RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 GPR143P51810 404 aa14.28□□□□□ -0.12
NUP50-204ENST00000417702 TDGF1P3P51864 188 aa14.28□□□□□ -0.12
NUP50-204ENST00000417702 NEK2P51955 445 aa14.28□□□□□ -0.12
NUP50-204ENST00000417702 PMP22Q01453 160 aa14.28□□□□□ -0.12
NUP50-204ENST00000417702 ID2Q02363 134 aa14.28□□□□□ -0.12
NUP50-204ENST00000417702 IFT88Q13099 833 aa14.28□□□□□ -0.12
NUP50-204ENST00000417702 MAPKAPK3Q16644 382 aa14.28□□□□□ -0.12
NUP50-204ENST00000417702 C4orf17Q53FE4 359 aa14.28□□□□□ -0.12
NUP50-204ENST00000417702 C10orf62Q5T681 223 aaPredicted RBP14.28□□□□□ -0.12
NUP50-204ENST00000417702 ZNF468Q5VIY5 522 aaPredicted RBP14.28□□□□□ -0.12
NUP50-204ENST00000417702 FRG2Q64ET8 278 aa14.28□□□□□ -0.12
NUP50-204ENST00000417702 CYP20A1Q6UW02 462 aa14.28□□□□□ -0.12
NUP50-204ENST00000417702 GALNTL5Q7Z4T8 443 aa14.28□□□□□ -0.12
NUP50-204ENST00000417702 MILR1Q7Z6M3 343 aa14.28□□□□□ -0.12
NUP50-204ENST00000417702 GSPT2Q8IYD1 628 aaKnown RBP14.28□□□□□ -0.12
NUP50-204ENST00000417702 ARMC10Q8N2F6 343 aa14.28□□□□□ -0.12
NUP50-204ENST00000417702 TMEM156Q8N614 296 aa14.28□□□□□ -0.12
NUP50-204ENST00000417702 MORN4Q8NDC4 146 aa14.28□□□□□ -0.12
NUP50-204ENST00000417702 WDR20Q8TBZ3 569 aa14.28□□□□□ -0.12
NUP50-204ENST00000417702 NSUN5Q96P11 429 aaKnown RBP14.28□□□□□ -0.12
NUP50-204ENST00000417702 FRG2BQ96QU4 278 aa14.28□□□□□ -0.12
NUP50-204ENST00000417702 HES7Q9BYE0 225 aa14.28□□□□□ -0.12
NUP50-204ENST00000417702 TXLNGYQ9BZA5 131 aa14.28□□□□□ -0.12
NUP50-204ENST00000417702 RPF2Q9H7B2 306 aaKnown RBP14.28□□□□□ -0.12
NUP50-204ENST00000417702 TRIM45Q9H8W5 580 aaPredicted RBP14.28□□□□□ -0.12
NUP50-204ENST00000417702 SEMA4BQ9NPR2 832 aaPredicted RBP14.28□□□□□ -0.12
NUP50-204ENST00000417702 LYARQ9NX58 379 aaKnown RBP14.28□□□□□ -0.12
NUP50-204ENST00000417702 PSMC3IPQ9P2W1 217 aaPredicted RBP14.28□□□□□ -0.12
NUP50-204ENST00000417702 SEC14L3Q9UDX4 400 aa14.28□□□□□ -0.12
NUP50-204ENST00000417702 FETUBQ9UGM5 382 aa14.28□□□□□ -0.12
NUP50-204ENST00000417702 C17orf105B2RV13 164 aa14.27□□□□□ -0.13
NUP50-204ENST00000417702 DYRK3O43781 588 aa14.27□□□□□ -0.13
NUP50-204ENST00000417702 ITGA10O75578 1167 aa14.27□□□□□ -0.13
NUP50-204ENST00000417702 OTCP00480 354 aa14.27□□□□□ -0.13
NUP50-204ENST00000417702 LDLRP01130 860 aa14.27□□□□□ -0.13
NUP50-204ENST00000417702 RPS17P08708 135 aaKnown RBP14.27□□□□□ -0.13
NUP50-204ENST00000417702 MST1P26927 711 aa14.27□□□□□ -0.13
NUP50-204ENST00000417702 PER3P56645 1201 aa14.27□□□□□ -0.13
NUP50-204ENST00000417702 KCNK10P57789 538 aa14.27□□□□□ -0.13
NUP50-204ENST00000417702 TNFRSF17Q02223 184 aa14.27□□□□□ -0.13
NUP50-204ENST00000417702 ALDH6A1Q02252 535 aaKnown RBP14.27□□□□□ -0.13
NUP50-204ENST00000417702 TRAF3Q13114 568 aa14.27□□□□□ -0.13
NUP50-204ENST00000417702 BIKQ13323 160 aa14.27□□□□□ -0.13
NUP50-204ENST00000417702 HSDL2Q6YN16 418 aa14.27□□□□□ -0.13
NUP50-204ENST00000417702 NUDT13Q86X67 352 aa14.27□□□□□ -0.13
NUP50-204ENST00000417702 ACMSDQ8TDX5 336 aa14.27□□□□□ -0.13
NUP50-204ENST00000417702 PTPMT1Q8WUK0 201 aaPredicted RBP14.27□□□□□ -0.13
NUP50-204ENST00000417702 TANKQ92844 425 aa14.27□□□□□ -0.13
NUP50-204ENST00000417702 ANKRD9Q96BM1 317 aaPredicted RBP14.27□□□□□ -0.13
NUP50-204ENST00000417702 MTFMTQ96DP5 389 aaKnown RBP14.27□□□□□ -0.13
NUP50-204ENST00000417702 DGAT2Q96PD7 388 aa14.27□□□□□ -0.13
NUP50-204ENST00000417702 OR8D2Q9GZM6 311 aa14.27□□□□□ -0.13
NUP50-204ENST00000417702 ELOVL6Q9H5J4 265 aa14.27□□□□□ -0.13
NUP50-204ENST00000417702 DDX31Q9H8H2 851 aaKnown RBP14.27□□□□□ -0.13
NUP50-204ENST00000417702 WDR41Q9HAD4 459 aa14.27□□□□□ -0.13
NUP50-204ENST00000417702 ZBTB26Q9HCK0 441 aa14.27□□□□□ -0.13
NUP50-204ENST00000417702 ZNF223Q9UK11 482 aaPredicted RBP14.27□□□□□ -0.13
NUP50-204ENST00000417702 PPT2Q9UMR5 302 aa14.27□□□□□ -0.13
NUP50-204ENST00000417702 YARS2Q9Y2Z4 477 aaKnown RBP14.27□□□□□ -0.13
NUP50-204ENST00000417702 ATG4BQ9Y4P1 393 aa14.27□□□□□ -0.13
NUP50-204ENST00000417702 DOPEY1Q5JWR5 2465 aa14.27□□□□□ -0.13
NUP50-204ENST00000417702 A0A0A6YYD5 115 aa14.26□□□□□ -0.13
NUP50-204ENST00000417702 A0A1B0GUH1 482 aa14.26□□□□□ -0.13
NUP50-204ENST00000417702 ASPDHA6ND91 283 aa14.26□□□□□ -0.13
NUP50-204ENST00000417702 A8MT66 165 aa14.26□□□□□ -0.13
NUP50-204ENST00000417702 LRRTM2O43300 516 aa14.26□□□□□ -0.13
NUP50-204ENST00000417702 FGF17O60258 216 aa14.26□□□□□ -0.13
NUP50-204ENST00000417702 NME2P1O60361 137 aa14.26□□□□□ -0.13
NUP50-204ENST00000417702 EEDO75530 441 aaKnown RBP14.26□□□□□ -0.13
NUP50-204ENST00000417702 SEMA3DO95025 777 aa14.26□□□□□ -0.13
NUP50-204ENST00000417702 UNC5CO95185 931 aa14.26□□□□□ -0.13
NUP50-204ENST00000417702 ETHE1O95571 254 aa14.26□□□□□ -0.13
NUP50-204ENST00000417702 STSP08842 583 aa14.26□□□□□ -0.13
NUP50-204ENST00000417702 RNF224P0DH78 156 aa14.26□□□□□ -0.13
NUP50-204ENST00000417702 NME2P22392 152 aa14.26□□□□□ -0.13
NUP50-204ENST00000417702 BSGP35613 385 aa14.26□□□□□ -0.13
NUP50-204ENST00000417702 SSR4P51571 173 aa14.26□□□□□ -0.13
NUP50-204ENST00000417702 CDH13P55290 713 aa14.26□□□□□ -0.13
NUP50-204ENST00000417702 HNRNPH2P55795 449 aaKnown RBP14.26□□□□□ -0.13
NUP50-204ENST00000417702 RBPJQ06330 500 aa14.26□□□□□ -0.13
NUP50-204ENST00000417702 GGTA1PQ4G0N0 100 aa14.26□□□□□ -0.13
NUP50-204ENST00000417702 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.26□□□□□ -0.13
NUP50-204ENST00000417702 OR4N5Q8IXE1 308 aa14.26□□□□□ -0.13
NUP50-204ENST00000417702 TMEM151AQ8N4L1 468 aa14.26□□□□□ -0.13
NUP50-204ENST00000417702 OR4F6Q8NGB9 312 aa14.26□□□□□ -0.13
NUP50-204ENST00000417702 ZNF483Q8TF39 744 aaPredicted RBP14.26□□□□□ -0.13
NUP50-204ENST00000417702 RBM18Q96H35 190 aaKnown RBP14.26□□□□□ -0.13
NUP50-204ENST00000417702 C1QTNF3Q9BXJ4 246 aa14.26□□□□□ -0.13
NUP50-204ENST00000417702 ZNF717Q9BY31 904 aaPredicted RBP14.26□□□□□ -0.13
NUP50-204ENST00000417702 AHSPQ9NZD4 102 aa14.26□□□□□ -0.13
NUP50-204ENST00000417702 TMEM216Q9P0N5 145 aa14.26□□□□□ -0.13
NUP50-204ENST00000417702 COPS7AQ9UBW8 275 aa14.26□□□□□ -0.13
NUP50-204ENST00000417702 PLEKHB1Q9UF11 243 aaPredicted RBP14.26□□□□□ -0.13
NUP50-204ENST00000417702 MYO7BQ6PIF6 2116 aa14.26□□□□□ -0.13
NUP50-204ENST00000417702 WIPF3A6NGB9 483 aa14.25□□□□□ -0.13
NUP50-204ENST00000417702 GOLGA8RI6L899 631 aa14.25□□□□□ -0.13
NUP50-204ENST00000417702 PROM1O43490 865 aa14.25□□□□□ -0.13
NUP50-204ENST00000417702 TMPRSS11DO60235 418 aa14.25□□□□□ -0.13
NUP50-204ENST00000417702 SBK3P0C264 359 aa14.25□□□□□ -0.13
NUP50-204ENST00000417702 FAM58BPP0C7Q3 252 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms