RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 HORMAD2Q8N7B1 307 aa17.68■□□□□ 0.42
CLK1-205ENST00000434813 RPL3LQ92901 407 aaKnown RBP17.68■□□□□ 0.42
CLK1-205ENST00000434813 LGALS12Q96DT0 336 aa17.68■□□□□ 0.42
CLK1-205ENST00000434813 MRPL38Q96DV4 380 aaKnown RBP17.68■□□□□ 0.42
CLK1-205ENST00000434813 LHX9Q9NQ69 397 aa17.68■□□□□ 0.42
CLK1-205ENST00000434813 OBP2AQ9NY56 170 aa17.68■□□□□ 0.42
CLK1-205ENST00000434813 PMF1-BGLAPU3KQ54 211 aa17.68■□□□□ 0.42
CLK1-205ENST00000434813 PLXND1Q9Y4D7 1925 aa17.68■□□□□ 0.42
CLK1-205ENST00000434813 IGLON5A6NGN9 336 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 C5orf58C9J3I9 102 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 TOR1BO14657 336 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 PSMB5P28074 263 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 C21orf33P30042 268 aaPredicted RBP17.67■□□□□ 0.42
CLK1-205ENST00000434813 DRD3P35462 400 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 SLC19A1P41440 591 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 MANFP55145 182 aaKnown RBP17.67■□□□□ 0.42
CLK1-205ENST00000434813 PCBP4P57723 403 aaKnown RBP17.67■□□□□ 0.42
CLK1-205ENST00000434813 MFSD4AQ8N468 514 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 OR6Q1Q8NGQ2 317 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 UTP15Q8TED0 518 aaKnown RBP17.67■□□□□ 0.42
CLK1-205ENST00000434813 SLC38A5Q8WUX1 472 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 SNRNP27Q8WVK2 155 aaKnown RBP17.67■□□□□ 0.42
CLK1-205ENST00000434813 MAPKAP1Q9BPZ7 522 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 ZDHHC4Q9NPG8 344 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 HCN2Q9UL51 889 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 C5orf42Q9H799 3197 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 FEZF1A0PJY2 475 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 EFCAB9A8MZ26 197 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 GPR89AB7ZAQ6 455 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 KMOO15229 486 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 NDUFS4O43181 175 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 BCHEP06276 602 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 HNRNPCP07910 306 aaKnown RBP eCLIP17.67■□□□□ 0.42
CLK1-205ENST00000434813 GPR89BP0CG08 455 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 BMP8BP34820 402 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 LIPAP38571 399 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 ALDH9A1P49189 494 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 TAS2R38P59533 333 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 RPS26P62854 115 aaKnown RBP17.67■□□□□ 0.42
CLK1-205ENST00000434813 ITGADQ13349 1161 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 PUM1Q14671 1186 aaKnown RBP eCLIP17.67■□□□□ 0.42
CLK1-205ENST00000434813 GANABQ14697 944 aaKnown RBP17.67■□□□□ 0.42
CLK1-205ENST00000434813 DUSP7Q16829 419 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 RPS26P11Q5JNZ5 115 aaPredicted RBP17.67■□□□□ 0.42
CLK1-205ENST00000434813 AGBL4Q5VU57 503 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 BTLAQ7Z6A9 289 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 ERLEC1Q96DZ1 483 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 TMEM19Q96HH6 336 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 ALPK1Q96QP1 1244 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 TEX101Q9BY14 249 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 ALOXE3Q9BYJ1 711 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 SLIRPQ9GZT3 109 aaKnown RBP17.67■□□□□ 0.42
CLK1-205ENST00000434813 ABCG4Q9H172 646 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 ANKHQ9HCJ1 492 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 SIRT3Q9NTG7 399 aaPredicted RBP17.67■□□□□ 0.42
CLK1-205ENST00000434813 IMPAD1Q9NX62 359 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 SELENONQ9NZV5 590 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 OSGIN1Q9UJX0 560 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 ADAM29Q9UKF5 820 aa17.67■□□□□ 0.42
CLK1-205ENST00000434813 ANTXRLA6NF34 631 aa17.66■□□□□ 0.42
CLK1-205ENST00000434813 H7BY64 318 aa17.66■□□□□ 0.42
CLK1-205ENST00000434813 RFXAPO00287 272 aa17.66■□□□□ 0.42
CLK1-205ENST00000434813 FCARP24071 287 aa17.66■□□□□ 0.42
CLK1-205ENST00000434813 TMEM236Q5W0B7 351 aa17.66■□□□□ 0.42
CLK1-205ENST00000434813 ZNF770Q6IQ21 691 aaPredicted RBP17.66■□□□□ 0.42
CLK1-205ENST00000434813 TNFAIP8L2Q6P589 184 aaPredicted RBP17.66■□□□□ 0.42
CLK1-205ENST00000434813 CHRDL2Q6WN34 429 aa17.66■□□□□ 0.42
CLK1-205ENST00000434813 AQP11Q8NBQ7 271 aa17.66■□□□□ 0.42
CLK1-205ENST00000434813 ST13P5Q8NFI4 369 aaPredicted RBP17.66■□□□□ 0.42
CLK1-205ENST00000434813 PRAP1Q96NZ9 151 aa17.66■□□□□ 0.42
CLK1-205ENST00000434813 DNAAF2Q9NVR5 837 aaKnown RBP17.66■□□□□ 0.42
CLK1-205ENST00000434813 FTSJ1Q9UET6 329 aa17.66■□□□□ 0.42
CLK1-205ENST00000434813 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.66■□□□□ 0.42
CLK1-205ENST00000434813 DUSP12Q9UNI6 340 aa17.66■□□□□ 0.42
CLK1-205ENST00000434813 M0R082 166 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 TMPRSS11DO60235 418 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 PDE9AO76083 593 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 FUT4P22083 530 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 CLCNKAP51800 687 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 NUDT6P53370 316 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 CDC42P60953 191 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 HSPB3Q12988 150 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 AGERQ15109 404 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 TIGD6Q17RP2 521 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 COLEC12Q5KU26 742 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 EGFLAMQ63HQ2 1017 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 TAGAPQ8N103 731 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 PSMA8Q8TAA3 256 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 GTPBP3Q969Y2 492 aaKnown RBP17.65■□□□□ 0.42
CLK1-205ENST00000434813 RGMAQ96B86 450 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 ZHX1-C8orf76Q96EF9 292 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 ZBED6CLQ96FA7 236 aaPredicted RBP17.65■□□□□ 0.42
CLK1-205ENST00000434813 COL21A1Q96P44 957 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 NMNAT1Q9HAN9 279 aaPredicted RBP17.65■□□□□ 0.42
CLK1-205ENST00000434813 TRPV4Q9HBA0 871 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 AMBNQ9NP70 447 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 GPR83Q9NYM4 423 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 ACSL5Q9ULC5 683 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 ZAR1LA6NP61 321 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 FFAR1O14842 300 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms