RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 HACD4Q5VWC8 232 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 MTFR2Q6P444 385 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 NIPAL3Q6P499 406 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 ERN2Q76MJ5 926 aaKnown RBP13.9□□□□□ -0.18
PTPN13-203ENST00000427191 OR51E2Q9H255 320 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 SDHAF2Q9NX18 166 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 ABRACLQ9P1F3 81 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 EME2A4GXA9 379 aaPredicted RBP13.9□□□□□ -0.18
PTPN13-203ENST00000427191 SAP18O00422 153 aaKnown RBP13.9□□□□□ -0.18
PTPN13-203ENST00000427191 EEF1E1O43324 174 aaKnown RBP13.9□□□□□ -0.18
PTPN13-203ENST00000427191 PORP16435 677 aaPredicted RBP13.9□□□□□ -0.18
PTPN13-203ENST00000427191 SHMT2P34897 504 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 RAB5CP51148 216 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 RIDAP52758 137 aaKnown RBP13.9□□□□□ -0.18
PTPN13-203ENST00000427191 PRMT2P55345 433 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 RAB11BQ15907 218 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 ZNF776Q68DI1 518 aaPredicted RBP13.9□□□□□ -0.18
PTPN13-203ENST00000427191 OR4K14Q8NGD5 310 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 ZDHHC12Q96GR4 267 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 FBXL3Q9UKT7 428 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 SC5DO75845 299 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 CHRNA1P02708 482 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 NUDT7P0C024 238 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 PER3P56645 1201 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 RBM12BQ8IXT5 1001 aaKnown RBP13.9□□□□□ -0.18
PTPN13-203ENST00000427191 LNX2Q8N448 690 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 KCT2Q8NC54 265 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 OR9A1PQ8NGU1 263 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 KIAA1143Q96AT1 154 aaPredicted RBP13.9□□□□□ -0.18
PTPN13-203ENST00000427191 CENPOQ9BU64 300 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 REEP4Q9H6H4 257 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 PADI3Q9ULW8 664 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 RNF215Q9Y6U7 377 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 COL5A2P05997 1499 aaPredicted RBP13.9□□□□□ -0.18
PTPN13-203ENST00000427191 NARSO43776 548 aaKnown RBP13.9□□□□□ -0.18
PTPN13-203ENST00000427191 TGFB1P01137 390 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 GDPGP1Q6ZNW5 385 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 C6orf120Q7Z4R8 191 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 MARVELD2Q8N4S9 558 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 AMBNQ9NP70 447 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 SIX4Q9UIU6 781 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 RPH3AQ9Y2J0 694 aaPredicted RBP13.9□□□□□ -0.18
PTPN13-203ENST00000427191 UBE2J1Q9Y385 318 aaPredicted RBP13.9□□□□□ -0.18
PTPN13-203ENST00000427191 MRPS10P82664 201 aaKnown RBP13.9□□□□□ -0.18
PTPN13-203ENST00000427191 IRF9Q00978 393 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 METTL11BQ5VVY1 283 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 ZNF283Q8N7M2 679 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 A0A1W2PPL8 197 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 TRAPPC6AO75865 159 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 JUNP05412 331 aaKnown RBP13.9□□□□□ -0.18
PTPN13-203ENST00000427191 FHP07954 510 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 CCL23P55773 120 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 SIRPB2Q5JXA9 342 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 RNF130Q86XS8 419 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 ANKRD13BQ86YJ7 626 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 FAM83CQ9BQN1 747 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 SMOC2Q9H3U7 446 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 PCDHB3Q9Y5E6 796 aa13.9□□□□□ -0.18
PTPN13-203ENST00000427191 BCL9LQ86UU0 1499 aa13.9□□□□□ -0.19
PTPN13-203ENST00000427191 ZNF701M0R085 212 aaPredicted RBP13.89□□□□□ -0.19
PTPN13-203ENST00000427191 ENPP3O14638 875 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 SLC31A1O15431 190 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 APBB3O95704 486 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 ADH5P11766 374 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 UNGP13051 313 aaPredicted RBP13.89□□□□□ -0.19
PTPN13-203ENST00000427191 GK2Q14410 553 aaPredicted RBP13.89□□□□□ -0.19
PTPN13-203ENST00000427191 TGFBIQ15582 683 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 CILP2Q8IUL8 1156 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 DRAXINQ8NBI3 349 aaPredicted RBP13.89□□□□□ -0.19
PTPN13-203ENST00000427191 CDKN2AIPNLQ96HQ2 116 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 CDC6Q99741 560 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 PPM1HQ9ULR3 514 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 FMN2Q9NZ56 1722 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 C9JVG2 144 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 APOC3P02656 99 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 OR4F3Q6IEY1 312 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 PHTF2Q8N3S3 785 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 CELF5Q8N6W0 485 aaKnown RBP13.89□□□□□ -0.19
PTPN13-203ENST00000427191 NANOS1Q8WY41 292 aaKnown RBP13.89□□□□□ -0.19
PTPN13-203ENST00000427191 C17orf62Q9BQA9 187 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 AP1M2Q9Y6Q5 423 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 VILLO15195 856 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 MMP20O60882 483 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 GTPBP8Q8N3Z3 284 aaPredicted RBP13.89□□□□□ -0.19
PTPN13-203ENST00000427191 VGLL2Q8N8G2 317 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 KCNJ9Q92806 393 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 HSPBAP1Q96EW2 488 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 PKP2Q99959 881 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 NID2Q14112 1375 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 A0A0U1RQJ8 604 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 ZNF850A8MQ14 1090 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 CKMT2P17540 419 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 SERINC3Q13530 473 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 CYP4V2Q6ZWL3 525 aaPredicted RBP13.89□□□□□ -0.19
PTPN13-203ENST00000427191 TWNKQ96RR1 684 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 ZNF559Q9BR84 538 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 TMEM246Q9BRR3 403 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 KLHL9Q9P2J3 617 aa13.89□□□□□ -0.19
PTPN13-203ENST00000427191 CHD2O14647 1828 aaKnown RBP13.89□□□□□ -0.19
PTPN13-203ENST00000427191 CIB4A0PJX0 185 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms