RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 H0YJX3 145 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 VIPR1P32241 457 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 ACTR1BP42025 376 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 PPP5CP53041 499 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 ACTR1AP61163 376 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 ID2Q02363 134 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 SPHARQ15513 63 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 TEAD2Q15562 447 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 UNC50Q53HI1 259 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 SFRP4Q6FHJ7 346 aaPredicted RBP13.92□□□□□ -0.18
PTPRU-204ENST00000428026 TTLQ8NG68 377 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 OR5T2Q8NGG2 359 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 NELL2Q99435 816 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 KCNH6Q9H252 994 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 ELOVL2Q9NXB9 296 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 LAMP5Q9UJQ1 280 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 TMEM5Q9Y2B1 443 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 ZNF726A6NNF4 738 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 FMO6PO60774 539 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 GSTM2P28161 218 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 TMEM69Q5SWH9 247 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 ARSKQ6UWY0 536 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 TMIGD1Q6UXZ0 262 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 Q6ZVU0 165 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 RAB11FIP2Q7L804 512 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 NRSN1Q8IZ57 195 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 OR13J1Q8NGT2 312 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 GNPDA2Q8TDQ7 276 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 POLMQ9NP87 494 aaPredicted RBP13.92□□□□□ -0.18
PTPRU-204ENST00000428026 BHMG1C9JSJ3 638 aaPredicted RBP13.92□□□□□ -0.18
PTPRU-204ENST00000428026 H3BMQ9 156 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 NUAK1O60285 661 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 BEST1O76090 585 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 SCNN1AP37088 669 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 MFSD2AQ8NA29 543 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 NSMAFQ92636 917 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 COG8Q96MW5 612 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 SMG9Q9H0W8 520 aaKnown RBP13.92□□□□□ -0.18
PTPRU-204ENST00000428026 ERVK-19Q9WJR5 959 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 HIF3AQ9Y2N7 669 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 INSL5Q9Y5Q6 135 aa13.92□□□□□ -0.18
PTPRU-204ENST00000428026 A0A1B0GVC2 190 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 SLC35E2BP0CK96 405 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 CD1DP15813 335 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 MYF6P23409 242 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 NAA10P41227 235 aaPredicted RBP13.91□□□□□ -0.18
PTPRU-204ENST00000428026 NOXRED1Q6NXP6 359 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 KLBQ86Z14 1044 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 KCTD13Q8WZ19 329 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 DNAJA3Q96EY1 480 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 PRICKLE1Q96MT3 831 aaPredicted RBP13.91□□□□□ -0.18
PTPRU-204ENST00000428026 SLC38A3Q99624 504 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 ADAMTS5Q9UNA0 930 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 A0A1B0GV50 99 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 KRBA1A5PL33 1030 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 AGAP5A6NIR3 686 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 ZNF16P17020 682 aaPredicted RBP13.91□□□□□ -0.18
PTPRU-204ENST00000428026 GKP32189 559 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 IRF5Q13568 498 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 TRAM2Q15035 370 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 ADGRF1Q5T601 910 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 MEDAGQ5VYS4 303 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 ATG9BQ674R7 924 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 SSX6Q7RTT6 188 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 ZSWIM9Q86XI8 627 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 C12orf76Q8N812 135 aaPredicted RBP13.91□□□□□ -0.18
PTPRU-204ENST00000428026 OR10A4Q9H209 315 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 RGCCQ9H4X1 137 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 KCNN3Q9UGI6 736 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 SARDHQ9UL12 918 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 TIMM8BQ9Y5J9 83 aaPredicted RBP13.91□□□□□ -0.18
PTPRU-204ENST00000428026 DNMT3AQ9Y6K1 912 aaPredicted RBP13.91□□□□□ -0.18
PTPRU-204ENST00000428026 RBBP9O75884 186 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 PDYNP01213 254 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 GRIA2P42262 883 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 HK3P52790 923 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 MLLT6P55198 1093 aaPredicted RBP13.91□□□□□ -0.18
PTPRU-204ENST00000428026 MS4A2Q01362 244 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 GPR17Q13304 367 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 ANKRD54Q6NXT1 300 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 HMGB4Q8WW32 186 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 DOHHQ9BU89 302 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 RNF121Q9H920 327 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 CARS2Q9HA77 564 aaKnown RBP13.91□□□□□ -0.18
PTPRU-204ENST00000428026 WNT6Q9Y6F9 365 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 COL2A1P02458 1487 aaPredicted RBP13.91□□□□□ -0.18
PTPRU-204ENST00000428026 FAM72CH0Y354 149 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 HTR2AP28223 471 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 KCNC4Q03721 635 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 SNTB2Q13425 540 aaKnown RBP13.91□□□□□ -0.18
PTPRU-204ENST00000428026 FGFBP1Q14512 234 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 ALG10Q5BKT4 473 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 FAM72AQ5TYM5 149 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 FAM72DQ6L9T8 149 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 FAM72BQ86X60 149 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 SLC44A3Q8N4M1 653 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 METTL25Q8N6Q8 603 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 PSD4Q8NDX1 1056 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 OR6N2Q8NGY6 317 aa13.91□□□□□ -0.18
PTPRU-204ENST00000428026 FRS2Q8WU20 508 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms