RNA–Protein interactions for RNA: ENST00000439286.5

GARNL3-206, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-206ENST00000439286 MDC1Q14676 2089 aaKnown RBP12.55□□□□□ -0.4
GARNL3-206ENST00000439286 OR14I1A6ND48 311 aa12.55□□□□□ -0.4
GARNL3-206ENST00000439286 FAM159BA6NKW6 160 aa12.55□□□□□ -0.4
GARNL3-206ENST00000439286 FIGNL2A6NMB9 653 aa12.55□□□□□ -0.4
GARNL3-206ENST00000439286 FAM90A27PA6NNH2 459 aa12.55□□□□□ -0.4
GARNL3-206ENST00000439286 SYCE1LA8MT33 242 aa12.55□□□□□ -0.4
GARNL3-206ENST00000439286 G3V3Y1 287 aa12.55□□□□□ -0.4
GARNL3-206ENST00000439286 K7EPI3 171 aa12.55□□□□□ -0.4
GARNL3-206ENST00000439286 SH3BGRLO75368 114 aa12.55□□□□□ -0.4
GARNL3-206ENST00000439286 WISP3O95389 354 aaPredicted RBP12.55□□□□□ -0.4
GARNL3-206ENST00000439286 TBX6O95947 436 aaPredicted RBP12.55□□□□□ -0.4
GARNL3-206ENST00000439286 EPB42P16452 691 aa12.55□□□□□ -0.4
GARNL3-206ENST00000439286 POU3F2P20265 443 aaPredicted RBP12.55□□□□□ -0.4
GARNL3-206ENST00000439286 STX2P32856 288 aa12.55□□□□□ -0.4
GARNL3-206ENST00000439286 CASP2P42575 452 aa12.55□□□□□ -0.4
GARNL3-206ENST00000439286 HK2P52789 917 aa12.55□□□□□ -0.4
GARNL3-206ENST00000439286 PHEXP78562 749 aa12.55□□□□□ -0.4
GARNL3-206ENST00000439286 MRPS25P82663 173 aaKnown RBP12.55□□□□□ -0.4
GARNL3-206ENST00000439286 ID2Q02363 134 aa12.55□□□□□ -0.4
GARNL3-206ENST00000439286 CAV1Q03135 178 aa12.55□□□□□ -0.4
GARNL3-206ENST00000439286 TBL3Q12788 808 aaKnown RBP12.55□□□□□ -0.4
GARNL3-206ENST00000439286 SLAMF1Q13291 335 aa12.55□□□□□ -0.4
GARNL3-206ENST00000439286 SLC10A1Q14973 349 aa12.55□□□□□ -0.4
GARNL3-206ENST00000439286 GXYLT1Q4G148 440 aa12.55□□□□□ -0.4
GARNL3-206ENST00000439286 ADNP2Q6IQ32 1131 aa12.55□□□□□ -0.4
GARNL3-206ENST00000439286 ZNF585AQ6P3V2 769 aa12.55□□□□□ -0.4
GARNL3-206ENST00000439286 MYLK4Q86YV6 388 aaPredicted RBP12.55□□□□□ -0.4
GARNL3-206ENST00000439286 FAM109AQ8N4B1 249 aa12.55□□□□□ -0.4
GARNL3-206ENST00000439286 SLC22A8Q8TCC7 542 aa12.55□□□□□ -0.4
GARNL3-206ENST00000439286 ZNF473Q8WTR7 871 aaKnown RBP12.55□□□□□ -0.4
GARNL3-206ENST00000439286 UBXN10Q96LJ8 280 aa12.55□□□□□ -0.4
GARNL3-206ENST00000439286 SMC6Q96SB8 1091 aa12.55□□□□□ -0.4
GARNL3-206ENST00000439286 TTTY12Q9BZ98 90 aa12.55□□□□□ -0.4
GARNL3-206ENST00000439286 EXO5Q9H790 373 aa12.55□□□□□ -0.4
GARNL3-206ENST00000439286 SLC24A3Q9HC58 644 aa12.55□□□□□ -0.4
GARNL3-206ENST00000439286 DEPPQ9NTK1 212 aa12.55□□□□□ -0.4
GARNL3-206ENST00000439286 RNF6Q9Y252 685 aa12.55□□□□□ -0.4
GARNL3-206ENST00000439286 CNTRLQ7Z7A1 2325 aa12.55□□□□□ -0.4
GARNL3-206ENST00000439286 IQANK1A0A1B0GTG1 560 aa12.54□□□□□ -0.4
GARNL3-206ENST00000439286 ATP6AP2A0A1C7CYW4 349 aa12.54□□□□□ -0.4
GARNL3-206ENST00000439286 TMEM200CA6NKL6 621 aa12.54□□□□□ -0.4
GARNL3-206ENST00000439286 SAP18O00422 153 aaKnown RBP12.54□□□□□ -0.4
GARNL3-206ENST00000439286 RTCAO00442 366 aaKnown RBP12.54□□□□□ -0.4
GARNL3-206ENST00000439286 PRAMEF4O60810 478 aa12.54□□□□□ -0.4
GARNL3-206ENST00000439286 ATP6AP2O75787 350 aa12.54□□□□□ -0.4
GARNL3-206ENST00000439286 LTA4HP09960 611 aaKnown RBP12.54□□□□□ -0.4
GARNL3-206ENST00000439286 CD22P20273 847 aa12.54□□□□□ -0.4
GARNL3-206ENST00000439286 MAN2A2P49641 1150 aa12.54□□□□□ -0.4
GARNL3-206ENST00000439286 PLTPP55058 493 aa12.54□□□□□ -0.4
GARNL3-206ENST00000439286 PLIN5Q00G26 463 aa12.54□□□□□ -0.4
GARNL3-206ENST00000439286 DDX39BQ13838 428 aaKnown RBP12.54□□□□□ -0.4
GARNL3-206ENST00000439286 ZKSCAN8Q15776 578 aaPredicted RBP12.54□□□□□ -0.4
GARNL3-206ENST00000439286 MPEG1Q2M385 716 aa12.54□□□□□ -0.4
GARNL3-206ENST00000439286 PRAMEF9Q5VWM5 478 aa12.54□□□□□ -0.4
GARNL3-206ENST00000439286 KHDRBS2Q5VWX1 349 aaKnown RBP12.54□□□□□ -0.4
GARNL3-206ENST00000439286 OR4C11Q6IEV9 310 aa12.54□□□□□ -0.4
GARNL3-206ENST00000439286 ZNF793Q6ZN11 406 aa12.54□□□□□ -0.4
GARNL3-206ENST00000439286 CDH24Q86UP0 819 aa12.54□□□□□ -0.4
GARNL3-206ENST00000439286 CCDC25Q86WR0 208 aa12.54□□□□□ -0.4
GARNL3-206ENST00000439286 LAS2Q8IYD9 372 aa12.54□□□□□ -0.4
GARNL3-206ENST00000439286 CLYBLQ8N0X4 340 aa12.54□□□□□ -0.4
GARNL3-206ENST00000439286 SPATA4Q8NEY3 305 aa12.54□□□□□ -0.4
GARNL3-206ENST00000439286 OR5M9Q8NGP3 310 aa12.54□□□□□ -0.4
GARNL3-206ENST00000439286 TANKQ92844 425 aa12.54□□□□□ -0.4
GARNL3-206ENST00000439286 RGMAQ96B86 450 aa12.54□□□□□ -0.4
GARNL3-206ENST00000439286 REPS1Q96D71 796 aa12.54□□□□□ -0.4
GARNL3-206ENST00000439286 SENP5Q96HI0 755 aaPredicted RBP12.54□□□□□ -0.4
GARNL3-206ENST00000439286 SCYL1Q96KG9 808 aa12.54□□□□□ -0.4
GARNL3-206ENST00000439286 RAB17Q9H0T7 212 aa12.54□□□□□ -0.4
GARNL3-206ENST00000439286 RPF2Q9H7B2 306 aaKnown RBP12.54□□□□□ -0.4
GARNL3-206ENST00000439286 ALKBH4Q9NXW9 302 aa12.54□□□□□ -0.4
GARNL3-206ENST00000439286 PHF11Q9UIL8 331 aa12.54□□□□□ -0.4
GARNL3-206ENST00000439286 ACAD8Q9UKU7 415 aa12.54□□□□□ -0.4
GARNL3-206ENST00000439286 ACOT9Q9Y305 439 aa12.54□□□□□ -0.4
GARNL3-206ENST00000439286 CACNA1DQ01668 2161 aa12.54□□□□□ -0.4
GARNL3-206ENST00000439286 PINLYPA6NC86 204 aa12.53□□□□□ -0.4
GARNL3-206ENST00000439286 FAM47E-STBD1D6RA91 191 aa12.53□□□□□ -0.4
GARNL3-206ENST00000439286 KERAO60938 352 aa12.53□□□□□ -0.4
GARNL3-206ENST00000439286 PTX3P26022 381 aaPredicted RBP12.53□□□□□ -0.4
GARNL3-206ENST00000439286 ACVR2AP27037 513 aa12.53□□□□□ -0.4
GARNL3-206ENST00000439286 BUD31P41223 144 aaPredicted RBP12.53□□□□□ -0.4
GARNL3-206ENST00000439286 STT3AP46977 705 aa12.53□□□□□ -0.4
GARNL3-206ENST00000439286 NUP107P57740 925 aa12.53□□□□□ -0.4
GARNL3-206ENST00000439286 ASPHQ12797 758 aa12.53□□□□□ -0.4
GARNL3-206ENST00000439286 FAM83EQ2M2I3 478 aa12.53□□□□□ -0.4
GARNL3-206ENST00000439286 KBTBD12Q3ZCT8 623 aa12.53□□□□□ -0.4
GARNL3-206ENST00000439286 PIGGQ5H8A4 983 aa12.53□□□□□ -0.4
GARNL3-206ENST00000439286 WLSQ5T9L3 541 aa12.53□□□□□ -0.4
GARNL3-206ENST00000439286 DEPDC1Q5TB30 811 aa12.53□□□□□ -0.4
GARNL3-206ENST00000439286 CES4AQ5XG92 561 aa12.53□□□□□ -0.4
GARNL3-206ENST00000439286 SLC22A10Q63ZE4 541 aa12.53□□□□□ -0.4
GARNL3-206ENST00000439286 GRHL2Q6ISB3 625 aa12.53□□□□□ -0.4
GARNL3-206ENST00000439286 CCDC91Q7Z6B0 441 aa12.53□□□□□ -0.4
GARNL3-206ENST00000439286 UBE3DQ7Z6J8 389 aa12.53□□□□□ -0.4
GARNL3-206ENST00000439286 ISCA2Q86U28 154 aa12.53□□□□□ -0.4
GARNL3-206ENST00000439286 GPR180Q86V85 440 aa12.53□□□□□ -0.4
GARNL3-206ENST00000439286 CCDC71Q8IV32 467 aaPredicted RBP12.53□□□□□ -0.4
GARNL3-206ENST00000439286 OR4N5Q8IXE1 308 aa12.53□□□□□ -0.4
GARNL3-206ENST00000439286 DND1Q8IYX4 353 aaKnown RBP12.53□□□□□ -0.4
GARNL3-206ENST00000439286 MARVELD2Q8N4S9 558 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms