RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 MAP3K3Q99759 626 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 DNAJC27Q9NZQ0 273 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 GGT3PA6NGU5 568 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 TTLL8A6PVC2 850 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 AOC1P19801 751 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 FAM3CQ92520 227 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 KIAA1191Q96A73 305 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 PEX11GQ96HA9 241 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 MSLNLQ96KJ4 702 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 MLXQ9UH92 298 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 NUFIP1Q9UHK0 495 aaKnown RBP10.78□□□□□ -0.68
PTCH1-205ENST00000418258 PIAS3Q9Y6X2 628 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 SHPRHQ149N8 1683 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 NR4A3Q92570 626 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 MCHR1Q99705 422 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 MROQ9BYG7 248 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 FXYD6-FXYD2A0A087WZ82 144 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 PRSS51A0A1B0GVH4 220 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 A8MVJ9 347 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 ZNF821O75541 412 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-205ENST00000418258 RNH1P13489 461 aaKnown RBP10.78□□□□□ -0.68
PTCH1-205ENST00000418258 GJA8P48165 433 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 SLC25A11Q02978 314 aaKnown RBP10.78□□□□□ -0.68
PTCH1-205ENST00000418258 RUNX3Q13761 415 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 DPY19L3Q6ZPD9 716 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 RPS27LQ71UM5 84 aaKnown RBP10.78□□□□□ -0.68
PTCH1-205ENST00000418258 C14orf80Q86SX3 495 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 LRRC25Q8N386 305 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-205ENST00000418258 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.78□□□□□ -0.682e-6■■■■■ 64.7
PTCH1-205ENST00000418258 CPT1CQ8TCG5 803 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 PROKR1Q8TCW9 393 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 LRIG1Q96JA1 1093 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 FXYD6Q9H0Q3 95 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 DNTTIP1Q9H147 329 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 HHATLQ9HCP6 504 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 CDRT1O95170 752 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 APBB3O95704 486 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 ADAM17P78536 824 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 ARG2P78540 354 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 HSD11B2P80365 405 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 GALNT2Q10471 571 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 GRHL2Q6ISB3 625 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 ZNF761Q86XN6 746 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-205ENST00000418258 ARHGAP12Q8IWW6 846 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 OR56A3Q8NH54 315 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 TAS2R10Q9NYW0 307 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 ATE1O95260 518 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 ENDOUP21128 410 aaKnown RBP10.78□□□□□ -0.68
PTCH1-205ENST00000418258 C5AR1P21730 350 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 FXYD6P3P58550 94 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 TAS2R43P59537 309 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 CYP1B1Q16678 543 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 KHDC1Q4VXA5 237 aaKnown RBP10.78□□□□□ -0.68
PTCH1-205ENST00000418258 OR14L1PQ8NHC6 308 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 ASB9Q96DX5 294 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 TMEM184CQ9NVA4 438 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 OARD1Q9Y530 152 aa10.78□□□□□ -0.68
PTCH1-205ENST00000418258 SOCS2O14508 198 aa10.77□□□□□ -0.68
PTCH1-205ENST00000418258 GSRP00390 522 aa10.77□□□□□ -0.68
PTCH1-205ENST00000418258 EPCAMP16422 314 aa10.77□□□□□ -0.68
PTCH1-205ENST00000418258 F8A1P23610 371 aa10.77□□□□□ -0.68
PTCH1-205ENST00000418258 LRFN4Q6PJG9 635 aa10.77□□□□□ -0.68
PTCH1-205ENST00000418258 CRTC1Q6UUV9 634 aa10.77□□□□□ -0.68
PTCH1-205ENST00000418258 SCAMP4Q969E2 229 aa10.77□□□□□ -0.68
PTCH1-205ENST00000418258 C1orf74Q96LT6 269 aa10.77□□□□□ -0.68
PTCH1-205ENST00000418258 TMEM168Q9H0V1 697 aa10.77□□□□□ -0.68
PTCH1-205ENST00000418258 DPAGT1Q9H3H5 408 aa10.77□□□□□ -0.68
PTCH1-205ENST00000418258 ZBTB20Q9HC78 741 aaPredicted RBP10.77□□□□□ -0.68
PTCH1-205ENST00000418258 PCDH10Q9P2E7 1040 aa10.77□□□□□ -0.68
PTCH1-205ENST00000418258 DHDHQ9UQ10 334 aa10.77□□□□□ -0.68
PTCH1-205ENST00000418258 HEMK1Q9Y5R4 338 aaPredicted RBP10.77□□□□□ -0.68
PTCH1-205ENST00000418258 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.77□□□□□ -0.69
PTCH1-205ENST00000418258 SH3PXD2BA1X283 911 aa10.77□□□□□ -0.69
PTCH1-205ENST00000418258 SMIM30A4D0T7 59 aa10.77□□□□□ -0.69
PTCH1-205ENST00000418258 ACTL6BO94805 426 aa10.77□□□□□ -0.69
PTCH1-205ENST00000418258 KCNJ11Q14654 390 aa10.77□□□□□ -0.69
PTCH1-205ENST00000418258 LIN52Q52LA3 116 aa10.77□□□□□ -0.69
PTCH1-205ENST00000418258 SPANXN4Q5MJ08 99 aa10.77□□□□□ -0.69
PTCH1-205ENST00000418258 TXNRD3NBQ6F5E7 133 aa10.77□□□□□ -0.69
PTCH1-205ENST00000418258 TREM1Q9NP99 234 aa10.77□□□□□ -0.69
PTCH1-205ENST00000418258 SCP2D1Q9UJQ7 156 aa10.77□□□□□ -0.69
PTCH1-205ENST00000418258 COQ4Q9Y3A0 265 aa10.77□□□□□ -0.69
PTCH1-205ENST00000418258 TSPAN4O14817 238 aa10.77□□□□□ -0.69
PTCH1-205ENST00000418258 SLC22A1O15245 554 aa10.77□□□□□ -0.69
PTCH1-205ENST00000418258 TBPL1P62380 186 aa10.77□□□□□ -0.69
PTCH1-205ENST00000418258 FBXO43Q4G163 708 aa10.77□□□□□ -0.69
PTCH1-205ENST00000418258 TIGD4Q8IY51 512 aa10.77□□□□□ -0.69
PTCH1-205ENST00000418258 RHBDD1Q8TEB9 315 aa10.77□□□□□ -0.69
PTCH1-205ENST00000418258 ZC3H10Q96K80 434 aaKnown RBP10.77□□□□□ -0.69
PTCH1-205ENST00000418258 C1orf21Q9H246 121 aa10.77□□□□□ -0.69
PTCH1-205ENST00000418258 C2orf78A6NCI8 922 aa10.77□□□□□ -0.69
PTCH1-205ENST00000418258 PCP4L1A6NKN8 68 aa10.77□□□□□ -0.69
PTCH1-205ENST00000418258 BRINP1O60477 761 aa10.77□□□□□ -0.69
PTCH1-205ENST00000418258 PRKCAP17252 672 aa10.77□□□□□ -0.69
PTCH1-205ENST00000418258 MPP2Q14168 576 aa10.77□□□□□ -0.69
PTCH1-205ENST00000418258 GALNT15Q8N3T1 639 aa10.77□□□□□ -0.69
PTCH1-205ENST00000418258 THAP4Q8WY91 577 aa10.77□□□□□ -0.69
PTCH1-205ENST00000418258 EPHA6Q9UF33 1036 aa10.77□□□□□ -0.69
PTCH1-205ENST00000418258 CD3GP09693 182 aa10.77□□□□□ -0.69
PTCH1-205ENST00000418258 THEGLP0DJG4 465 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms