RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 OR4N5Q8IXE1 308 aa17.85■□□□□ 0.45
COL9A2-204ENST00000427563 ZCCHC7Q8N3Z6 543 aaKnown RBP17.85■□□□□ 0.45
COL9A2-204ENST00000427563 RGMAQ96B86 450 aa17.85■□□□□ 0.45
COL9A2-204ENST00000427563 MTFMTQ96DP5 389 aaKnown RBP17.85■□□□□ 0.45
COL9A2-204ENST00000427563 VMP1Q96GC9 406 aa17.85■□□□□ 0.45
COL9A2-204ENST00000427563 C1QTNF3Q9BXJ4 246 aa17.85■□□□□ 0.45
COL9A2-204ENST00000427563 DEFB126Q9BYW3 111 aa17.85■□□□□ 0.45
COL9A2-204ENST00000427563 LIN28AQ9H9Z2 209 aaKnown RBP17.85■□□□□ 0.45
COL9A2-204ENST00000427563 LRFN1Q9P244 771 aa17.85■□□□□ 0.45
COL9A2-204ENST00000427563 TMCO1Q9UM00 188 aa17.85■□□□□ 0.45
COL9A2-204ENST00000427563 OSGIN2Q9Y236 505 aa17.85■□□□□ 0.45
COL9A2-204ENST00000427563 ASB4Q9Y574 426 aa17.85■□□□□ 0.45
COL9A2-204ENST00000427563 ASPDHA6ND91 283 aa17.84■□□□□ 0.45
COL9A2-204ENST00000427563 FOXE1O00358 373 aaPredicted RBP17.84■□□□□ 0.45
COL9A2-204ENST00000427563 SMIM24O75264 130 aa17.84■□□□□ 0.45
COL9A2-204ENST00000427563 SHBGP04278 402 aa17.84■□□□□ 0.45
COL9A2-204ENST00000427563 SP1P08047 785 aa17.84■□□□□ 0.45
COL9A2-204ENST00000427563 CPN2P22792 545 aa17.84■□□□□ 0.45
COL9A2-204ENST00000427563 PTX3P26022 381 aaPredicted RBP17.84■□□□□ 0.45
COL9A2-204ENST00000427563 TRHRP34981 398 aaPredicted RBP17.84■□□□□ 0.45
COL9A2-204ENST00000427563 CCNG1P51959 295 aa17.84■□□□□ 0.45
COL9A2-204ENST00000427563 RAP1GDS1P52306 607 aa17.84■□□□□ 0.45
COL9A2-204ENST00000427563 CDH13P55290 713 aa17.84■□□□□ 0.45
COL9A2-204ENST00000427563 CUL3Q13618 768 aa17.84■□□□□ 0.45
COL9A2-204ENST00000427563 LETMD1Q6P1Q0 360 aa17.84■□□□□ 0.45
COL9A2-204ENST00000427563 WDR93Q6P2C0 686 aa17.84■□□□□ 0.45
COL9A2-204ENST00000427563 GALNTL5Q7Z4T8 443 aa17.84■□□□□ 0.45
COL9A2-204ENST00000427563 OR4F6Q8NGB9 312 aa17.84■□□□□ 0.45
COL9A2-204ENST00000427563 SUN3Q8TAQ9 357 aa17.84■□□□□ 0.45
COL9A2-204ENST00000427563 SREK1Q8WXA9 508 aaKnown RBP17.84■□□□□ 0.45
COL9A2-204ENST00000427563 MTBPQ96DY7 904 aa17.84■□□□□ 0.45
COL9A2-204ENST00000427563 DDX31Q9H8H2 851 aaKnown RBP17.84■□□□□ 0.45
COL9A2-204ENST00000427563 SEMA4BQ9NPR2 832 aaPredicted RBP17.84■□□□□ 0.45
COL9A2-204ENST00000427563 PSD3Q9NYI0 1048 aa17.84■□□□□ 0.45
COL9A2-204ENST00000427563 DIDO1Q9BTC0 2240 aaKnown RBP17.84■□□□□ 0.45
COL9A2-204ENST00000427563 GOLGA8RI6L899 631 aa17.83■□□□□ 0.44
COL9A2-204ENST00000427563 PROM1O43490 865 aa17.83■□□□□ 0.44
COL9A2-204ENST00000427563 TNFRSF17Q02223 184 aa17.83■□□□□ 0.44
COL9A2-204ENST00000427563 OC90Q02509 493 aaPredicted RBP17.83■□□□□ 0.44
COL9A2-204ENST00000427563 ELOAQ14241 798 aaKnown RBP17.83■□□□□ 0.44
COL9A2-204ENST00000427563 GGTA1PQ4G0N0 100 aa17.83■□□□□ 0.44
COL9A2-204ENST00000427563 UNC50Q53HI1 259 aa17.83■□□□□ 0.44
COL9A2-204ENST00000427563 SLC25A25Q6KCM7 469 aa17.83■□□□□ 0.44
COL9A2-204ENST00000427563 SH2D5Q6ZV89 423 aa17.83■□□□□ 0.44
COL9A2-204ENST00000427563 GPR180Q86V85 440 aa17.83■□□□□ 0.44
COL9A2-204ENST00000427563 DNAJB8Q8NHS0 232 aa17.83■□□□□ 0.44
COL9A2-204ENST00000427563 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.83■□□□□ 0.44
COL9A2-204ENST00000427563 FRMD6Q96NE9 622 aa17.83■□□□□ 0.44
COL9A2-204ENST00000427563 PARD6BQ9BYG5 372 aa17.83■□□□□ 0.44
COL9A2-204ENST00000427563 FARSBQ9NSD9 589 aaKnown RBP17.83■□□□□ 0.44
COL9A2-204ENST00000427563 FETUBQ9UGM5 382 aa17.83■□□□□ 0.44
COL9A2-204ENST00000427563 PPT2Q9UMR5 302 aa17.83■□□□□ 0.44
COL9A2-204ENST00000427563 SLC5A6Q9Y289 635 aa17.83■□□□□ 0.44
COL9A2-204ENST00000427563 A0A1W2PPM1 405 aa17.82■□□□□ 0.44
COL9A2-204ENST00000427563 A0A1W2PR48 441 aa17.82■□□□□ 0.44
COL9A2-204ENST00000427563 A0A1W2PS29 197 aa17.82■□□□□ 0.44
COL9A2-204ENST00000427563 HRKO00198 91 aa17.82■□□□□ 0.44
COL9A2-204ENST00000427563 DLX3O60479 287 aa17.82■□□□□ 0.44
COL9A2-204ENST00000427563 ZNF354AO60765 605 aaPredicted RBP17.82■□□□□ 0.44
COL9A2-204ENST00000427563 GBAP04062 536 aa17.82■□□□□ 0.44
COL9A2-204ENST00000427563 IFNA16P05015 189 aa17.82■□□□□ 0.44
COL9A2-204ENST00000427563 STSP08842 583 aa17.82■□□□□ 0.44
COL9A2-204ENST00000427563 GP1BBP13224 206 aa17.82■□□□□ 0.44
COL9A2-204ENST00000427563 HLCSP50747 726 aa17.82■□□□□ 0.44
COL9A2-204ENST00000427563 ARFIP1P53367 373 aa17.82■□□□□ 0.44
COL9A2-204ENST00000427563 STX4Q12846 297 aa17.82■□□□□ 0.44
COL9A2-204ENST00000427563 RCN2Q14257 317 aa17.82■□□□□ 0.44
COL9A2-204ENST00000427563 RNFT1Q5M7Z0 435 aa17.82■□□□□ 0.44
COL9A2-204ENST00000427563 FRG2Q64ET8 278 aa17.82■□□□□ 0.44
COL9A2-204ENST00000427563 TMEM132CQ8N3T6 1108 aa17.82■□□□□ 0.44
COL9A2-204ENST00000427563 SLC2A12Q8TD20 617 aa17.82■□□□□ 0.44
COL9A2-204ENST00000427563 DOK4Q8TEW6 326 aa17.82■□□□□ 0.44
COL9A2-204ENST00000427563 ZNF721Q8TF20 911 aa17.82■□□□□ 0.44
COL9A2-204ENST00000427563 ATP6V1E2Q96A05 226 aa17.82■□□□□ 0.44
COL9A2-204ENST00000427563 REPS1Q96D71 796 aa17.82■□□□□ 0.44
COL9A2-204ENST00000427563 TMEM237Q96Q45 408 aa17.82■□□□□ 0.44
COL9A2-204ENST00000427563 FRG2BQ96QU4 278 aa17.82■□□□□ 0.44
COL9A2-204ENST00000427563 RPF2Q9H7B2 306 aaKnown RBP17.82■□□□□ 0.44
COL9A2-204ENST00000427563 PRM3Q9NNZ6 103 aa17.82■□□□□ 0.44
COL9A2-204ENST00000427563 PSMC3IPQ9P2W1 217 aaPredicted RBP17.82■□□□□ 0.44
COL9A2-204ENST00000427563 RAB21Q9UL25 225 aa17.82■□□□□ 0.44
COL9A2-204ENST00000427563 EMCNQ9ULC0 261 aa17.82■□□□□ 0.44
COL9A2-204ENST00000427563 C17orf105B2RV13 164 aa17.81■□□□□ 0.44
COL9A2-204ENST00000427563 NME2P1O60361 137 aa17.81■□□□□ 0.44
COL9A2-204ENST00000427563 ITGA10O75578 1167 aa17.81■□□□□ 0.44
COL9A2-204ENST00000427563 SLC25A12O75746 678 aa17.81■□□□□ 0.44
COL9A2-204ENST00000427563 CLDN1O95832 211 aa17.81■□□□□ 0.44
COL9A2-204ENST00000427563 CRYABP02511 175 aaKnown RBP17.81■□□□□ 0.44
COL9A2-204ENST00000427563 PYGBP11216 843 aa17.81■□□□□ 0.44
COL9A2-204ENST00000427563 CD46P15529 392 aa17.81■□□□□ 0.44
COL9A2-204ENST00000427563 NME2P22392 152 aa17.81■□□□□ 0.44
COL9A2-204ENST00000427563 HSD17B3P37058 310 aa17.81■□□□□ 0.44
COL9A2-204ENST00000427563 FOLH1Q04609 750 aa17.81■□□□□ 0.44
COL9A2-204ENST00000427563 SERTAD2Q14140 314 aa17.81■□□□□ 0.44
COL9A2-204ENST00000427563 C4orf17Q53FE4 359 aa17.81■□□□□ 0.44
COL9A2-204ENST00000427563 ZNF678Q5SXM1 525 aa17.81■□□□□ 0.44
COL9A2-204ENST00000427563 LGSNQ5TDP6 509 aa17.81■□□□□ 0.44
COL9A2-204ENST00000427563 MILR1Q7Z6M3 343 aa17.81■□□□□ 0.44
COL9A2-204ENST00000427563 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.81■□□□□ 0.44
COL9A2-204ENST00000427563 SIAH3Q8IW03 269 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms