RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 ZNF761Q86XN6 746 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 FBXO15Q8NCQ5 510 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 OR5P2Q8WZ92 322 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 ART5Q96L15 291 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 MUS81Q96NY9 551 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 GTPBP2Q9BX10 602 aaKnown RBP11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 LMAN1LQ9HAT1 526 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 IL21RQ9HBE5 538 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 HCN4Q9Y3Q4 1203 aa11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 DNMT3AQ9Y6K1 912 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC9-202ENST00000438773 OR5K4A6NMS3 321 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 PLOD3O60568 738 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 SNX4O95219 450 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 ITPKBP27987 946 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 PSMB5P28074 263 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 RPS26P62854 115 aaKnown RBP11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 RAB39AQ14964 217 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 Q6ZSR6 202 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 ASPGQ86U10 573 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 KLHDC8AQ8IYD2 350 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 ZBTB8BQ8NAP8 495 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 TP53INP1Q96A56 240 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 ECHDC3Q96DC8 303 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 RPF2Q9H7B2 306 aaKnown RBP11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 RPRD1BQ9NQG5 326 aaKnown RBP11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 DMRT3Q9NQL9 472 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 TMEM45AQ9NWC5 275 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 CD300AQ9UGN4 299 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 PCDHGA4Q9Y5G9 962 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 A8MU76 341 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 ARNTLO00327 626 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 PSIP1O75475 530 aaKnown RBP11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 ALPPP05187 535 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 MAGEA8P43361 318 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 MC1RQ01726 317 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 GPR68Q15743 365 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 ATP6AP1Q15904 470 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 CDH24Q86UP0 819 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 GKN2Q86XP6 184 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 PLA2G15Q8NCC3 412 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 NPLQ9BXD5 320 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 HDAC8Q9BY41 377 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 TRBV5-4A0A0C4DH59 114 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 CPED1A4D0V7 1026 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 GPR89AB7ZAQ6 455 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 RGS10O43665 173 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 B4GALT2O60909 372 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 CTSLP07711 333 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 TSPAN19P0C672 248 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 GPR89BP0CG08 455 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 SAGP10523 405 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 UQCRC2P22695 453 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 GTF2E2P29084 291 aaKnown RBP11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 RPL4P36578 427 aaKnown RBP11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 TNFRSF4P43489 277 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 ARRB1P49407 418 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 VSX2P58304 361 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 TARDBPQ13148 414 aaKnown RBP eCLIP11.05□□□□□ -0.642e-6■■■■□ 25.6
TRAPPC9-202ENST00000438773 ARHGAP19Q14CB8 494 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 ZBED5Q49AG3 693 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 LCTLQ6UWM7 567 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 AVL9Q8NBF6 648 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 GOLM1Q8NBJ4 401 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 ZNF740Q8NDX6 193 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 GTF2H4Q92759 462 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 UBE2ZQ9H832 354 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 TMEM27Q9HBJ8 222 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 GPC6Q9Y625 555 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 BRCA2P51587 3418 aa11.05□□□□□ -0.64
TRAPPC9-202ENST00000438773 LINC01565O15544 149 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 TSPAN12O95859 305 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 GGT1P19440 569 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 EIF2DP41214 584 aaKnown RBP11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 MLLT3P42568 568 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 EPHA5P54756 1037 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 VBP1P61758 197 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 MRPS21P82921 87 aaKnown RBP11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 FADDQ13158 208 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 IHHQ14623 411 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 ELOCQ15369 112 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 SNAPC1Q16533 368 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 INAVAQ3KP66 663 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 TMEM236Q5W0B7 351 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 ENPP6Q6UWR7 440 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 KAT2AQ92830 837 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 MAL2Q969L2 176 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 ZNF707Q96C28 371 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 SORBS1Q9BX66 1292 aaKnown RBP11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 BHLHE41Q9C0J9 482 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 POLR2J3Q9H1A7 115 aaKnown RBP11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 SACM1LQ9NTJ5 587 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 CORINQ9Y5Q5 1042 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 KNTC1P50748 2209 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 CABIN1Q9Y6J0 2220 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 A0A0G2JMZ2 1700 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 MATN1P21941 496 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 TIMM50Q3ZCQ8 353 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 P2RY8Q86VZ1 359 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 SLC34A3Q8N130 599 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 CADM2Q8N3J6 435 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms