RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 OR5H15A6NDH6 313 aa17.47■□□□□ 0.39
PRNP-202ENST00000424424 H3BQF6 201 aa17.47■□□□□ 0.39
PRNP-202ENST00000424424 LDB3O75112 727 aa17.47■□□□□ 0.39
PRNP-202ENST00000424424 EEDO75530 441 aaKnown RBP17.47■□□□□ 0.39
PRNP-202ENST00000424424 WDPCPO95876 746 aa17.47■□□□□ 0.39
PRNP-202ENST00000424424 FAM58BPP0C7Q3 252 aa17.47■□□□□ 0.39
PRNP-202ENST00000424424 TNNI3P19429 210 aa17.47■□□□□ 0.39
PRNP-202ENST00000424424 CLCN2P51788 898 aa17.47■□□□□ 0.39
PRNP-202ENST00000424424 TNFRSF17Q02223 184 aa17.47■□□□□ 0.39
PRNP-202ENST00000424424 FCRLBQ6BAA4 426 aa17.47■□□□□ 0.39
PRNP-202ENST00000424424 TRABD2AQ86V40 505 aa17.47■□□□□ 0.39
PRNP-202ENST00000424424 CRLF3Q8IUI8 442 aa17.47■□□□□ 0.39
PRNP-202ENST00000424424 LGI4Q8N135 537 aa17.47■□□□□ 0.39
PRNP-202ENST00000424424 CISD2Q8N5K1 135 aaKnown RBP17.47■□□□□ 0.39
PRNP-202ENST00000424424 CATSPER1Q8NEC5 780 aa17.47■□□□□ 0.39
PRNP-202ENST00000424424 NFAM1Q8NET5 270 aaPredicted RBP17.47■□□□□ 0.39
PRNP-202ENST00000424424 OR1N1Q8NGS0 311 aa17.47■□□□□ 0.39
PRNP-202ENST00000424424 VMP1Q96GC9 406 aa17.47■□□□□ 0.39
PRNP-202ENST00000424424 APOPT1Q96IL0 206 aa17.47■□□□□ 0.39
PRNP-202ENST00000424424 ZNF717Q9BY31 904 aaPredicted RBP17.47■□□□□ 0.39
PRNP-202ENST00000424424 DEFB126Q9BYW3 111 aa17.47■□□□□ 0.39
PRNP-202ENST00000424424 FARSBQ9NSD9 589 aaKnown RBP17.47■□□□□ 0.39
PRNP-202ENST00000424424 VTI1BQ9UEU0 232 aa17.47■□□□□ 0.39
PRNP-202ENST00000424424 ZNF225Q9UK10 706 aa17.47■□□□□ 0.39
PRNP-202ENST00000424424 ADAM29Q9UKF5 820 aa17.47■□□□□ 0.39
PRNP-202ENST00000424424 PCDHGA10Q9Y5H3 936 aa17.47■□□□□ 0.39
PRNP-202ENST00000424424 CLDN16Q9Y5I7 305 aa17.47■□□□□ 0.39
PRNP-202ENST00000424424 COPG1Q9Y678 874 aaKnown RBP17.47■□□□□ 0.39
PRNP-202ENST00000424424 TGFBR3LH3BV60 316 aa17.46■□□□□ 0.39
PRNP-202ENST00000424424 CDK2AP1O14519 115 aa17.46■□□□□ 0.39
PRNP-202ENST00000424424 PROM1O43490 865 aa17.46■□□□□ 0.39
PRNP-202ENST00000424424 ULK1O75385 1050 aa17.46■□□□□ 0.39
PRNP-202ENST00000424424 ENO1P06733 434 aaKnown RBP17.46■□□□□ 0.39
PRNP-202ENST00000424424 HSD3B1P14060 373 aa17.46■□□□□ 0.39
PRNP-202ENST00000424424 COX7A2P14406 83 aa17.46■□□□□ 0.39
PRNP-202ENST00000424424 HSD3B2P26439 372 aa17.46■□□□□ 0.39
PRNP-202ENST00000424424 TNFSF10P50591 281 aa17.46■□□□□ 0.39
PRNP-202ENST00000424424 NAGLUP54802 743 aa17.46■□□□□ 0.39
PRNP-202ENST00000424424 HNRNPH2P55795 449 aaKnown RBP17.46■□□□□ 0.39
PRNP-202ENST00000424424 DNAJB13P59910 316 aa17.46■□□□□ 0.39
PRNP-202ENST00000424424 MRM1Q6IN84 353 aaKnown RBP17.46■□□□□ 0.39
PRNP-202ENST00000424424 RPS19BP1Q86WX3 136 aaKnown RBP17.46■□□□□ 0.39
PRNP-202ENST00000424424 SRRM1Q8IYB3 904 aaKnown RBP17.46■□□□□ 0.39
PRNP-202ENST00000424424 BEST3Q8N1M1 668 aa17.46■□□□□ 0.39
PRNP-202ENST00000424424 METTL4Q8N3J2 472 aa17.46■□□□□ 0.39
PRNP-202ENST00000424424 KIF2BQ8N4N8 673 aa17.46■□□□□ 0.39
PRNP-202ENST00000424424 OR14A16Q8NHC5 309 aa17.46■□□□□ 0.39
PRNP-202ENST00000424424 SNRNP40Q96DI7 357 aaKnown RBP17.46■□□□□ 0.39
PRNP-202ENST00000424424 SMC6Q96SB8 1091 aa17.46■□□□□ 0.39
PRNP-202ENST00000424424 TMEM109Q9BVC6 243 aa17.46■□□□□ 0.39
PRNP-202ENST00000424424 MRPL1Q9BYD6 325 aaKnown RBP17.46■□□□□ 0.39
PRNP-202ENST00000424424 GSTO2Q9H4Y5 243 aa17.46■□□□□ 0.39
PRNP-202ENST00000424424 CDCP1Q9H5V8 836 aa17.46■□□□□ 0.39
PRNP-202ENST00000424424 CLMPQ9H6B4 373 aa17.46■□□□□ 0.39
PRNP-202ENST00000424424 MID1IP1Q9NPA3 183 aa17.46■□□□□ 0.39
PRNP-202ENST00000424424 AGPAT4Q9NRZ5 378 aa17.46■□□□□ 0.39
PRNP-202ENST00000424424 OXSMQ9NWU1 459 aa17.46■□□□□ 0.39
PRNP-202ENST00000424424 MKS1Q9NXB0 559 aa17.46■□□□□ 0.39
PRNP-202ENST00000424424 ATG4BQ9Y4P1 393 aa17.46■□□□□ 0.39
PRNP-202ENST00000424424 ASB4Q9Y574 426 aa17.46■□□□□ 0.39
PRNP-202ENST00000424424 MANBAO00462 879 aa17.45■□□□□ 0.38
PRNP-202ENST00000424424 DYRK3O43781 588 aa17.45■□□□□ 0.38
PRNP-202ENST00000424424 TMPRSS11DO60235 418 aa17.45■□□□□ 0.38
PRNP-202ENST00000424424 GUCY1B2O75343 617 aa17.45■□□□□ 0.38
PRNP-202ENST00000424424 ESRRBO95718 433 aa17.45■□□□□ 0.38
PRNP-202ENST00000424424 F10P00742 488 aa17.45■□□□□ 0.38
PRNP-202ENST00000424424 KLK1P06870 262 aa17.45■□□□□ 0.38
PRNP-202ENST00000424424 NR2F6P10588 404 aa17.45■□□□□ 0.38
PRNP-202ENST00000424424 ASPHQ12797 758 aa17.45■□□□□ 0.38
PRNP-202ENST00000424424 CSTF3Q12996 717 aaKnown RBP17.45■□□□□ 0.38
PRNP-202ENST00000424424 PRR30Q53SZ7 412 aaPredicted RBP17.45■□□□□ 0.38
PRNP-202ENST00000424424 CCNYL2Q5T2Q4 361 aa17.45■□□□□ 0.38
PRNP-202ENST00000424424 LIPMQ5VYY2 423 aa17.45■□□□□ 0.38
PRNP-202ENST00000424424 C18orf63Q68DL7 685 aa17.45■□□□□ 0.38
PRNP-202ENST00000424424 RPUSD3Q6P087 351 aaKnown RBP17.45■□□□□ 0.38
PRNP-202ENST00000424424 GALNT11Q8NCW6 608 aa17.45■□□□□ 0.38
PRNP-202ENST00000424424 MORN4Q8NDC4 146 aa17.45■□□□□ 0.38
PRNP-202ENST00000424424 ANKRD9Q96BM1 317 aaPredicted RBP17.45■□□□□ 0.38
PRNP-202ENST00000424424 RBM18Q96H35 190 aaKnown RBP17.45■□□□□ 0.38
PRNP-202ENST00000424424 DGAT2Q96PD7 388 aa17.45■□□□□ 0.38
PRNP-202ENST00000424424 UTP23Q9BRU9 249 aaKnown RBP17.45■□□□□ 0.38
PRNP-202ENST00000424424 VPS29Q9UBQ0 182 aa17.45■□□□□ 0.38
PRNP-202ENST00000424424 PPIEQ9UNP9 301 aaKnown RBP17.45■□□□□ 0.38
PRNP-202ENST00000424424 PLLPQ9Y342 182 aa17.45■□□□□ 0.38
PRNP-202ENST00000424424 CNTRLQ7Z7A1 2325 aa17.45■□□□□ 0.38
PRNP-202ENST00000424424 TENM4Q6N022 2769 aa17.45■□□□□ 0.38
PRNP-202ENST00000424424 TRBV11-1A0A0K0K1C0 115 aa17.44■□□□□ 0.38
PRNP-202ENST00000424424 MYOCOSA0A1B0GUC4 107 aa17.44■□□□□ 0.38
PRNP-202ENST00000424424 FCHO1O14526 889 aa17.44■□□□□ 0.38
PRNP-202ENST00000424424 FGF17O60258 216 aa17.44■□□□□ 0.38
PRNP-202ENST00000424424 CRCPO75575 148 aa17.44■□□□□ 0.38
PRNP-202ENST00000424424 GBAP04062 536 aa17.44■□□□□ 0.38
PRNP-202ENST00000424424 ID2Q02363 134 aa17.44■□□□□ 0.38
PRNP-202ENST00000424424 KRT71Q3SY84 523 aa17.44■□□□□ 0.38
PRNP-202ENST00000424424 HORMAD2Q8N7B1 307 aa17.44■□□□□ 0.38
PRNP-202ENST00000424424 GBP7Q8N8V2 638 aaPredicted RBP17.44■□□□□ 0.38
PRNP-202ENST00000424424 BANPQ8N9N5 519 aa17.44■□□□□ 0.38
PRNP-202ENST00000424424 APCDD1LQ8NCL9 501 aa17.44■□□□□ 0.38
PRNP-202ENST00000424424 AGAP11Q8TF27 550 aa17.44■□□□□ 0.38
PRNP-202ENST00000424424 NCLNQ969V3 563 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms