDAC4-204ENST00000446876 ACPTQ9BZG2 426 aa13.85□□□□□ -0.19
HDAC4-204ENST00000446876 CDCP1Q9H5V8 836 aa13.85□□□□□ -0.19
HDAC4-204ENST00000446876 RPF2Q9H7B2 306 aaKnown RBP13.85□□□□□ -0.19
HDAC4-204ENST00000446876 BRF2Q9HAW0 419 aa13.85□□□□□ -0.19
HDAC4-204ENST00000446876 ANKRD10Q9NXR5 420 aa13.85□□□□□ -0.19
HDAC4-204ENST00000446876 STMN3Q9NZ72 180 aa13.85□□□□□ -0.19
HDAC4-204ENST00000446876 NTNG1Q9Y2I2 539 aa13.85□□□□□ -0.19
HDAC4-204ENST00000446876 HELZ2Q9BYK8 2649 aaKnown RBP13.85□□□□□ -0.19
HDAC4-204ENST00000446876 A0A1W2PS29 197 aa13.84□□□□□ -0.19
HDAC4-204ENST00000446876 PRKNO60260 465 aaPredicted RBP13.84□□□□□ -0.19
HDAC4-204ENST00000446876 ZIC2O95409 532 aaPredicted RBP13.84□□□□□ -0.19
HDAC4-204ENST00000446876 ESRRBO95718 433 aa13.84□□□□□ -0.19
HDAC4-204ENST00000446876 ENO1P06733 434 aaKnown RBP13.84□□□□□ -0.19
HDAC4-204ENST00000446876 BUD31P41223 144 aaPredicted RBP13.84□□□□□ -0.19
HDAC4-204ENST00000446876 TNFSF10P50591 281 aa13.84□□□□□ -0.19
HDAC4-204ENST00000446876 TAS2R50P59544 299 aa13.84□□□□□ -0.19
HDAC4-204ENST00000446876 HMGCS1Q01581 520 aa13.84□□□□□ -0.19
HDAC4-204ENST00000446876 FOLH1Q04609 750 aa13.84□□□□□ -0.19
HDAC4-204ENST00000446876 TBL3Q12788 808 aaKnown RBP13.84□□□□□ -0.19
HDAC4-204ENST00000446876 TLR1Q15399 786 aa13.84□□□□□ -0.19
HDAC4-204ENST00000446876 ELAVL1Q15717 326 aaKnown RBP13.84□□□□□ -0.19
HDAC4-204ENST00000446876 CCNYL2Q5T2Q4 361 aa13.84□□□□□ -0.19
HDAC4-204ENST00000446876 LIPMQ5VYY2 423 aa13.84□□□□□ -0.19
HDAC4-204ENST00000446876 DGAT2L6Q6ZPD8 337 aa13.84□□□□□ -0.19
HDAC4-204ENST00000446876 MMP21Q8N119 569 aa13.84□□□□□ -0.19
HDAC4-204ENST00000446876 SLC5A8Q8N695 610 aa13.84□□□□□ -0.19
HDAC4-204ENST00000446876 C1orf52Q8N6N3 182 aaKnown RBP13.84□□□□□ -0.19
HDAC4-204ENST00000446876 ZNF321PQ8N8H1 164 aa13.84□□□□□ -0.19
HDAC4-204ENST00000446876 TCP10LQ8TDR4 215 aa13.84□□□□□ -0.19
HDAC4-204ENST00000446876 THAP3Q8WTV1 239 aaPredicted RBP13.84□□□□□ -0.19
HDAC4-204ENST00000446876 PTPMT1Q8WUK0 201 aaPredicted RBP13.84□□□□□ -0.19
HDAC4-204ENST00000446876 PPWD1Q96BP3 646 aaKnown RBP13.84□□□□□ -0.19
HDAC4-204ENST00000446876 SNRNP40Q96DI7 357 aaKnown RBP13.84□□□□□ -0.19
HDAC4-204ENST00000446876 ZNF354BQ96LW1 612 aa13.84□□□□□ -0.19
HDAC4-204ENST00000446876 ZIM3Q96PE6 472 aa13.84□□□□□ -0.19
HDAC4-204ENST00000446876 SMC6Q96SB8 1091 aa13.84□□□□□ -0.19
HDAC4-204ENST00000446876 GATA5Q9BWX5 397 aaPredicted RBP13.84□□□□□ -0.19
HDAC4-204ENST00000446876 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.84□□□□□ -0.192e-6■■□□□ 12.4
HDAC4-204ENST00000446876 ASF1BQ9NVP2 202 aa13.84□□□□□ -0.19
HDAC4-204ENST00000446876 MS4A12Q9NXJ0 267 aa13.84□□□□□ -0.19
HDAC4-204ENST00000446876 VTI1BQ9UEU0 232 aa13.84□□□□□ -0.19
HDAC4-204ENST00000446876 TEKT2Q9UIF3 430 aa13.84□□□□□ -0.19
HDAC4-204ENST00000446876 STK38LQ9Y2H1 464 aa13.84□□□□□ -0.19
HDAC4-204ENST00000446876 BAHCC1Q9P281 2608 aa13.84□□□□□ -0.19
HDAC4-204ENST00000446876 BLACEA4D250 179 aa13.83□□□□□ -0.2
HDAC4-204ENST00000446876 OR5H15A6NDH6 313 aa13.83□□□□□ -0.2
HDAC4-204ENST00000446876 GABRR3A8MPY1 467 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms