RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 LRBAP50851 2863 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 C17orf105B2RV13 164 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 HAS3O00219 553 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 KCNAB3O43448 404 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 NME6O75414 186 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 CIAO1O76071 339 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 APOHP02749 345 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 SERPING1P05155 500 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 FRMD6-AS1P0C7T7 363 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 ZNF806P0C7X5 589 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 STAG3L1P0CL83 205 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 GHRP10912 638 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 PAX1P15863 534 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 CASP3P42574 277 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 ERVFC1-1P60608 527 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 TAF13Q15543 124 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 C2orf76Q3KRA6 126 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 ACCSLQ4AC99 568 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 SLC39A12Q504Y0 691 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 WDR38Q5JTN6 314 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 SLC35D3Q5M8T2 416 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 PODNL1Q6PEZ8 512 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 PIGWQ7Z7B1 504 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 SMIM29Q86T20 159 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 ISCA2Q86U28 154 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 SPC24Q8NBT2 197 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 KRT35Q92764 455 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 DYNLL2Q96FJ2 89 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 PDLIM5Q96HC4 596 aaKnown RBP5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 NSL1Q96IY1 281 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 KLHL5Q96PQ7 755 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 CCDC3Q9BQI4 270 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 TRMT61BQ9BVS5 477 aaKnown RBP5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 OR2B2Q9GZK3 357 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 PHPT1Q9NRX4 125 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 P4HTMQ9NXG6 502 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 PA2G4Q9UQ80 394 aaKnown RBP5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 KLK4Q9Y5K2 254 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 LOXHD1Q8IVV2 1947 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 SPAG17Q6Q759 2223 aa5.66□□□□□ -1.5
HMGB1P32-201ENST00000425971 IGKV2D-30A0A075B6S6 120 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 ILVBLA1L0T0 632 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 PRSS46E5RG02 174 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 CTDSPLO15194 276 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 RTN2O75298 545 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 NDUFB10O96000 172 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 F7P08709 466 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 CSTF2P33240 577 aaKnown RBP eCLIP5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 IER3P46695 156 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 UBXN1Q04323 297 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 SULT2A1Q06520 285 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 ARHGAP1Q07960 439 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 ACTN3Q08043 901 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 ARL16Q0P5N6 197 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 LASP1Q14847 261 aaKnown RBP5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 HERC3Q15034 1050 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 RBBP7Q16576 425 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 FUT11Q495W5 492 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 TMEM270Q6UE05 265 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 KCTD9Q7L273 389 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 LMNTD1Q8N9Z9 388 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 ZNF383Q8NA42 475 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 COLGALT1Q8NBJ5 622 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 DEFB124Q8NES8 71 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 TSACCQ96A04 125 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 CLDN23Q96B33 292 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 PGM2Q96G03 612 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 ZNF354BQ96LW1 612 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 CCDC43Q96MW1 224 aaKnown RBP5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 NDNQ99608 321 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 ATG101Q9BSB4 218 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 EDEM2Q9BV94 578 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 SHARPINQ9H0F6 387 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 CPVLQ9H3G5 476 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 CHST11Q9NPF2 352 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 ECHDC1Q9NTX5 307 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 FAM118AQ9NWS6 357 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 DONSONQ9NYP3 566 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 PKD2L2Q9NZM6 624 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 FBXL5Q9UKA1 691 aa5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 HBS1LQ9Y450 684 aaKnown RBP5.65□□□□□ -1.5
HMGB1P32-201ENST00000425971 COL5A1P20908 1838 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P32-201ENST00000425971 F5P12259 2224 aa5.64□□□□□ -1.51
HMGB1P32-201ENST00000425971 ASCC3Q8N3C0 2202 aaKnown RBP5.64□□□□□ -1.51
HMGB1P32-201ENST00000425971 MYH15Q9Y2K3 1946 aa5.64□□□□□ -1.51
HMGB1P32-201ENST00000425971 NAV3Q8IVL0 2385 aa5.64□□□□□ -1.51
HMGB1P32-201ENST00000425971 CCL24O00175 119 aa5.64□□□□□ -1.51
HMGB1P32-201ENST00000425971 MOCS2O96007 188 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P32-201ENST00000425971 C8orf89P0DMQ9 161 aa5.64□□□□□ -1.51
HMGB1P32-201ENST00000425971 CEACAM1P13688 526 aa5.64□□□□□ -1.51
HMGB1P32-201ENST00000425971 CCKARP32238 428 aa5.64□□□□□ -1.51
HMGB1P32-201ENST00000425971 MAGEA9P43362 315 aa5.64□□□□□ -1.51
HMGB1P32-201ENST00000425971 OR3A1P47881 315 aa5.64□□□□□ -1.51
HMGB1P32-201ENST00000425971 NPBWR1P48145 328 aa5.64□□□□□ -1.51
HMGB1P32-201ENST00000425971 SNAP25P60880 206 aa5.64□□□□□ -1.51
HMGB1P32-201ENST00000425971 GCNT1Q02742 428 aa5.64□□□□□ -1.51
HMGB1P32-201ENST00000425971 POU3F1Q03052 451 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P32-201ENST00000425971 TRAP1Q12931 704 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms