RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 C1QTNF3-AMACRE9PGA6 284 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 CTAGE5O15320 804 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 BCAS1O75363 584 aaPredicted RBP4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 PRKRAO75569 313 aaKnown RBP4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 SERPINI2O75830 405 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 TM7SF2O76062 418 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 MT-ND2P03891 347 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 GSTA2P09210 222 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 ANXA8P13928 327 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 HOXB2P14652 356 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 ACKR3P25106 362 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 TNNT2P45379 298 aaPredicted RBP4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 EEF1A1P68104 462 aaKnown RBP4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 RPL24P83731 157 aaKnown RBP4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 RELQ04864 619 aaPredicted RBP4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 Q0VFX4 171 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 TRAF3Q13114 568 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 EFTUD2Q15029 972 aaKnown RBP eCLIP4.74□□□□□ -1.651e-7■■■□□ 19.2
TM9SF3-202ENST00000443638 MANEAQ5SRI9 462 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 ATF7IP2Q5U623 682 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 ANXA8L1Q5VT79 327 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 EEF1A1P5Q5VTE0 462 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 TAF3Q5VWG9 929 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 CDC42EP5Q6NZY7 148 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 FAM171BQ6P995 826 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 C17orf107Q6ZR85 190 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 GOLGA7Q7Z5G4 137 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 ZNF554Q86TJ5 538 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 FAM228AQ86W67 206 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 PLD3Q8IV08 490 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 CDK20Q8IZL9 346 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 EID3Q8N140 333 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 CLIP4Q8N3C7 705 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 ARFGAP1Q8N6T3 406 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 NIPA2Q8N8Q9 360 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 ANKFN1Q8N957 763 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 ZNF114Q8NC26 417 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 RAB3IL1Q8TBN0 382 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 RAET1EQ8TD07 263 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 SMG7Q92540 1137 aaKnown RBP4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 COQ2Q96H96 371 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 C4orf45Q96LM5 186 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 INPP4AQ96PE3 977 aaPredicted RBP4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 SHARPINQ9H0F6 387 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 EVA1AQ9H8M9 152 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 ETNK2Q9NVF9 386 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 TRNAU1APQ9NX07 287 aaKnown RBP4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 SMARCAL1Q9NZC9 954 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 RNF14Q9UBS8 474 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 KLHDC2Q9Y2U9 406 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 OR10H1Q9Y4A9 318 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 INSL6Q9Y581 213 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 OR1A2Q9Y585 309 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 SLCO1B1Q9Y6L6 691 aa4.74□□□□□ -1.65
TM9SF3-202ENST00000443638 MROH5Q6ZUA9 1318 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 FAM240BA0A1B0GVZ2 78 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 RPS10-NUDT3A0A1W2PQS6 291 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 SH3PXD2BA1X283 911 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 NCF1BA6NI72 391 aaPredicted RBP4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 NCF1CA8MVU1 366 aaPredicted RBP4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 PROB1E7EW31 1015 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 P2RX6O15547 441 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 ZNF208O43345 1280 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 SLC28A2O43868 658 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 SLITRK3O94933 977 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 BAG4O95429 457 aaKnown RBP4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 ATP1B1P05026 303 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 ZNF44P15621 663 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 GPX3P22352 226 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 UQCRC2P22695 453 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 GNL1P36915 607 aaPredicted RBP4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 NPY2RP49146 381 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 CEBPDP49716 269 aaPredicted RBP4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 GAS1P54826 345 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 NAPAP54920 295 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 OR1D5P58170 312 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 LGALS3BPQ08380 585 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 SRSF5Q13243 272 aaKnown RBP4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 ITGA9Q13797 1035 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 NFATC4Q14934 902 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 ARHGAP19Q14CB8 494 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 CALCRLQ16602 461 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 EXOC3L2Q2M3D2 409 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 Q4G0T1 1027 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 ACSF3Q4G176 576 aaPredicted RBP4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 OR4C11Q6IEV9 310 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 CLEC2AQ6UVW9 174 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 TMEM64Q6YI46 380 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 PTF1AQ7RTS3 328 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 C17orf64Q86WR6 236 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 CDR2LQ86X02 465 aaPredicted RBP4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 PSTKQ8IV42 348 aaKnown RBP4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 ZNF683Q8IZ20 524 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 MUC20Q8N307 709 aaPredicted RBP4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 TMEM199Q8N511 208 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 SMRP1Q8NCR6 262 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 PNPT1Q8TCS8 783 aaKnown RBP4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 MIPOL1Q8TD10 442 aa4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 PRICKLE1Q96MT3 831 aaPredicted RBP4.73□□□□□ -1.65
TM9SF3-202ENST00000443638 VSTM2LQ96N03 204 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms