RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 PAPPA2Q9BXP8 1791 aa11.13□□□□□ -0.63
HCFC1-203ENST00000444191 TRAV6A0A075B6T7 132 aa11.13□□□□□ -0.63
HCFC1-203ENST00000444191 C2orf92A0A1B0GVN3 265 aa11.13□□□□□ -0.63
HCFC1-203ENST00000444191 KMOO15229 486 aa11.13□□□□□ -0.63
HCFC1-203ENST00000444191 CD160O95971 181 aa11.13□□□□□ -0.63
HCFC1-203ENST00000444191 PTTG1O95997 202 aa11.13□□□□□ -0.63
HCFC1-203ENST00000444191 OR12D1P0DN82 309 aa11.13□□□□□ -0.63
HCFC1-203ENST00000444191 PAICSP22234 425 aaKnown RBP11.13□□□□□ -0.63
HCFC1-203ENST00000444191 CTGFP29279 349 aa11.13□□□□□ -0.63
HCFC1-203ENST00000444191 CXCR4P61073 352 aa11.13□□□□□ -0.63
HCFC1-203ENST00000444191 FBXO43Q4G163 708 aa11.13□□□□□ -0.63
HCFC1-203ENST00000444191 C9orf64Q5T6V5 341 aa11.13□□□□□ -0.63
HCFC1-203ENST00000444191 ZNF730Q6ZMV8 503 aa11.13□□□□□ -0.63
HCFC1-203ENST00000444191 TEX47Q8TBZ9 253 aa11.13□□□□□ -0.63
HCFC1-203ENST00000444191 PIGKQ92643 395 aa11.13□□□□□ -0.63
HCFC1-203ENST00000444191 TESCQ96BS2 214 aa11.13□□□□□ -0.63
HCFC1-203ENST00000444191 ZNF558Q96NG5 402 aa11.13□□□□□ -0.63
HCFC1-203ENST00000444191 NRTNQ99748 197 aa11.13□□□□□ -0.63
HCFC1-203ENST00000444191 CLSTN3Q9BQT9 956 aa11.13□□□□□ -0.63
HCFC1-203ENST00000444191 TEX12Q9BXU0 123 aa11.13□□□□□ -0.63
HCFC1-203ENST00000444191 CCDC177Q9NQR7 707 aaPredicted RBP11.13□□□□□ -0.63
HCFC1-203ENST00000444191 FBXO8Q9NRD0 319 aa11.13□□□□□ -0.63
HCFC1-203ENST00000444191 ENOPH1Q9UHY7 261 aa11.13□□□□□ -0.63
HCFC1-203ENST00000444191 CCL27Q9Y4X3 112 aa11.13□□□□□ -0.63
HCFC1-203ENST00000444191 MEIOCA2RUB1 952 aa11.12□□□□□ -0.63
HCFC1-203ENST00000444191 WASHC1A8K0Z3 465 aa11.12□□□□□ -0.63
HCFC1-203ENST00000444191 ISM1B1AKI9 464 aa11.12□□□□□ -0.63
HCFC1-203ENST00000444191 PRAMEF4O60810 478 aa11.12□□□□□ -0.63
HCFC1-203ENST00000444191 IGLV3-27P01718 113 aa11.12□□□□□ -0.63
HCFC1-203ENST00000444191 F11P03951 625 aa11.12□□□□□ -0.63
HCFC1-203ENST00000444191 TALDO1P37837 337 aa11.12□□□□□ -0.63
HCFC1-203ENST00000444191 KCNJ10P78508 379 aa11.12□□□□□ -0.63
HCFC1-203ENST00000444191 LASP1Q14847 261 aaKnown RBP11.12□□□□□ -0.63
HCFC1-203ENST00000444191 GRIN2CQ14957 1233 aa11.12□□□□□ -0.63
HCFC1-203ENST00000444191 ZNF385BQ569K4 471 aa11.12□□□□□ -0.63
HCFC1-203ENST00000444191 PRAMEF9Q5VWM5 478 aa11.12□□□□□ -0.63
HCFC1-203ENST00000444191 WASH2PQ6VEQ5 465 aa11.12□□□□□ -0.63
HCFC1-203ENST00000444191 ATP6V1C2Q8NEY4 427 aa11.12□□□□□ -0.63
HCFC1-203ENST00000444191 CD99L2Q8TCZ2 262 aa11.12□□□□□ -0.63
HCFC1-203ENST00000444191 POF1BQ8WVV4 589 aa11.12□□□□□ -0.63
HCFC1-203ENST00000444191 QRSL1Q9H0R6 528 aaKnown RBP11.12□□□□□ -0.63
HCFC1-203ENST00000444191 ZNF334Q9HCZ1 680 aaPredicted RBP11.12□□□□□ -0.63
HCFC1-203ENST00000444191 H3BSH0 61 aa11.12□□□□□ -0.63
HCFC1-203ENST00000444191 SLC30A4O14863 429 aa11.12□□□□□ -0.63
HCFC1-203ENST00000444191 PLD2O14939 933 aa11.12□□□□□ -0.63
HCFC1-203ENST00000444191 GPX2P18283 190 aa11.12□□□□□ -0.63
HCFC1-203ENST00000444191 PFN3P60673 137 aa11.12□□□□□ -0.63
HCFC1-203ENST00000444191 TBCEQ15813 527 aaPredicted RBP11.12□□□□□ -0.63
HCFC1-203ENST00000444191 SMU1Q2TAY7 513 aa11.12□□□□□ -0.63
HCFC1-203ENST00000444191 WSCD2Q2TBF2 565 aa11.12□□□□□ -0.63
HCFC1-203ENST00000444191 FAM209AQ5JX71 171 aa11.12□□□□□ -0.63
HCFC1-203ENST00000444191 LRIF1Q5T3J3 769 aa11.12□□□□□ -0.63
HCFC1-203ENST00000444191 MTFR2Q6P444 385 aa11.12□□□□□ -0.63
HCFC1-203ENST00000444191 C17orf64Q86WR6 236 aa11.12□□□□□ -0.63
HCFC1-203ENST00000444191 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.12□□□□□ -0.63
HCFC1-203ENST00000444191 ARSGQ96EG1 525 aa11.12□□□□□ -0.63
HCFC1-203ENST00000444191 TMEM80Q96HE8 168 aa11.12□□□□□ -0.63
HCFC1-203ENST00000444191 TMEM19Q96HH6 336 aa11.12□□□□□ -0.63
HCFC1-203ENST00000444191 FRMD6Q96NE9 622 aa11.12□□□□□ -0.63
HCFC1-203ENST00000444191 SLC22A4Q9H015 551 aa11.12□□□□□ -0.63
HCFC1-203ENST00000444191 HSPE1-MOB4S4R3N1 261 aa11.12□□□□□ -0.63
HCFC1-203ENST00000444191 A0A1W2PQ72 361 aa11.11□□□□□ -0.63
HCFC1-203ENST00000444191 CD8B2A6NJW9 211 aa11.11□□□□□ -0.63
HCFC1-203ENST00000444191 ANHXE9PGG2 379 aa11.11□□□□□ -0.63
HCFC1-203ENST00000444191 AOC2O75106 756 aa11.11□□□□□ -0.63
HCFC1-203ENST00000444191 GPX5O75715 221 aa11.11□□□□□ -0.63
HCFC1-203ENST00000444191 CD8BP10966 210 aa11.11□□□□□ -0.63
HCFC1-203ENST00000444191 CD22P20273 847 aa11.11□□□□□ -0.63
HCFC1-203ENST00000444191 HLA-FP30511 346 aa11.11□□□□□ -0.63
HCFC1-203ENST00000444191 DGKGP49619 791 aa11.11□□□□□ -0.63
HCFC1-203ENST00000444191 B4GALNT1Q00973 533 aa11.11□□□□□ -0.63
HCFC1-203ENST00000444191 SREBF2Q12772 1141 aa11.11□□□□□ -0.63
HCFC1-203ENST00000444191 CST9Q5W186 159 aa11.11□□□□□ -0.63
HCFC1-203ENST00000444191 TUBA3EQ6PEY2 450 aa11.11□□□□□ -0.63
HCFC1-203ENST00000444191 MARCH9Q86YJ5 346 aa11.11□□□□□ -0.63
HCFC1-203ENST00000444191 CRELD1Q96HD1 420 aa11.11□□□□□ -0.63
HCFC1-203ENST00000444191 ZNF607Q96SK3 696 aa11.11□□□□□ -0.63
HCFC1-203ENST00000444191 KLF16Q9BXK1 252 aaPredicted RBP11.11□□□□□ -0.63
HCFC1-203ENST00000444191 SLC6A16Q9GZN6 736 aa11.11□□□□□ -0.63
HCFC1-203ENST00000444191 SPRTNQ9H040 489 aaPredicted RBP11.11□□□□□ -0.63
HCFC1-203ENST00000444191 OR51V1Q9H2C8 321 aa11.11□□□□□ -0.63
HCFC1-203ENST00000444191 HMX1Q9NP08 348 aaPredicted RBP11.11□□□□□ -0.63
HCFC1-203ENST00000444191 H7C0S8 307 aa11.11□□□□□ -0.63
HCFC1-203ENST00000444191 DSCR3O14972 297 aa11.11□□□□□ -0.63
HCFC1-203ENST00000444191 GRM6O15303 877 aa11.11□□□□□ -0.63
HCFC1-203ENST00000444191 MMP20O60882 483 aa11.11□□□□□ -0.63
HCFC1-203ENST00000444191 CBSLP0DN79 551 aa11.11□□□□□ -0.63
HCFC1-203ENST00000444191 IDSP22304 550 aa11.11□□□□□ -0.63
HCFC1-203ENST00000444191 NOS3P29474 1203 aa11.11□□□□□ -0.63
HCFC1-203ENST00000444191 CBSP35520 551 aa11.11□□□□□ -0.63
HCFC1-203ENST00000444191 HTR2BP41595 481 aa11.11□□□□□ -0.63
HCFC1-203ENST00000444191 SP3Q02447 781 aa11.11□□□□□ -0.63
HCFC1-203ENST00000444191 COX10Q12887 443 aa11.11□□□□□ -0.63
HCFC1-203ENST00000444191 ZNF791Q3KP31 576 aaPredicted RBP11.11□□□□□ -0.63
HCFC1-203ENST00000444191 FNDC3BQ53EP0 1204 aaKnown RBP11.11□□□□□ -0.63
HCFC1-203ENST00000444191 SPIN4Q56A73 249 aa11.11□□□□□ -0.63
HCFC1-203ENST00000444191 LY6G5CQ5SRR4 150 aa11.11□□□□□ -0.63
HCFC1-203ENST00000444191 PLAG1Q6DJT9 500 aa11.11□□□□□ -0.63
HCFC1-203ENST00000444191 REEP3Q6NUK4 255 aa11.11□□□□□ -0.63
HCFC1-203ENST00000444191 VN1R5Q7Z5H4 357 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms