RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 HEPACAMQ14CZ8 416 aa11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 ANGPT1Q15389 498 aa11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 KLHL12Q53G59 568 aa11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 KLHL22Q53GT1 634 aa11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 GCNT6Q5T4J0 391 aa11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 GPRC6AQ5T6X5 926 aa11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 CHMP1BQ7LBR1 199 aa11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 TLK2Q86UE8 772 aa11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 KIF18BQ86Y91 864 aa11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 CLDN22Q8N7P3 220 aa11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 CEP76Q8TAP6 659 aa11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 MED8Q96G25 268 aa11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 SMAD5Q99717 465 aaKnown RBP11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 ZFYVE1Q9HBF4 777 aa11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 BEX1Q9HBH7 125 aa11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 STOML2Q9UJZ1 356 aa11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 ZSWIM8A7E2V4 1837 aa11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 TRIP12Q14669 1992 aaPredicted RBP11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 SAP18O00422 153 aaKnown RBP11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 CXCL11O14625 94 aa11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 SLC30A4O14863 429 aa11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 AKAP8O43823 692 aaKnown RBP11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 HCN1O60741 890 aa11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 C6orf47O95873 294 aa11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 CR2P20023 1033 aa11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 ITGB7P26010 798 aa11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 PTX3P26022 381 aaPredicted RBP11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 PXNP49023 591 aaPredicted RBP11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 SMSP52788 366 aa11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 RAB14P61106 215 aa11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 RHOAP61586 193 aa11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 HBA1P69905 142 aa11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 CDK6Q00534 326 aa11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 ZNF730Q6ZMV8 503 aa11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 DEF8Q6ZN54 512 aa11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 PROKR2Q8NFJ6 384 aa11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 IL26Q9NPH9 171 aa11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 RDH8Q9NYR8 311 aa11.03□□□□□ -0.64
HMGCS1-202ENST00000433297 LOC105369274A0A096LPK9 316 aa11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 GSAPA4D1B5 854 aa11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 C2orf78A6NCI8 922 aa11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 IFNW1P05000 195 aa11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 HMGCLP35914 325 aa11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 SGSHP51688 502 aa11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 MEX3DQ86XN8 651 aaKnown RBP11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 OR4N4Q8N0Y3 316 aa11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 GHDCQ8N2G8 530 aa11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 FAM181AQ8N9Y4 354 aa11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 OR8J2Q8NGG1 315 aa11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 SLC7A5P2Q9GIP4 190 aa11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 POLR2J3Q9H1A7 115 aaKnown RBP11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 GPATCH2Q9NW75 528 aa11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 ZNF624Q9P2J8 865 aaPredicted RBP11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 ANKRD36A6QL64 1941 aa11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 C2orf92A0A1B0GVN3 265 aa11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 OR5K3A6NET4 321 aa11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 KDELR3O43731 214 aa11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 SLC43A1O75387 559 aa11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 NR2F6P10588 404 aa11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 STK19P49842 368 aaPredicted RBP11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 AGFG1P52594 562 aaKnown RBP11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 ATP13A5Q4VNC0 1218 aa11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 ZNF628Q5EBL2 1059 aa11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 CD300LGQ6UXG3 332 aa11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 LUZP2Q86TE4 346 aa11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 LAS2Q8IYD9 372 aa11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 DUSP18Q8NEJ0 188 aa11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 BEST4Q8NFU0 473 aa11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 GEMIN6Q8WXD5 167 aaKnown RBP11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 FAM193BQ96PV7 902 aaPredicted RBP11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 MARVELD1Q9BSK0 173 aa11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 SLC25A19Q9HC21 320 aa11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 ENOPH1Q9UHY7 261 aa11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 SCML1Q9UN30 329 aa11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 NOD1Q9Y239 953 aa11.02□□□□□ -0.65
HMGCS1-202ENST00000433297 PRRG1O14668 218 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 SCAMP2O15127 329 aaKnown RBP11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 DPM1O60762 260 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 TRIM3O75382 744 aaPredicted RBP11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 AOAHP28039 575 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 PPP3R1P63098 170 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 MC1RQ01726 317 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 C2orf80Q0P641 193 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 FAM122CQ6P4D5 195 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 UNC5DQ6UXZ4 953 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 ADGRD2Q7Z7M1 963 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 LHFPL3Q86UP9 236 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 OR11H4Q8NGC9 324 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 CIDECQ96AQ7 238 aaPredicted RBP11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 LRR1Q96L50 414 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 TMEM43Q9BTV4 400 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 SPNS1Q9H2V7 528 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 CTPS2Q9NRF8 586 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 SLC9A8Q9Y2E8 581 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 GLYATL1P3A0A0U1RQE8 302 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 PIPSLA2A3N6 862 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 ALDH1A1P00352 501 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 PAHP00439 452 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 GLULP15104 373 aa11.01□□□□□ -0.65
HMGCS1-202ENST00000433297 NAGAP17050 411 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms