RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 AGGF1Q8N302 714 aaeCLIP15.41■□□□□ 0.063e-6■■■■□ 20.2
CHCHD3-202ENST00000423635 FAM47BQ8NA70 645 aa15.41■□□□□ 0.06
CHCHD3-202ENST00000423635 FAM167BQ9BTA0 163 aa15.41■□□□□ 0.06
CHCHD3-202ENST00000423635 OR8D2Q9GZM6 311 aa15.41■□□□□ 0.06
CHCHD3-202ENST00000423635 PROK2Q9HC23 129 aa15.41■□□□□ 0.06
CHCHD3-202ENST00000423635 XAB2Q9HCS7 855 aaKnown RBP15.41■□□□□ 0.06
CHCHD3-202ENST00000423635 IARS2Q9NSE4 1012 aaKnown RBP15.41■□□□□ 0.06
CHCHD3-202ENST00000423635 BOKQ9UMX3 212 aaPredicted RBP15.41■□□□□ 0.06
CHCHD3-202ENST00000423635 DAPP1Q9UN19 280 aa15.41■□□□□ 0.06
CHCHD3-202ENST00000423635 SLC22A14Q9Y267 594 aa15.41■□□□□ 0.06
CHCHD3-202ENST00000423635 A0A088AWK7 358 aa15.4■□□□□ 0.06
CHCHD3-202ENST00000423635 A0A1W2PPR1 153 aa15.4■□□□□ 0.06
CHCHD3-202ENST00000423635 KDM4EB2RXH2 506 aaPredicted RBP15.4■□□□□ 0.06
CHCHD3-202ENST00000423635 ERI3O43414 337 aaKnown RBP15.4■□□□□ 0.06
CHCHD3-202ENST00000423635 GUCA1CO95843 209 aa15.4■□□□□ 0.06
CHCHD3-202ENST00000423635 ZNF10P21506 573 aaPredicted RBP15.4■□□□□ 0.06
CHCHD3-202ENST00000423635 SAT1P21673 171 aa15.4■□□□□ 0.06
CHCHD3-202ENST00000423635 HNRNPH1P31943 449 aaKnown RBP15.4■□□□□ 0.06
CHCHD3-202ENST00000423635 MAGEA3P43357 314 aa15.4■□□□□ 0.06
CHCHD3-202ENST00000423635 LIM2P55344 173 aa15.4■□□□□ 0.06
CHCHD3-202ENST00000423635 EFTUD2Q15029 972 aaKnown RBP eCLIP15.4■□□□□ 0.06
CHCHD3-202ENST00000423635 CIARTQ8N365 385 aaPredicted RBP15.4■□□□□ 0.06
CHCHD3-202ENST00000423635 TTLQ8NG68 377 aa15.4■□□□□ 0.06
CHCHD3-202ENST00000423635 NUBPLQ8TB37 319 aa15.4■□□□□ 0.06
CHCHD3-202ENST00000423635 SLC2A12Q8TD20 617 aa15.4■□□□□ 0.06
CHCHD3-202ENST00000423635 ZNF721Q8TF20 911 aa15.4■□□□□ 0.06
CHCHD3-202ENST00000423635 MAIP1Q8WWC4 291 aa15.4■□□□□ 0.06
CHCHD3-202ENST00000423635 SREK1Q8WXA9 508 aaKnown RBP15.4■□□□□ 0.06
CHCHD3-202ENST00000423635 SIGLEC10Q96LC7 697 aa15.4■□□□□ 0.06
CHCHD3-202ENST00000423635 SERPINB12Q96P63 405 aa15.4■□□□□ 0.06
CHCHD3-202ENST00000423635 CSF3RQ99062 836 aa15.4■□□□□ 0.06
CHCHD3-202ENST00000423635 YIPF4Q9BSR8 244 aa15.4■□□□□ 0.06
CHCHD3-202ENST00000423635 SLC6A15Q9H2J7 730 aa15.4■□□□□ 0.06
CHCHD3-202ENST00000423635 EPB41L4BQ9H329 900 aa15.4■□□□□ 0.06
CHCHD3-202ENST00000423635 A0A0G2JN53 185 aa15.39■□□□□ 0.05
CHCHD3-202ENST00000423635 LRRC3CA6NJW4 275 aa15.39■□□□□ 0.05
CHCHD3-202ENST00000423635 C17orf105B2RV13 164 aa15.39■□□□□ 0.05
CHCHD3-202ENST00000423635 TNNI3P19429 210 aa15.39■□□□□ 0.05
CHCHD3-202ENST00000423635 GSTM2P28161 218 aa15.39■□□□□ 0.05
CHCHD3-202ENST00000423635 PCSK6P29122 969 aa15.39■□□□□ 0.05
CHCHD3-202ENST00000423635 STX4Q12846 297 aa15.39■□□□□ 0.05
CHCHD3-202ENST00000423635 GPS1Q13098 491 aa15.39■□□□□ 0.05
CHCHD3-202ENST00000423635 SERTAD2Q14140 314 aa15.39■□□□□ 0.05
CHCHD3-202ENST00000423635 RCN2Q14257 317 aa15.39■□□□□ 0.05
CHCHD3-202ENST00000423635 TRIP13Q15645 432 aaPredicted RBP15.39■□□□□ 0.05
CHCHD3-202ENST00000423635 ADPRMQ3LIE5 342 aa15.39■□□□□ 0.05
CHCHD3-202ENST00000423635 RBM20Q5T481 1227 aaKnown RBP15.39■□□□□ 0.05
CHCHD3-202ENST00000423635 NSUN5P2Q63ZY6 315 aa15.39■□□□□ 0.05
CHCHD3-202ENST00000423635 LYPD8Q6UX82 237 aa15.39■□□□□ 0.05
CHCHD3-202ENST00000423635 CAPN12Q6ZSI9 719 aa15.39■□□□□ 0.05
CHCHD3-202ENST00000423635 TMEM139Q8IV31 216 aa15.39■□□□□ 0.05
CHCHD3-202ENST00000423635 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.39■□□□□ 0.05
CHCHD3-202ENST00000423635 SLC15A4Q8N697 577 aa15.39■□□□□ 0.05
CHCHD3-202ENST00000423635 PDLIM5Q96HC4 596 aaKnown RBP15.39■□□□□ 0.05
CHCHD3-202ENST00000423635 DACH2Q96NX9 599 aa15.39■□□□□ 0.05
CHCHD3-202ENST00000423635 SERINC2Q96SA4 455 aa15.39■□□□□ 0.05
CHCHD3-202ENST00000423635 TIMP4Q99727 224 aa15.39■□□□□ 0.05
CHCHD3-202ENST00000423635 PIP5K1AQ99755 562 aa15.39■□□□□ 0.05
CHCHD3-202ENST00000423635 BAG1Q99933 345 aaPredicted RBP15.39■□□□□ 0.05
CHCHD3-202ENST00000423635 DESI2Q9BSY9 194 aa15.39■□□□□ 0.05
CHCHD3-202ENST00000423635 HOMER3Q9NSC5 361 aa15.39■□□□□ 0.05
CHCHD3-202ENST00000423635 RYDENQ9NUL5 291 aaKnown RBP15.39■□□□□ 0.05
CHCHD3-202ENST00000423635 CNIH4Q9P003 139 aa15.39■□□□□ 0.05
CHCHD3-202ENST00000423635 NCKAP5O14513 1909 aa15.38■□□□□ 0.05
CHCHD3-202ENST00000423635 MYOCOSA0A1B0GUC4 107 aa15.38■□□□□ 0.05
CHCHD3-202ENST00000423635 ETHE1O95571 254 aa15.38■□□□□ 0.05
CHCHD3-202ENST00000423635 TBX6O95947 436 aaPredicted RBP15.38■□□□□ 0.05
CHCHD3-202ENST00000423635 IL18BPO95998 194 aa15.38■□□□□ 0.05
CHCHD3-202ENST00000423635 FGGP02679 453 aa15.38■□□□□ 0.05
CHCHD3-202ENST00000423635 AHSGP02765 367 aa15.38■□□□□ 0.05
CHCHD3-202ENST00000423635 C1GALT1C1LP0DN25 315 aa15.38■□□□□ 0.05
CHCHD3-202ENST00000423635 WNT3P56703 355 aa15.38■□□□□ 0.05
CHCHD3-202ENST00000423635 KCNJ2P63252 427 aa15.38■□□□□ 0.05
CHCHD3-202ENST00000423635 CRYZQ08257 329 aaKnown RBP15.38■□□□□ 0.05
CHCHD3-202ENST00000423635 ASPHQ12797 758 aa15.38■□□□□ 0.05
CHCHD3-202ENST00000423635 DUSP8Q13202 625 aa15.38■□□□□ 0.05
CHCHD3-202ENST00000423635 SF3B4Q15427 424 aaKnown RBP eCLIP15.38■□□□□ 0.05
CHCHD3-202ENST00000423635 SBSNQ6UWP8 590 aa15.38■□□□□ 0.05
CHCHD3-202ENST00000423635 PRSS57Q6UWY2 283 aa15.38■□□□□ 0.05
CHCHD3-202ENST00000423635 TMIGD1Q6UXZ0 262 aa15.38■□□□□ 0.05
CHCHD3-202ENST00000423635 DND1Q8IYX4 353 aaKnown RBP15.38■□□□□ 0.05
CHCHD3-202ENST00000423635 RASGEF1CQ8N431 466 aa15.38■□□□□ 0.05
CHCHD3-202ENST00000423635 LIX1Q8N485 282 aa15.38■□□□□ 0.05
CHCHD3-202ENST00000423635 LRRN4CLQ8ND94 238 aa15.38■□□□□ 0.05
CHCHD3-202ENST00000423635 SIMC1Q8NDZ2 872 aa15.38■□□□□ 0.05
CHCHD3-202ENST00000423635 C7orf57Q8NEG2 295 aa15.38■□□□□ 0.05
CHCHD3-202ENST00000423635 OR2L5Q8NG80 312 aa15.38■□□□□ 0.05
CHCHD3-202ENST00000423635 SMPDL3BQ92485 455 aa15.38■□□□□ 0.05
CHCHD3-202ENST00000423635 KIAA1191Q96A73 305 aa15.38■□□□□ 0.05
CHCHD3-202ENST00000423635 HSPBAP1Q96EW2 488 aa15.38■□□□□ 0.05
CHCHD3-202ENST00000423635 PRDM14Q9GZV8 571 aa15.38■□□□□ 0.05
CHCHD3-202ENST00000423635 NT5DC2Q9H857 520 aa15.38■□□□□ 0.05
CHCHD3-202ENST00000423635 HIVEP2P31629 2446 aa15.38■□□□□ 0.05
CHCHD3-202ENST00000423635 CD8B2A6NJW9 211 aa15.37■□□□□ 0.05
CHCHD3-202ENST00000423635 H2AFYO75367 372 aaKnown RBP15.37■□□□□ 0.05
CHCHD3-202ENST00000423635 CLEC3AO75596 197 aa15.37■□□□□ 0.05
CHCHD3-202ENST00000423635 C1QAP02745 245 aa15.37■□□□□ 0.05
CHCHD3-202ENST00000423635 PTMSP20962 102 aa15.37■□□□□ 0.05
CHCHD3-202ENST00000423635 CTSSP25774 331 aa15.37■□□□□ 0.05
CHCHD3-202ENST00000423635 HPDP32754 393 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms