RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 ZNF182P17025 639 aaPredicted RBP3.6□□□□□ -1.83
SHPRH-205ENST00000433355 XRCC1P18887 633 aaPredicted RBP3.6□□□□□ -1.83
SHPRH-205ENST00000433355 ACSL1P33121 698 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 BMPR1AP36894 532 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 TNFRSF4P43489 277 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 SEPHS1P49903 392 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 ILKQ13418 452 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 SNTA1Q13424 505 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 CDK10Q15131 360 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 DHCR24Q15392 516 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 DECR1Q16698 335 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 SLC5A12Q1EHB4 618 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 PDZK1Q5T2W1 519 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 PTCHD4Q6ZW05 846 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 PEG10Q86TG7 708 aaKnown RBP3.6□□□□□ -1.83
SHPRH-205ENST00000433355 OSTM1Q86WC4 334 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 OR6S1Q8NH40 331 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 LCN9Q8WX39 176 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 DDIT4LQ96D03 193 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 SFXN2Q96NB2 322 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 RPF2Q9H7B2 306 aaKnown RBP3.6□□□□□ -1.83
SHPRH-205ENST00000433355 SARS2Q9NP81 518 aaKnown RBP3.6□□□□□ -1.83
SHPRH-205ENST00000433355 GPN3Q9UHW5 284 aaPredicted RBP3.6□□□□□ -1.83
SHPRH-205ENST00000433355 ABCG2Q9UNQ0 655 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 RNF6Q9Y252 685 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 OBSL1O75147 1896 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 TRAPPC13A5PLN9 417 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 TEX46H3BTG2 121 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 GFYI3L273 518 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 CLIC1O00299 241 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 TNFRSF11BO00300 401 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 ENPP3O14638 875 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 SRPX2O60687 465 aaPredicted RBP3.6□□□□□ -1.83
SHPRH-205ENST00000433355 WISP3O95389 354 aaPredicted RBP3.6□□□□□ -1.83
SHPRH-205ENST00000433355 GGT2P36268 569 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 RABIFP47224 123 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 CDK6Q00534 326 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 SSX2Q16385 188 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 ACTBL2Q562R1 376 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 LRRC66Q68CR7 880 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 PLAG1Q6DJT9 500 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 KCTD18Q6PI47 426 aaPredicted RBP3.6□□□□□ -1.83
SHPRH-205ENST00000433355 FOXR1Q6PIV2 292 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 PAQR3Q6TCH7 311 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 TRAPPC5Q8IUR0 188 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 ZDHHC21Q8IVQ6 265 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 ZMIZ2Q8NF64 920 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 BPIFB1Q8TDL5 484 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 BRIX1Q8TDN6 353 aaKnown RBP3.6□□□□□ -1.83
SHPRH-205ENST00000433355 NXNL1Q96CM4 212 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 ASPNQ9BXN1 380 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 ZDHHC6Q9H6R6 413 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 MOB1AQ9H8S9 216 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 DUS2Q9NX74 493 aaKnown RBP3.6□□□□□ -1.83
SHPRH-205ENST00000433355 LILRA5A6NI73 299 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 ARPC3O15145 178 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 PGM3O95394 542 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 CSF1P09603 554 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 ARL4DP49703 201 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 SF3A3Q12874 501 aaKnown RBP eCLIP3.6□□□□□ -1.83
SHPRH-205ENST00000433355 ELP5Q8TE02 316 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 ADAMTS15Q8TE58 950 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 KHSRPQ92945 711 aaKnown RBP eCLIP3.6□□□□□ -1.838e-7■■□□□ 13.2
SHPRH-205ENST00000433355 PDXPQ96GD0 296 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 GINS4Q9BRT9 223 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 PCDHA9Q9Y5H5 950 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 NPEPPSL1A6NEC2 478 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 C5orf67F2Z3F1 127 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 H3BN98 237 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 TBL1XO60907 577 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 ENTPD6O75354 484 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 LMO2P25791 158 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 NOS3P29474 1203 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 SLC6A6P31641 620 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 NRG3P56975 720 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 LSAMPQ13449 338 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 CEACAM7Q14002 265 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 EFR3AQ14156 821 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 QPRTQ15274 297 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 TMPRSS11BQ86T26 416 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 OAFQ86UD1 273 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.6□□□□□ -1.83
SHPRH-205ENST00000433355 ACVR1CQ8NER5 493 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 BIRC7Q96CA5 298 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 KLF16Q9BXK1 252 aaPredicted RBP3.6□□□□□ -1.83
SHPRH-205ENST00000433355 RANBP3Q9H6Z4 567 aaPredicted RBP3.6□□□□□ -1.83
SHPRH-205ENST00000433355 SNTG1Q9NSN8 517 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 ASB6Q9NWX5 421 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 KLK14Q9P0G3 267 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 MGAT4AQ9UM21 535 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 SHANK1Q9Y566 2161 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 NOX1Q9Y5S8 564 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 A0A1W2PPM1 405 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 E7ENX8 843 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 CDC40O60508 579 aaKnown RBP eCLIP3.6□□□□□ -1.83
SHPRH-205ENST00000433355 FAM20BO75063 409 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 KHDRBS3O75525 346 aaKnown RBP3.6□□□□□ -1.83
SHPRH-205ENST00000433355 TIMP1P01033 207 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 THEGLP0DJG4 465 aa3.6□□□□□ -1.83
SHPRH-205ENST00000433355 STOMP27105 288 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms