RNA–Protein interactions for RNA: ENST00000419016.6

CHMP5-202, Transcript of charged multivesicular body protein 5, humanhuman

TSL 2 BASIC

Gene CHMP5, Length 1,957 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-202ENST00000419016 NIPAL1Q6NVV3 410 aa13.02□□□□□ -0.32
CHMP5-202ENST00000419016 FAM180BQ6P0A1 224 aa13.02□□□□□ -0.32
CHMP5-202ENST00000419016 PRR23CQ6ZRP0 262 aa13.02□□□□□ -0.32
CHMP5-202ENST00000419016 PSMA8Q8TAA3 256 aa13.02□□□□□ -0.32
CHMP5-202ENST00000419016 CCDC74BQ96LY2 380 aa13.02□□□□□ -0.32
CHMP5-202ENST00000419016 GBP5Q96PP8 586 aa13.02□□□□□ -0.32
CHMP5-202ENST00000419016 GFM1Q96RP9 751 aaKnown RBP13.02□□□□□ -0.32
CHMP5-202ENST00000419016 CSF3RQ99062 836 aa13.02□□□□□ -0.32
CHMP5-202ENST00000419016 CLK4Q9HAZ1 481 aaKnown RBP13.02□□□□□ -0.32
CHMP5-202ENST00000419016 TMEM9BQ9NQ34 198 aa13.02□□□□□ -0.32
CHMP5-202ENST00000419016 FGF21Q9NSA1 209 aa13.02□□□□□ -0.32
CHMP5-202ENST00000419016 ACSS1Q9NUB1 689 aaPredicted RBP13.02□□□□□ -0.32
CHMP5-202ENST00000419016 FTSJ1Q9UET6 329 aa13.02□□□□□ -0.32
CHMP5-202ENST00000419016 A0A0A6YYC8 382 aaPredicted RBP13.01□□□□□ -0.33
CHMP5-202ENST00000419016 A0A1W2PRB8 838 aa13.01□□□□□ -0.33
CHMP5-202ENST00000419016 GLOD5A6NK44 160 aa13.01□□□□□ -0.33
CHMP5-202ENST00000419016 MYO1GB0I1T2 1018 aa13.01□□□□□ -0.33
CHMP5-202ENST00000419016 H0YHG0 523 aa13.01□□□□□ -0.33
CHMP5-202ENST00000419016 I3L1I5 382 aaPredicted RBP13.01□□□□□ -0.33
CHMP5-202ENST00000419016 MGRN1O60291 552 aa13.01□□□□□ -0.33
CHMP5-202ENST00000419016 C6orf47O95873 294 aa13.01□□□□□ -0.33
CHMP5-202ENST00000419016 NR2F6P10588 404 aa13.01□□□□□ -0.33
CHMP5-202ENST00000419016 MTPNP58546 118 aa13.01□□□□□ -0.33
CHMP5-202ENST00000419016 NAXDQ8IW45 347 aa13.01□□□□□ -0.33
CHMP5-202ENST00000419016 FAM156AQ8NDB6 213 aa13.01□□□□□ -0.33
CHMP5-202ENST00000419016 OR5P2Q8WZ92 322 aa13.01□□□□□ -0.33
CHMP5-202ENST00000419016 EXOSC8Q96B26 276 aaKnown RBP13.01□□□□□ -0.33
CHMP5-202ENST00000419016 CNRIP1Q96F85 164 aaPredicted RBP13.01□□□□□ -0.33
CHMP5-202ENST00000419016 AURKBQ96GD4 344 aaPredicted RBP13.01□□□□□ -0.33
CHMP5-202ENST00000419016 KAT8Q9H7Z6 458 aaKnown RBP13.01□□□□□ -0.33
CHMP5-202ENST00000419016 SIDT1Q9NXL6 827 aaKnown RBP13.01□□□□□ -0.33
CHMP5-202ENST00000419016 TAS2R9Q9NYW1 312 aa13.01□□□□□ -0.33
CHMP5-202ENST00000419016 SUCOQ9UBS9 1254 aaKnown RBP13.01□□□□□ -0.33
CHMP5-202ENST00000419016 UTS2RQ9UKP6 389 aa13.01□□□□□ -0.33
CHMP5-202ENST00000419016 PDPK1O15530 556 aa13.01□□□□□ -0.33
CHMP5-202ENST00000419016 RDH16O75452 317 aa13.01□□□□□ -0.33
CHMP5-202ENST00000419016 CPSF4O95639 269 aaKnown RBP13.01□□□□□ -0.33
CHMP5-202ENST00000419016 CPN2P22792 545 aa13.01□□□□□ -0.33
CHMP5-202ENST00000419016 MSX2P35548 267 aaPredicted RBP13.01□□□□□ -0.33
CHMP5-202ENST00000419016 BUD31P41223 144 aaPredicted RBP13.01□□□□□ -0.33
CHMP5-202ENST00000419016 GSK3BP49841 420 aa13.01□□□□□ -0.33
CHMP5-202ENST00000419016 GZMMP51124 257 aa13.01□□□□□ -0.33
CHMP5-202ENST00000419016 ITGA1P56199 1179 aa13.01□□□□□ -0.33
CHMP5-202ENST00000419016 ACTR3P61158 418 aa13.01□□□□□ -0.33
CHMP5-202ENST00000419016 LIPEQ05469 1076 aa13.01□□□□□ -0.33
CHMP5-202ENST00000419016 GAB1Q13480 694 aa13.01□□□□□ -0.33
CHMP5-202ENST00000419016 TRIM25Q14258 630 aaKnown RBP13.01□□□□□ -0.33
CHMP5-202ENST00000419016 KPNB1Q14974 876 aaKnown RBP13.01□□□□□ -0.33
CHMP5-202ENST00000419016 FAM214AQ32MH5 1076 aa13.01□□□□□ -0.33
CHMP5-202ENST00000419016 TLDC1Q6P9B6 456 aa13.01□□□□□ -0.33
CHMP5-202ENST00000419016 ZNF621Q6ZSS3 439 aa13.01□□□□□ -0.33
CHMP5-202ENST00000419016 RCBTB1Q8NDN9 531 aa13.01□□□□□ -0.33
CHMP5-202ENST00000419016 N4BP2L2Q92802 583 aaPredicted RBP13.01□□□□□ -0.33
CHMP5-202ENST00000419016 ATOH1Q92858 354 aaPredicted RBP13.01□□□□□ -0.33
CHMP5-202ENST00000419016 CCDC124Q96CT7 223 aaKnown RBP13.01□□□□□ -0.33
CHMP5-202ENST00000419016 ZNF583Q96ND8 569 aa13.01□□□□□ -0.33
CHMP5-202ENST00000419016 SH3GL1Q99961 368 aa13.01□□□□□ -0.33
CHMP5-202ENST00000419016 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.01□□□□□ -0.33
CHMP5-202ENST00000419016 L3MBTL1Q9Y468 752 aa13.01□□□□□ -0.33
CHMP5-202ENST00000419016 TMEM184BQ9Y519 407 aaPredicted RBP13.01□□□□□ -0.33
CHMP5-202ENST00000419016 MUC6Q6W4X9 2439 aa13.01□□□□□ -0.33
CHMP5-202ENST00000419016 NUP214P35658 2090 aaPredicted RBP13□□□□□ -0.33
CHMP5-202ENST00000419016 H0YIG0 161 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 ZNF749O43361 778 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 CHST10O43529 356 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 LMNAP02545 664 aaKnown RBP13□□□□□ -0.33
CHMP5-202ENST00000419016 PDX1P52945 283 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 TRA2AQ13595 282 aaKnown RBP eCLIP13□□□□□ -0.33
CHMP5-202ENST00000419016 CYB5D1Q6P9G0 228 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 ZNF551Q7Z340 670 aaPredicted RBP13□□□□□ -0.33
CHMP5-202ENST00000419016 CALHM3Q86XJ0 350 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 C10orf111Q8N326 155 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 TMEM52Q8NDY8 209 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 OR4A15Q8NGL6 344 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 SUN3Q8TAQ9 357 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 ZFP90Q8TF47 636 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 ASB9Q96DX5 294 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 MVB12AQ96EY5 273 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 ZBED6CLQ96FA7 236 aaPredicted RBP13□□□□□ -0.33
CHMP5-202ENST00000419016 AMDHD1Q96NU7 426 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 IRF2BPLQ9H1B7 796 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 GLIPR2Q9H4G4 154 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 RPF2Q9H7B2 306 aaKnown RBP13□□□□□ -0.33
CHMP5-202ENST00000419016 SIRT3Q9NTG7 399 aaPredicted RBP13□□□□□ -0.33
CHMP5-202ENST00000419016 CUTCQ9NTM9 273 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 ZNF282Q9UDV7 671 aaPredicted RBP13□□□□□ -0.33
CHMP5-202ENST00000419016 SERTAD3Q9UJW9 196 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 AP3M1Q9Y2T2 418 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 A0A1W2PS29 197 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 CLIC1O00299 241 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 DNAJA2O60884 412 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 ENTPD5O75356 428 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 ANP32DO95626 131 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 GPX2P18283 190 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 TLX1P31314 330 aaPredicted RBP13□□□□□ -0.33
CHMP5-202ENST00000419016 RAB38P57729 211 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 SKP1P63208 163 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 ACY1Q03154 408 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 DUSP2Q05923 314 aa13□□□□□ -0.33
CHMP5-202ENST00000419016 RIPK1Q13546 671 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms