RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 PWWP2AQ96N64 755 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 FAM173AQ9BQD7 235 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 PLAC1Q9HBJ0 212 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 SACM1LQ9NTJ5 587 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 NMRK1Q9NWW6 199 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 LYARQ9NX58 379 aaKnown RBP7.24□□□□□ -1.25
CD44-211ENST00000442151 SLC17A6Q9P2U8 582 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 MYOTQ9UBF9 498 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 PSAT1Q9Y617 370 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 IKBKGQ9Y6K9 419 aa7.24□□□□□ -1.25
CD44-211ENST00000442151 IQANK1A0A1B0GTG1 560 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 TCRBV9S1A1TA0A576 114 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 C17orf105B2RV13 164 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 SUPT3HB4E1H0 165 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 TAPBPO15533 448 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 CDH16O75309 829 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 SUPT3HO75486 399 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 TPOP07202 933 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 ATP5A1P25705 553 aaKnown RBP7.23□□□□□ -1.25
CD44-211ENST00000442151 SSR2P43308 183 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 EFNA3P52797 238 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 PPIAP62937 165 aaKnown RBP7.23□□□□□ -1.25
CD44-211ENST00000442151 ZNF460Q14592 562 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 SLC10A1Q14973 349 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 SLMAPQ14BN4 828 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 ZKSCAN8Q15776 578 aaPredicted RBP7.23□□□□□ -1.25
CD44-211ENST00000442151 KCTD19Q17RG1 926 aaPredicted RBP7.23□□□□□ -1.25
CD44-211ENST00000442151 MPEG1Q2M385 716 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 DEPDC1Q5TB30 811 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 LGSNQ5TDP6 509 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 OR4C11Q6IEV9 310 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 GRHL2Q6ISB3 625 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 CYP20A1Q6UW02 462 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 IL20RBQ6UXL0 311 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 CAPN12Q6ZSI9 719 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 SLC29A4Q7RTT9 530 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 CCDC25Q86WR0 208 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 DOLPP1Q86YN1 238 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 LAS2Q8IYD9 372 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 TAGAPQ8N103 731 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 KIF2BQ8N4N8 673 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 ACOT4Q8N9L9 421 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 APCDD1LQ8NCL9 501 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 AGAP11Q8TF27 550 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 C14orf79Q96F83 325 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 NPAS2Q99743 824 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 MCMBPQ9BTE3 642 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 SPNS1Q9H2V7 528 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 KCNF1Q9H3M0 494 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 IL1RL2Q9HB29 575 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 KCNJ16Q9NPI9 418 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 PRDM7Q9NQW5 492 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 CNIH4Q9P003 139 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 ZNF490Q9ULM2 529 aaPredicted RBP7.23□□□□□ -1.25
CD44-211ENST00000442151 PPT2Q9UMR5 302 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 NFU1Q9UMS0 254 aa7.23□□□□□ -1.25
CD44-211ENST00000442151 USP9YO00507 2555 aaPredicted RBP7.23□□□□□ -1.25
CD44-211ENST00000442151 OR6C76A6NM76 312 aa7.22□□□□□ -1.25
CD44-211ENST00000442151 FIGNL2A6NMB9 653 aa7.22□□□□□ -1.25
CD44-211ENST00000442151 CYR61O00622 381 aa7.22□□□□□ -1.25
CD44-211ENST00000442151 PHGDHO43175 533 aaKnown RBP7.22□□□□□ -1.25
CD44-211ENST00000442151 CDC40O60508 579 aaKnown RBP eCLIP7.22□□□□□ -1.25
CD44-211ENST00000442151 SCELO95171 688 aa7.22□□□□□ -1.25
CD44-211ENST00000442151 WISP3O95389 354 aaPredicted RBP7.22□□□□□ -1.25
CD44-211ENST00000442151 B3GALT4O96024 378 aa7.22□□□□□ -1.25
CD44-211ENST00000442151 RBP1P09455 135 aa7.22□□□□□ -1.25
CD44-211ENST00000442151 GFAPP14136 432 aa7.22□□□□□ -1.25
CD44-211ENST00000442151 HIST1H1TP22492 207 aaPredicted RBP7.22□□□□□ -1.25
CD44-211ENST00000442151 SERPINB3P29508 390 aa7.22□□□□□ -1.25
CD44-211ENST00000442151 HNRNPH1P31943 449 aaKnown RBP7.22□□□□□ -1.25
CD44-211ENST00000442151 GALNSP34059 522 aa7.22□□□□□ -1.25
CD44-211ENST00000442151 SERPINB9P50453 376 aa7.22□□□□□ -1.25
CD44-211ENST00000442151 GPR143P51810 404 aa7.22□□□□□ -1.25
CD44-211ENST00000442151 ETF1P62495 437 aaKnown RBP7.22□□□□□ -1.25
CD44-211ENST00000442151 PLIN5Q00G26 463 aa7.22□□□□□ -1.25
CD44-211ENST00000442151 SLAMF1Q13291 335 aa7.22□□□□□ -1.25
CD44-211ENST00000442151 FASTKD3Q14CZ7 662 aaKnown RBP7.22□□□□□ -1.25
CD44-211ENST00000442151 PIGGQ5H8A4 983 aa7.22□□□□□ -1.25
CD44-211ENST00000442151 TBCELQ5QJ74 424 aa7.22□□□□□ -1.25
CD44-211ENST00000442151 KHDRBS2Q5VWX1 349 aaKnown RBP7.22□□□□□ -1.25
CD44-211ENST00000442151 PAGE2Q7Z2X7 111 aa7.22□□□□□ -1.25
CD44-211ENST00000442151 ISCA2Q86U28 154 aa7.22□□□□□ -1.25
CD44-211ENST00000442151 GPR180Q86V85 440 aa7.22□□□□□ -1.25
CD44-211ENST00000442151 KRTAP19-1Q8IUB9 90 aa7.22□□□□□ -1.25
CD44-211ENST00000442151 ZCCHC7Q8N3Z6 543 aaKnown RBP7.22□□□□□ -1.25
CD44-211ENST00000442151 CPSF7Q8N684 471 aaKnown RBP7.22□□□□□ -1.25
CD44-211ENST00000442151 FAM47BQ8NA70 645 aa7.22□□□□□ -1.25
CD44-211ENST00000442151 PSD4Q8NDX1 1056 aa7.22□□□□□ -1.25
CD44-211ENST00000442151 NUBPLQ8TB37 319 aa7.22□□□□□ -1.25
CD44-211ENST00000442151 FBF1Q8TES7 1133 aa7.22□□□□□ -1.25
CD44-211ENST00000442151 ZNF473Q8WTR7 871 aaKnown RBP7.22□□□□□ -1.25
CD44-211ENST00000442151 UBTD2Q8WUN7 234 aa7.22□□□□□ -1.25
CD44-211ENST00000442151 ATP6V1E2Q96A05 226 aa7.22□□□□□ -1.25
CD44-211ENST00000442151 SARAFQ96BY9 339 aa7.22□□□□□ -1.25
CD44-211ENST00000442151 SDCCAG3Q96C92 435 aa7.22□□□□□ -1.25
CD44-211ENST00000442151 F2RL3Q96RI0 385 aa7.22□□□□□ -1.25
CD44-211ENST00000442151 SERPINI1Q99574 410 aa7.22□□□□□ -1.25
CD44-211ENST00000442151 MS4A8Q9BY19 250 aa7.22□□□□□ -1.25
CD44-211ENST00000442151 HES7Q9BYE0 225 aa7.22□□□□□ -1.25
CD44-211ENST00000442151 RPF2Q9H7B2 306 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms