RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 CYP27C1Q4G0S4 372 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 ALG1LQ6GMV1 187 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 TRMT11Q7Z4G4 463 aaKnown RBP7.57□□□□□ -1.2
SMG1-202ENST00000446231 SERPINA11Q86U17 422 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 COMMD2Q86X83 199 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 BEST4Q8NFU0 473 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 INSIG1O15503 277 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 PCGF2P35227 344 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 ARHGDIBP52566 201 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 GPR85P60893 370 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 AANATQ16613 207 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 CARD16Q5EG05 197 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 ZNF548Q8NEK5 533 aaPredicted RBP7.57□□□□□ -1.2
SMG1-202ENST00000446231 SLC35F5Q8WV83 523 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 HRGP04196 525 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 ARSDP51689 593 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 TSEN15Q8WW01 171 aaKnown RBP7.57□□□□□ -1.2
SMG1-202ENST00000446231 CYP2S1Q96SQ9 504 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 HAS3O00219 553 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 GMFGO60234 142 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 ADRB1P08588 477 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 ALAS2P22557 587 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 HK3P52790 923 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 BTN3A2P78410 334 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 PON3Q15166 354 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 METTL11BQ5VVY1 283 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 GPR20Q99678 358 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 TAS2R10Q9NYW0 307 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 TLX1P31314 330 aaPredicted RBP7.57□□□□□ -1.2
SMG1-202ENST00000446231 EPHB3P54753 998 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 MLLT10P55197 1068 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 POLR2LP62875 67 aaKnown RBP7.57□□□□□ -1.2
SMG1-202ENST00000446231 SLC38A6Q8IZM9 456 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 SNIP1Q8TAD8 396 aaKnown RBP7.57□□□□□ -1.2
SMG1-202ENST00000446231 CDADC1Q9BWV3 514 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 TRPV2Q9Y5S1 764 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 PRAMEF2O60811 474 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 TPOP07202 933 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 UQCRC2P22695 453 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 PEA15Q15121 130 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 ARNTLO00327 626 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 RAB3AP20336 220 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 RAP2BP61225 183 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 SCGB2B2Q4G0G5 96 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 PTRH1Q86Y79 214 aaKnown RBP7.56□□□□□ -1.2
SMG1-202ENST00000446231 NAALAD2Q9Y3Q0 740 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 C2orf92A0A1B0GVN3 265 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 KLRG2A4D1S0 409 aaPredicted RBP7.56□□□□□ -1.2
SMG1-202ENST00000446231 SRCP12931 536 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 SLC35F1Q5T1Q4 408 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 TRAPPC5Q8IUR0 188 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 BRD9Q9H8M2 597 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 ELL3Q9HB65 397 aaPredicted RBP7.56□□□□□ -1.2
SMG1-202ENST00000446231 PCTPQ9UKL6 214 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 NRCAMQ92823 1304 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 SLIT3O75094 1523 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 B4DXG7 233 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 RCBTB2O95199 551 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 C1QBP02746 253 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 AFF1P51825 1210 aaKnown RBP7.56□□□□□ -1.2
SMG1-202ENST00000446231 BRINP2Q9C0B6 783 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 SLC38A1Q9H2H9 487 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 SMCO4Q9NRQ5 59 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 SDC3O75056 442 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 KCNC1P48547 511 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 SERPINA9Q86WD7 417 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 CCDC3Q9BQI4 270 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 E7EQ34 232 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 GOSR2O14653 212 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 PDYNP01213 254 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 ISL1P61371 349 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 CREB5Q02930 508 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 RBBP4Q09028 425 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 TMEM69Q5SWH9 247 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 C9orf64Q5T6V5 341 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 NXNL2Q5VZ03 156 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 CATSPERGQ6ZRH7 1159 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 COPS5Q92905 334 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 SLC2A13Q96QE2 648 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 CSF3RQ99062 836 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 E9PI62 339 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 SMAD9O15198 467 aaKnown RBP7.56□□□□□ -1.2
SMG1-202ENST00000446231 PCDH7O60245 1069 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 ARSBP15848 533 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 SERPINA4P29622 427 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 TM4SF1P30408 202 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 NCBP2P52298 156 aaKnown RBP eCLIP7.56□□□□□ -1.2
SMG1-202ENST00000446231 PRR5P85299 388 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 RANBP3LQ86VV4 465 aaPredicted RBP7.56□□□□□ -1.2
SMG1-202ENST00000446231 CFAP52Q8N1V2 620 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 OR1J4Q8NGS1 313 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 TIFAQ96CG3 184 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 MARCH4Q9P2E8 410 aaPredicted RBP7.56□□□□□ -1.2
SMG1-202ENST00000446231 A0A1W2PRQ8 180 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 SNAPINO95295 136 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 IGSF6O95976 241 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 ART1P52961 327 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 HACD4Q5VWC8 232 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 MTFR2Q6P444 385 aa7.56□□□□□ -1.2
SMG1-202ENST00000446231 CEACAM20Q6UY09 585 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms