RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 ALDH6A1Q02252 535 aaKnown RBP16.81■□□□□ 0.28
VCP-202ENST00000417448 CPSF6Q16630 551 aaKnown RBP eCLIP16.81■□□□□ 0.28
VCP-202ENST00000417448 DEFB134Q4QY38 66 aa16.81■□□□□ 0.28
VCP-202ENST00000417448 PRMT9Q6P2P2 845 aa16.81■□□□□ 0.28
VCP-202ENST00000417448 FGD2Q7Z6J4 655 aa16.81■□□□□ 0.28
VCP-202ENST00000417448 CCNYL1Q8N7R7 359 aa16.81■□□□□ 0.28
VCP-202ENST00000417448 MDS2Q8NDY4 140 aa16.81■□□□□ 0.28
VCP-202ENST00000417448 CHDHQ8NE62 594 aaPredicted RBP16.81■□□□□ 0.28
VCP-202ENST00000417448 ARMC2Q8NEN0 867 aa16.81■□□□□ 0.28
VCP-202ENST00000417448 NT5CQ8TCD5 201 aa16.81■□□□□ 0.28
VCP-202ENST00000417448 UTP15Q8TED0 518 aaKnown RBP16.81■□□□□ 0.28
VCP-202ENST00000417448 TRPC4APQ8TEL6 797 aa16.81■□□□□ 0.28
VCP-202ENST00000417448 ZNF483Q8TF39 744 aaPredicted RBP16.81■□□□□ 0.28
VCP-202ENST00000417448 F2RL3Q96RI0 385 aa16.81■□□□□ 0.28
VCP-202ENST00000417448 VKORC1Q9BQB6 163 aa16.81■□□□□ 0.28
VCP-202ENST00000417448 EFCAB11Q9BUY7 163 aa16.81■□□□□ 0.28
VCP-202ENST00000417448 ZNF700Q9H0M5 742 aa16.81■□□□□ 0.28
VCP-202ENST00000417448 EHD1Q9H4M9 534 aa16.81■□□□□ 0.28
VCP-202ENST00000417448 KLHL1Q9NR64 748 aa16.81■□□□□ 0.28
VCP-202ENST00000417448 CCM2LQ9NUG4 571 aaPredicted RBP16.81■□□□□ 0.28
VCP-202ENST00000417448 TRPC4Q9UBN4 977 aa16.81■□□□□ 0.28
VCP-202ENST00000417448 GRID1Q9ULK0 1009 aa16.81■□□□□ 0.28
VCP-202ENST00000417448 TMCO1Q9UM00 188 aa16.81■□□□□ 0.28
VCP-202ENST00000417448 PPT2Q9UMR5 302 aa16.81■□□□□ 0.28
VCP-202ENST00000417448 LOC102723996A0A087X1L8 192 aa16.8■□□□□ 0.28
VCP-202ENST00000417448 ANKDD1BA6NHY2 528 aa16.8■□□□□ 0.28
VCP-202ENST00000417448 SAP18O00422 153 aaKnown RBP16.8■□□□□ 0.28
VCP-202ENST00000417448 CTIFO43310 598 aaKnown RBP16.8■□□□□ 0.28
VCP-202ENST00000417448 SUPT7LO94864 414 aa16.8■□□□□ 0.28
VCP-202ENST00000417448 MYL2P10916 166 aa16.8■□□□□ 0.28
VCP-202ENST00000417448 RGS1Q08116 209 aa16.8■□□□□ 0.28
VCP-202ENST00000417448 PWP1Q13610 501 aa16.8■□□□□ 0.28
VCP-202ENST00000417448 TBCCQ15814 346 aa16.8■□□□□ 0.28
VCP-202ENST00000417448 HIST2H2ACQ16777 129 aaPredicted RBP16.8■□□□□ 0.28
VCP-202ENST00000417448 NDUFA9Q16795 377 aa16.8■□□□□ 0.28
VCP-202ENST00000417448 SGO1Q5FBB7 561 aa16.8■□□□□ 0.28
VCP-202ENST00000417448 ZNF678Q5SXM1 525 aa16.8■□□□□ 0.28
VCP-202ENST00000417448 GARNL3Q5VVW2 1013 aa16.8■□□□□ 0.28
VCP-202ENST00000417448 HIST2H2AA3Q6FI13 130 aa16.8■□□□□ 0.28
VCP-202ENST00000417448 GRHL2Q6ISB3 625 aa16.8■□□□□ 0.28
VCP-202ENST00000417448 ZYG11AQ6WRX3 759 aa16.8■□□□□ 0.28
VCP-202ENST00000417448 BEST3Q8N1M1 668 aa16.8■□□□□ 0.28
VCP-202ENST00000417448 TRPV3Q8NET8 790 aa16.8■□□□□ 0.28
VCP-202ENST00000417448 OR7G3Q8NG95 312 aa16.8■□□□□ 0.28
VCP-202ENST00000417448 APOPT1Q96IL0 206 aa16.8■□□□□ 0.28
VCP-202ENST00000417448 IMMP1LQ96LU5 166 aa16.8■□□□□ 0.28
VCP-202ENST00000417448 RBCK1Q9BYM8 510 aa16.8■□□□□ 0.28
VCP-202ENST00000417448 SLC6A16Q9GZN6 736 aa16.8■□□□□ 0.28
VCP-202ENST00000417448 NT5DC2Q9H857 520 aa16.8■□□□□ 0.28
VCP-202ENST00000417448 ANKHQ9HCJ1 492 aa16.8■□□□□ 0.28
VCP-202ENST00000417448 FN1P02751 2386 aaKnown RBP16.79■□□□□ 0.28
VCP-202ENST00000417448 NKX2-6A6NCS4 301 aa16.79■□□□□ 0.28
VCP-202ENST00000417448 ASNA1O43681 348 aa16.79■□□□□ 0.28
VCP-202ENST00000417448 TGFB1P01137 390 aa16.79■□□□□ 0.28
VCP-202ENST00000417448 IMPDH1P20839 514 aa16.79■□□□□ 0.28
VCP-202ENST00000417448 AVPR1BP47901 424 aa16.79■□□□□ 0.28
VCP-202ENST00000417448 PRKAA2P54646 552 aa16.79■□□□□ 0.28
VCP-202ENST00000417448 EMP3P54852 163 aa16.79■□□□□ 0.28
VCP-202ENST00000417448 HERVK_113P63132 956 aa16.79■□□□□ 0.28
VCP-202ENST00000417448 BTN3A2P78410 334 aa16.79■□□□□ 0.28
VCP-202ENST00000417448 TRAF3Q13114 568 aa16.79■□□□□ 0.28
VCP-202ENST00000417448 LAPTM5Q13571 262 aa16.79■□□□□ 0.28
VCP-202ENST00000417448 TUBA3CQ13748 450 aa16.79■□□□□ 0.28
VCP-202ENST00000417448 FCRLBQ6BAA4 426 aa16.79■□□□□ 0.28
VCP-202ENST00000417448 MED27Q6P2C8 311 aa16.79■□□□□ 0.28
VCP-202ENST00000417448 TUBA3EQ6PEY2 450 aa16.79■□□□□ 0.28
VCP-202ENST00000417448 LCA5Q86VQ0 697 aa16.79■□□□□ 0.28
VCP-202ENST00000417448 DMRTC2Q8IXT2 367 aaPredicted RBP16.79■□□□□ 0.28
VCP-202ENST00000417448 MARVELD2Q8N4S9 558 aa16.79■□□□□ 0.28
VCP-202ENST00000417448 OR4F6Q8NGB9 312 aa16.79■□□□□ 0.28
VCP-202ENST00000417448 TCP10LQ8TDR4 215 aa16.79■□□□□ 0.28
VCP-202ENST00000417448 SCMH1Q96GD3 660 aa16.79■□□□□ 0.28
VCP-202ENST00000417448 FAM111AQ96PZ2 611 aa16.79■□□□□ 0.28
VCP-202ENST00000417448 MTERF1Q99551 399 aaKnown RBP16.79■□□□□ 0.28
VCP-202ENST00000417448 ZNF559Q9BR84 538 aa16.79■□□□□ 0.28
VCP-202ENST00000417448 ERVK-6Q9BXR3 956 aa16.79■□□□□ 0.28
VCP-202ENST00000417448 ANKRD10Q9NXR5 420 aa16.79■□□□□ 0.28
VCP-202ENST00000417448 ZNF225Q9UK10 706 aa16.79■□□□□ 0.28
VCP-202ENST00000417448 PLLPQ9Y342 182 aa16.79■□□□□ 0.28
VCP-202ENST00000417448 LRIT2A6NDA9 550 aa16.78■□□□□ 0.28
VCP-202ENST00000417448 RTCAO00442 366 aaKnown RBP16.78■□□□□ 0.28
VCP-202ENST00000417448 OR4F21O95013 312 aa16.78■□□□□ 0.28
VCP-202ENST00000417448 CLDN9O95484 217 aa16.78■□□□□ 0.28
VCP-202ENST00000417448 SERPINA6P08185 405 aa16.78■□□□□ 0.28
VCP-202ENST00000417448 SMIM10L1P0DMW3 83 aa16.78■□□□□ 0.28
VCP-202ENST00000417448 CPA3P15088 417 aa16.78■□□□□ 0.28
VCP-202ENST00000417448 ALOX12P18054 663 aa16.78■□□□□ 0.28
VCP-202ENST00000417448 PLA2G16P53816 162 aa16.78■□□□□ 0.28
VCP-202ENST00000417448 CLCQ05315 142 aa16.78■□□□□ 0.28
VCP-202ENST00000417448 DSG2Q14126 1118 aa16.78■□□□□ 0.28
VCP-202ENST00000417448 FAM53BQ14153 422 aa16.78■□□□□ 0.28
VCP-202ENST00000417448 E2F2Q14209 437 aa16.78■□□□□ 0.28
VCP-202ENST00000417448 CCDC153Q494R4 210 aa16.78■□□□□ 0.28
VCP-202ENST00000417448 PAGE2BQ5JRK9 111 aa16.78■□□□□ 0.28
VCP-202ENST00000417448 TMEM205Q6UW68 189 aa16.78■□□□□ 0.28
VCP-202ENST00000417448 MILR1Q7Z6M3 343 aa16.78■□□□□ 0.28
VCP-202ENST00000417448 EXOC3L1Q86VI1 746 aa16.78■□□□□ 0.28
VCP-202ENST00000417448 C10orf107Q8IVU9 208 aa16.78■□□□□ 0.28
VCP-202ENST00000417448 LAS2Q8IYD9 372 aa16.78■□□□□ 0.28
VCP-202ENST00000417448 AFAP1L2Q8N4X5 818 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms