RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 NCF4Q15080 339 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 GRK1Q15835 563 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 KYAT1Q16773 422 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 NOTUMQ6P988 496 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 USP45Q70EL2 814 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 PTOV1Q86YD1 416 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 MARCH9Q86YJ5 346 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 OR11H7Q8NGC8 314 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 GPR150Q8NGU9 434 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 KCTD7Q96MP8 289 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 BRD9Q9H8M2 597 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 NMUR1Q9HB89 426 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 TRPM5Q9NZQ8 1165 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 PLEKHB1Q9UF11 243 aaPredicted RBP7.2□□□□□ -1.26
HDAC9-214ENST00000441542 HACL1Q9UJ83 578 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 PADI2Q9Y2J8 665 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 GPR52Q9Y2T5 361 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 A0A0D9SEW6 157 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 GABRR3A8MPY1 467 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 M0R233 179 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 DVL2O14641 736 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 CHP2O43745 196 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 MRPS14O60783 128 aaKnown RBP7.2□□□□□ -1.26
HDAC9-214ENST00000441542 RAMP2O60895 175 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 ATG13O75143 517 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 GASTP01350 101 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 STOMP27105 288 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 SOX18P35713 384 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 MAGEA2P43356 314 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 CCR6P51684 374 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 TSPAN5P62079 268 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 CASP12Q6UXS9 341 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 LINGO4Q6UY18 593 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 PLPPR4Q7Z2D5 763 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 LAPTM4BQ86VI4 370 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 CALHM3Q86XJ0 350 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 STPG2Q8N412 459 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 MS4A15Q8N5U1 240 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 OR8K3Q8NH51 312 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 NFKBIDQ8NI38 313 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 ARRDC2Q8TBH0 407 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 LKAAEAR1Q8TD35 194 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 DNAJB3Q8WWF6 145 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 TM9SF4Q92544 642 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 IGSF8Q969P0 613 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 INTS12Q96CB8 462 aaKnown RBP7.2□□□□□ -1.26
HDAC9-214ENST00000441542 C11orf24Q96F05 449 aaPredicted RBP7.2□□□□□ -1.26
HDAC9-214ENST00000441542 OTUB1Q96FW1 271 aaPredicted RBP7.2□□□□□ -1.26
HDAC9-214ENST00000441542 HTATIP2Q9BUP3 242 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 CD244Q9BZW8 370 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 GABARAPL1Q9H0R8 117 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 NDUFAF4Q9P032 175 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 FBXL2Q9UKC9 423 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 HCN2Q9UL51 889 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 EDARQ9UNE0 448 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 DIMT1Q9UNQ2 313 aaKnown RBP7.2□□□□□ -1.26
HDAC9-214ENST00000441542 LINC00862A6NCI5 91 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 SLC28A1O00337 649 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 GADD45GO95257 159 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 CBX7O95931 251 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 CD3GP09693 182 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 CD79BP40259 229 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 ADCYAP1R1P41586 468 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 GSTM5P46439 218 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 GPR15P49685 360 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 ETV1P50549 477 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 GZMMP51124 257 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 CLCNKAP51800 687 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 FKBP1AP62942 108 aaKnown RBP7.2□□□□□ -1.26
HDAC9-214ENST00000441542 GPR176Q14439 515 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 SHEQ5VZ18 495 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 KIAA1841Q6NSI8 718 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 LRFN4Q6PJG9 635 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 ATRAIDQ6UW56 229 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 WASH2PQ6VEQ5 465 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 ZNF852Q6ZMS4 543 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 RTL4Q6ZR62 310 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 HDDC2Q7Z4H3 204 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 KIAA0907Q7Z7F0 614 aaPredicted RBP7.2□□□□□ -1.26
HDAC9-214ENST00000441542 MDGA1Q8NFP4 955 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 KLHL6Q8WZ60 621 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 TEPSINQ96N21 525 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 RTP3Q9BQQ7 232 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 NTMT1Q9BV86 223 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 KATNB1Q9BVA0 655 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 POLR1EQ9GZS1 481 aaKnown RBP7.2□□□□□ -1.26
HDAC9-214ENST00000441542 LIN7BQ9HAP6 207 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 NMRK2Q9NPI5 230 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 ARL15Q9NXU5 204 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 OR6C2Q9NZP2 312 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 GMEB2Q9UKD1 530 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 ELF5Q9UKW6 265 aaPredicted RBP7.2□□□□□ -1.26
HDAC9-214ENST00000441542 COPS3Q9UNS2 423 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 POFUT2Q9Y2G5 429 aa7.2□□□□□ -1.26
HDAC9-214ENST00000441542 MGAMO43451 1857 aa7.19□□□□□ -1.26
HDAC9-214ENST00000441542 SLC30A4O14863 429 aa7.19□□□□□ -1.26
HDAC9-214ENST00000441542 SMAD9O15198 467 aaKnown RBP7.19□□□□□ -1.26
HDAC9-214ENST00000441542 TAPBPO15533 448 aa7.19□□□□□ -1.26
HDAC9-214ENST00000441542 B3GAT3O94766 335 aa7.19□□□□□ -1.26
HDAC9-214ENST00000441542 DDNO94850 711 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms