RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 PCDHGB7Q9Y5F8 929 aa9.09□□□□□ -0.95
HERC3-204ENST00000422770 ATMQ13315 3056 aa9.09□□□□□ -0.95
HERC3-204ENST00000422770 COL6A6A6NMZ7 2263 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 H0YIV9 168 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 PPP6CO00743 305 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 TBX6O95947 436 aaPredicted RBP9.08□□□□□ -0.96
HERC3-204ENST00000422770 GBAP04062 536 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 CYC1P08574 325 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 ICAM2P13598 275 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 PLA2G2AP14555 144 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 HIST1H1TP22492 207 aaPredicted RBP9.08□□□□□ -0.96
HERC3-204ENST00000422770 TLX1P31314 330 aaPredicted RBP9.08□□□□□ -0.96
HERC3-204ENST00000422770 PKNOX1P55347 436 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 TAS2R50P59544 299 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 AP2B1P63010 937 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 ARG2P78540 354 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 ID2Q02363 134 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 TLE1Q04724 770 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 ZNF33BQ06732 778 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 STX4Q12846 297 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 SLAMF1Q13291 335 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 EXT1Q16394 746 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 ADPRMQ3LIE5 342 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 DEPDC1Q5TB30 811 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 ABHD17BQ5VST6 288 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 FCRLBQ6BAA4 426 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 CLEC6AQ6EIG7 209 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 LETMD1Q6P1Q0 360 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 ISLR2Q6UXK2 745 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 QSOX2Q6ZRP7 698 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 NUDT13Q86X67 352 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 AMER2Q8N7J2 671 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 PLPP5Q8NEB5 264 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 PPP1R36Q96LQ0 422 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 SERPINI1Q99574 410 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 NTMT1Q9BV86 223 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 EPN3Q9H201 632 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 ZNF552Q9H707 407 aaPredicted RBP9.08□□□□□ -0.96
HERC3-204ENST00000422770 CLK4Q9HAZ1 481 aaKnown RBP9.08□□□□□ -0.96
HERC3-204ENST00000422770 ZBTB20Q9HC78 741 aaPredicted RBP9.08□□□□□ -0.96
HERC3-204ENST00000422770 TNFRSF12AQ9NP84 129 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 NECTIN3Q9NQS3 549 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 PRDM7Q9NQW5 492 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 THAP1Q9NVV9 213 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 C5AR2Q9P296 337 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 TRPS1Q9UHF7 1281 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 DAPP1Q9UN19 280 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 RAP2CQ9Y3L5 183 aa9.08□□□□□ -0.96
HERC3-204ENST00000422770 HELZ2Q9BYK8 2649 aaKnown RBP9.08□□□□□ -0.96
HERC3-204ENST00000422770 PIEZO2Q9H5I5 2752 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 LOC102723996A0A087X1L8 192 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 A0A1B0GTL3 188 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 DYTNA2CJ06 578 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 PLPP1O14494 284 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 UBFD1O14562 309 aaKnown RBP9.07□□□□□ -0.96
HERC3-204ENST00000422770 AZIN1O14977 448 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 SUV39H1O43463 412 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 LDB3O75112 727 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 MYO1DO94832 1006 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 PDYNP01213 254 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 KRT6AP02538 564 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 KRT6BP04259 564 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 SERPINA7P05543 415 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 TNNI3P19429 210 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 DRD4P21917 467 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 CASRP41180 1078 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 BUD31P41223 144 aaPredicted RBP9.07□□□□□ -0.96
HERC3-204ENST00000422770 KRT6CP48668 564 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 CD97P48960 835 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 HTR6P50406 440 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 ST13P50502 369 aaKnown RBP9.07□□□□□ -0.96
HERC3-204ENST00000422770 HNRNPFP52597 415 aaKnown RBP9.07□□□□□ -0.96
HERC3-204ENST00000422770 MLLT10P55197 1068 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 NAA20P61599 178 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 PCDH1Q08174 1060 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 E2F2Q14209 437 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 CRB2Q5IJ48 1285 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 TCHHL1Q5QJ38 904 aaPredicted RBP9.07□□□□□ -0.96
HERC3-204ENST00000422770 B3GNTL1Q67FW5 361 aaPredicted RBP9.07□□□□□ -0.96
HERC3-204ENST00000422770 SLC6A19Q695T7 634 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 CGB2Q6NT52 195 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 JMJD6Q6NYC1 403 aaPredicted RBP9.07□□□□□ -0.96
HERC3-204ENST00000422770 RIPOR1Q6ZS17 1223 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 UBE3DQ7Z6J8 389 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 CPLX4Q7Z7G2 160 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 HPS6Q86YV9 775 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 ZNF595Q8IYB9 648 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 TMEM52Q8NDY8 209 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 OR6Y1Q8NGX8 325 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 DNAJB14Q8TBM8 379 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 WDR20Q8TBZ3 569 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 METTL6Q8TCB7 284 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 ZNF317Q96PQ6 595 aaPredicted RBP9.07□□□□□ -0.96
HERC3-204ENST00000422770 MRPL1Q9BYD6 325 aaKnown RBP9.07□□□□□ -0.96
HERC3-204ENST00000422770 C20orf27Q9GZN8 174 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.07□□□□□ -0.96
HERC3-204ENST00000422770 WDR41Q9HAD4 459 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 LYRM4Q9HD34 91 aa9.07□□□□□ -0.96
HERC3-204ENST00000422770 FARSBQ9NSD9 589 aaKnown RBP9.07□□□□□ -0.96
HERC3-204ENST00000422770 PNPOQ9NVS9 261 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms