RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 TRAF3Q13114 568 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 UBAP2LQ14157 1087 aaKnown RBP9.78□□□□□ -0.84
MCF2L-216ENST00000439475 SGO1Q5FBB7 561 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 ZNF766Q5HY98 468 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 CFAP157Q5JU67 520 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 FCRLBQ6BAA4 426 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 GPRIN3Q6ZVF9 776 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 CLNKQ7Z7G1 428 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 BEST3Q8N1M1 668 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 FAM26EQ8N5C1 309 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 TMEM156Q8N614 296 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 TMEM178AQ8NBL3 297 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 TMEM52Q8NDY8 209 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 OR5L2Q8NGL0 311 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 RDH11Q8TC12 318 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 METTL6Q8TCB7 284 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 GRHL3Q8TE85 626 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 MZB1Q8WU39 189 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 TMEM125Q96AQ2 219 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 C19orf60Q96EN9 201 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 C5orf34Q96MH7 638 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.78□□□□□ -0.84
MCF2L-216ENST00000439475 LRFN1Q9P244 771 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 PPIEQ9UNP9 301 aaKnown RBP9.78□□□□□ -0.84
MCF2L-216ENST00000439475 SLC12A4Q9UP95 1085 aa9.78□□□□□ -0.84
MCF2L-216ENST00000439475 FASNP49327 2511 aaKnown RBP9.78□□□□□ -0.84
MCF2L-216ENST00000439475 ESPL1Q14674 2120 aa9.77□□□□□ -0.84
MCF2L-216ENST00000439475 CPAMD8Q8IZJ3 1885 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 TRBV11-1A0A0K0K1C0 115 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 ANKUB1A6NFN9 424 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 C17orf105B2RV13 164 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 PROM1O43490 865 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 ULK1O75385 1050 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 GPR75O95800 540 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 ENO1P06733 434 aaKnown RBP9.77□□□□□ -0.85
MCF2L-216ENST00000439475 KLK1P06870 262 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 NUDT17P0C025 328 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 EDN3P14138 238 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 KRT4P19013 534 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 TSPAN8P19075 237 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 CD96P40200 585 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 STT3AP46977 705 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 MLF1P58340 268 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 ASPHQ12797 758 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 TUBA3CQ13748 450 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 OR1C1Q15619 314 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 PRR30Q53SZ7 412 aaPredicted RBP9.77□□□□□ -0.85
MCF2L-216ENST00000439475 CCNYL2Q5T2Q4 361 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 MRM1Q6IN84 353 aaKnown RBP9.77□□□□□ -0.85
MCF2L-216ENST00000439475 SLC25A25Q6KCM7 469 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 TUBA3EQ6PEY2 450 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 ZYG11AQ6WRX3 759 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 HSDL2Q6YN16 418 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 METTL4Q8N3J2 472 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 CCNYL1Q8N7R7 359 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 GBP7Q8N8V2 638 aaPredicted RBP9.77□□□□□ -0.85
MCF2L-216ENST00000439475 ST6GALNAC3Q8NDV1 305 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 PRR7Q8TB68 274 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 EPS8L3Q8TE67 593 aaKnown RBP9.77□□□□□ -0.85
MCF2L-216ENST00000439475 NCLNQ969V3 563 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 L3HYPDHQ96EM0 354 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 TMEM237Q96Q45 408 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 ZNF382Q96SR6 550 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 SORBS1Q9BX66 1292 aaKnown RBP9.77□□□□□ -0.85
MCF2L-216ENST00000439475 RYDENQ9NUL5 291 aaKnown RBP9.77□□□□□ -0.85
MCF2L-216ENST00000439475 OLAHQ9NV23 265 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 VPS29Q9UBQ0 182 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 COPS7AQ9UBW8 275 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 PSME2Q9UL46 239 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 YARS2Q9Y2Z4 477 aaKnown RBP9.77□□□□□ -0.85
MCF2L-216ENST00000439475 ASB4Q9Y574 426 aa9.77□□□□□ -0.85
MCF2L-216ENST00000439475 TLN1Q9Y490 2541 aaKnown RBP9.76□□□□□ -0.85
MCF2L-216ENST00000439475 ATMQ13315 3056 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 A0A0A6YYD5 115 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 PPP6CO00743 305 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 OR10H2O60403 315 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 PLIN3O60664 434 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 CRCPO75575 148 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 CBX6O95503 412 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 ETHE1O95571 254 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 PDYNP01213 254 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 NR2F6P10588 404 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 CPA3P15088 417 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 ALOX15P16050 662 aaPredicted RBP9.76□□□□□ -0.85
MCF2L-216ENST00000439475 PIK3R1P27986 724 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 DEKP35659 375 aaKnown RBP9.76□□□□□ -0.85
MCF2L-216ENST00000439475 HLCSP50747 726 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 MAPK12P53778 367 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 HNRNPH2P55795 449 aaKnown RBP9.76□□□□□ -0.85
MCF2L-216ENST00000439475 DNAJB13P59910 316 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 PLIN5Q00G26 463 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 FOLH1Q04609 750 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 SLC18A2Q05940 514 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 CSTF3Q12996 717 aaKnown RBP9.76□□□□□ -0.85
MCF2L-216ENST00000439475 LCP2Q13094 533 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 NR6A1Q15406 480 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 MAPKAPK3Q16644 382 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 EIF2S3LQ2VIR3 472 aaKnown RBP9.76□□□□□ -0.85
MCF2L-216ENST00000439475 C6orf163Q5TEZ5 329 aa9.76□□□□□ -0.85
MCF2L-216ENST00000439475 C18orf63Q68DL7 685 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms