RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 DOC2BQ14184 412 aa15.63■□□□□ 0.09
CLCNKA-203ENST00000439316 TSTQ16762 297 aaKnown RBP15.63■□□□□ 0.09
CLCNKA-203ENST00000439316 TMEM215Q68D42 235 aa15.63■□□□□ 0.09
CLCNKA-203ENST00000439316 DESI1Q6ICB0 168 aa15.63■□□□□ 0.09
CLCNKA-203ENST00000439316 UNC5DQ6UXZ4 953 aa15.63■□□□□ 0.09
CLCNKA-203ENST00000439316 SLC44A2Q8IWA5 706 aaPredicted RBP15.63■□□□□ 0.09
CLCNKA-203ENST00000439316 NLGN4XQ8N0W4 816 aa15.63■□□□□ 0.09
CLCNKA-203ENST00000439316 IRF7Q92985 503 aa15.63■□□□□ 0.09
CLCNKA-203ENST00000439316 MRPL38Q96DV4 380 aaKnown RBP15.63■□□□□ 0.09
CLCNKA-203ENST00000439316 LRRC3BQ96PB8 259 aa15.63■□□□□ 0.09
CLCNKA-203ENST00000439316 NMNAT1Q9HAN9 279 aaPredicted RBP15.63■□□□□ 0.09
CLCNKA-203ENST00000439316 CLN6Q9NWW5 311 aa15.63■□□□□ 0.09
CLCNKA-203ENST00000439316 PNMA8CA0A1B0GUJ8 204 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 A0A1W2PRB8 838 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 CCRL2O00421 344 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 KMOO15229 486 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 GASTP01350 101 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 IFNW1P05000 195 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 CNR2P34972 360 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 SOAT1P35610 550 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 MMP12P39900 470 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 ALDH9A1P49189 494 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 DSTNP60981 165 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 SSX1Q16384 188 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 LRIT3Q3SXY7 679 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 PLAG1Q6DJT9 500 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 FRMPD2BQ6IN97 320 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 IKBIPQ70UQ0 350 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 LRRC56Q8IYG6 542 aaPredicted RBP15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 ZNF513Q8N8E2 541 aaPredicted RBP15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 APOBEC4Q8WW27 367 aaKnown RBP15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 MRGPRX3Q96LB0 322 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 CTRCQ99895 268 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 SPNS1Q9H2V7 528 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 TBC1D14Q9P2M4 693 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 RAB23Q9ULC3 237 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 CAB39Q9Y376 341 aaPredicted RBP15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 BRWD1Q9NSI6 2320 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 KIF26AQ9ULI4 1882 aaPredicted RBP15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 LOC110117498-PIK3R3F6TDL0 507 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 ARHGAP33O14559 1287 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 PAPLNO95428 1278 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 CASP3P42574 277 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 STARD3Q14849 445 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 MED22Q15528 200 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 BCL7AQ4VC05 210 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 LY6G5CQ5SRR4 150 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 IER5LQ5T953 404 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 HIST2H2AA3Q6FI13 130 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 NXPE4Q6UWF7 544 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 LIPIQ6XZB0 460 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 PTCHD4Q6ZW05 846 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 GDPD3Q7L5L3 318 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 CELF5Q8N6W0 485 aaKnown RBP15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 WDR36Q8NI36 951 aaKnown RBP15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 SLC5A11Q8WWX8 675 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 PIK3R3Q92569 461 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 AP2M1Q96CW1 435 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 CDCA3Q99618 268 aaPredicted RBP15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 SDHCQ99643 169 aaPredicted RBP15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 ROGDIQ9GZN7 287 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 EPHX3Q9H6B9 360 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 SLC25A19Q9HC21 320 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 FZD3Q9NPG1 666 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 SPHK2Q9NRA0 654 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 DKK3Q9UBP4 350 aa15.62■□□□□ 0.09
CLCNKA-203ENST00000439316 A0A075B6Q4 140 aa15.61■□□□□ 0.09
CLCNKA-203ENST00000439316 LINC01565O15544 149 aa15.61■□□□□ 0.09
CLCNKA-203ENST00000439316 DNTTP04053 509 aa15.61■□□□□ 0.09
CLCNKA-203ENST00000439316 KLK1P06870 262 aa15.61■□□□□ 0.09
CLCNKA-203ENST00000439316 IL3P08700 152 aa15.61■□□□□ 0.09
CLCNKA-203ENST00000439316 TYRP14679 529 aa15.61■□□□□ 0.09
CLCNKA-203ENST00000439316 XPAP23025 273 aaPredicted RBP15.61■□□□□ 0.09
CLCNKA-203ENST00000439316 VIPR2P41587 438 aa15.61■□□□□ 0.09
CLCNKA-203ENST00000439316 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.61■□□□□ 0.09
CLCNKA-203ENST00000439316 TSTA3Q13630 321 aaPredicted RBP15.61■□□□□ 0.09
CLCNKA-203ENST00000439316 ZNF805Q5CZA5 627 aa15.61■□□□□ 0.09
CLCNKA-203ENST00000439316 SPANXN2Q5MJ10 180 aa15.61■□□□□ 0.09
CLCNKA-203ENST00000439316 DEPDC1Q5TB30 811 aa15.61■□□□□ 0.09
CLCNKA-203ENST00000439316 CCBE1Q6UXH8 406 aaPredicted RBP15.61■□□□□ 0.09
CLCNKA-203ENST00000439316 KIAA0907Q7Z7F0 614 aaPredicted RBP15.61■□□□□ 0.09
CLCNKA-203ENST00000439316 TDHQ8IZJ6 230 aa15.61■□□□□ 0.09
CLCNKA-203ENST00000439316 ZNF557Q8N988 423 aaPredicted RBP15.61■□□□□ 0.09
CLCNKA-203ENST00000439316 FAM46DQ8NEK8 389 aa15.61■□□□□ 0.09
CLCNKA-203ENST00000439316 RSPRY1Q96DX4 576 aa15.61■□□□□ 0.09
CLCNKA-203ENST00000439316 OPALINQ96PE5 141 aa15.61■□□□□ 0.09
CLCNKA-203ENST00000439316 TRNT1Q96Q11 434 aaKnown RBP15.61■□□□□ 0.09
CLCNKA-203ENST00000439316 MIR1-1HGQ9H1L0 117 aa15.61■□□□□ 0.09
CLCNKA-203ENST00000439316 RHCGQ9UBD6 479 aa15.61■□□□□ 0.09
CLCNKA-203ENST00000439316 IL36AQ9UHA7 158 aa15.61■□□□□ 0.09
CLCNKA-203ENST00000439316 POU2F3Q9UKI9 436 aa15.61■□□□□ 0.09
CLCNKA-203ENST00000439316 TSC22D4Q9Y3Q8 395 aa15.61■□□□□ 0.09
CLCNKA-203ENST00000439316 DOCK8Q8NF50 2099 aa15.61■□□□□ 0.09
CLCNKA-203ENST00000439316 FFAR1O14842 300 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 ASNA1O43681 348 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 DYRK3O43781 588 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 LILRB5O75023 590 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 GPX5O75715 221 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 ADAP00813 363 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 174.1 ms