RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 ARFIP1P53367 373 aa12.84□□□□□ -0.35
CPNE1-209ENST00000415920 ERVK-8P63133 956 aa12.84□□□□□ -0.35
CPNE1-209ENST00000415920 RAE1P78406 368 aaKnown RBP12.84□□□□□ -0.35
CPNE1-209ENST00000415920 DCDP81605 110 aaKnown RBP12.84□□□□□ -0.35
CPNE1-209ENST00000415920 MC1RQ01726 317 aa12.84□□□□□ -0.35
CPNE1-209ENST00000415920 DSG2Q14126 1118 aa12.84□□□□□ -0.35
CPNE1-209ENST00000415920 NKAIN1Q4KMZ8 207 aa12.84□□□□□ -0.35
CPNE1-209ENST00000415920 RFTN2Q52LD8 501 aaPredicted RBP12.84□□□□□ -0.35
CPNE1-209ENST00000415920 C6orf136Q5SQH8 315 aa12.84□□□□□ -0.35
CPNE1-209ENST00000415920 MFSD4BQ5TF39 518 aa12.84□□□□□ -0.35
CPNE1-209ENST00000415920 EPGNQ6UW88 154 aa12.84□□□□□ -0.35
CPNE1-209ENST00000415920 COX15Q7KZN9 410 aa12.84□□□□□ -0.35
CPNE1-209ENST00000415920 CPLX4Q7Z7G2 160 aa12.84□□□□□ -0.35
CPNE1-209ENST00000415920 CA13Q8N1Q1 262 aa12.84□□□□□ -0.35
CPNE1-209ENST00000415920 ZCCHC7Q8N3Z6 543 aaKnown RBP12.84□□□□□ -0.35
CPNE1-209ENST00000415920 CLHC1Q8NHS4 586 aa12.84□□□□□ -0.35
CPNE1-209ENST00000415920 CT55Q8WUE5 264 aa12.84□□□□□ -0.35
CPNE1-209ENST00000415920 CHTF18Q8WVB6 975 aa12.84□□□□□ -0.35
CPNE1-209ENST00000415920 PEX11GQ96HA9 241 aa12.84□□□□□ -0.35
CPNE1-209ENST00000415920 SMIM10Q96HG1 83 aa12.84□□□□□ -0.35
CPNE1-209ENST00000415920 MARK4Q96L34 752 aa12.84□□□□□ -0.35
CPNE1-209ENST00000415920 LRFN5Q96NI6 719 aa12.84□□□□□ -0.35
CPNE1-209ENST00000415920 OR52B2Q96RD2 323 aa12.84□□□□□ -0.35
CPNE1-209ENST00000415920 CSF3RQ99062 836 aa12.84□□□□□ -0.35
CPNE1-209ENST00000415920 LYARQ9NX58 379 aaKnown RBP12.84□□□□□ -0.35
CPNE1-209ENST00000415920 IFT80Q9P2H3 777 aaPredicted RBP12.84□□□□□ -0.35
CPNE1-209ENST00000415920 TRPC4Q9UBN4 977 aa12.84□□□□□ -0.35
CPNE1-209ENST00000415920 CTSFQ9UBX1 484 aa12.84□□□□□ -0.35
CPNE1-209ENST00000415920 GPN3Q9UHW5 284 aaPredicted RBP12.84□□□□□ -0.35
CPNE1-209ENST00000415920 MCM8Q9UJA3 840 aa12.84□□□□□ -0.35
CPNE1-209ENST00000415920 ADAM29Q9UKF5 820 aa12.84□□□□□ -0.35
CPNE1-209ENST00000415920 FBXW2Q9UKT8 454 aa12.84□□□□□ -0.35
CPNE1-209ENST00000415920 DLGAP4Q9Y2H0 992 aa12.84□□□□□ -0.35
CPNE1-209ENST00000415920 TMED5Q9Y3A6 229 aa12.84□□□□□ -0.35
CPNE1-209ENST00000415920 SPACA6W5XKT8 324 aa12.84□□□□□ -0.35
CPNE1-209ENST00000415920 NPIPB8E9PQR5 432 aa12.83□□□□□ -0.36
CPNE1-209ENST00000415920 PSMD12O00232 456 aaPredicted RBP12.83□□□□□ -0.36
CPNE1-209ENST00000415920 SHOX2O60902 331 aaPredicted RBP12.83□□□□□ -0.36
CPNE1-209ENST00000415920 ANXA4P09525 319 aaPredicted RBP12.83□□□□□ -0.36
CPNE1-209ENST00000415920 CCNYL3P0C7X3 344 aa12.83□□□□□ -0.36
CPNE1-209ENST00000415920 PRR35P0CG20 571 aa12.83□□□□□ -0.36
CPNE1-209ENST00000415920 NR2F6P10588 404 aa12.83□□□□□ -0.36
CPNE1-209ENST00000415920 SDC1P18827 310 aa12.83□□□□□ -0.36
CPNE1-209ENST00000415920 DRD4P21917 467 aa12.83□□□□□ -0.36
CPNE1-209ENST00000415920 XCR1P46094 333 aa12.83□□□□□ -0.36
CPNE1-209ENST00000415920 IDH3AP50213 366 aa12.83□□□□□ -0.36
CPNE1-209ENST00000415920 HNRNPH2P55795 449 aaKnown RBP12.83□□□□□ -0.36
CPNE1-209ENST00000415920 RAB38P57729 211 aa12.83□□□□□ -0.36
CPNE1-209ENST00000415920 RPS18P62269 152 aaKnown RBP12.83□□□□□ -0.36
CPNE1-209ENST00000415920 TNFRSF17Q02223 184 aa12.83□□□□□ -0.36
CPNE1-209ENST00000415920 CHAF1BQ13112 559 aa12.83□□□□□ -0.36
CPNE1-209ENST00000415920 MAD2L1Q13257 205 aaPredicted RBP12.83□□□□□ -0.36
CPNE1-209ENST00000415920 SLAMF1Q13291 335 aa12.83□□□□□ -0.36
CPNE1-209ENST00000415920 TUBB8Q3ZCM7 444 aa12.83□□□□□ -0.36
CPNE1-209ENST00000415920 ZNF385CQ66K41 422 aaPredicted RBP12.83□□□□□ -0.36
CPNE1-209ENST00000415920 CPZQ66K79 652 aa12.83□□□□□ -0.36
CPNE1-209ENST00000415920 TCTN3Q6NUS6 607 aa12.83□□□□□ -0.36
CPNE1-209ENST00000415920 NOXRED1Q6NXP6 359 aa12.83□□□□□ -0.36
CPNE1-209ENST00000415920 FAM199XQ6PEV8 388 aaPredicted RBP12.83□□□□□ -0.36
CPNE1-209ENST00000415920 FAM198BQ6UWH4 519 aa12.83□□□□□ -0.36
CPNE1-209ENST00000415920 RIPOR1Q6ZS17 1223 aa12.83□□□□□ -0.36
CPNE1-209ENST00000415920 ASB18Q6ZVZ8 466 aa12.83□□□□□ -0.36
CPNE1-209ENST00000415920 SPATA21Q7Z572 469 aa12.83□□□□□ -0.36
CPNE1-209ENST00000415920 PRSS58Q8IYP2 241 aa12.83□□□□□ -0.36
CPNE1-209ENST00000415920 LIX1Q8N485 282 aa12.83□□□□□ -0.36
CPNE1-209ENST00000415920 MAELQ96JY0 434 aaKnown RBP12.83□□□□□ -0.36
CPNE1-209ENST00000415920 RILPQ96NA2 401 aa12.83□□□□□ -0.36
CPNE1-209ENST00000415920 TSSK3Q96PN8 268 aa12.83□□□□□ -0.36
CPNE1-209ENST00000415920 MAPKAP1Q9BPZ7 522 aa12.83□□□□□ -0.36
CPNE1-209ENST00000415920 DPH2Q9BQC3 489 aaPredicted RBP12.83□□□□□ -0.36
CPNE1-209ENST00000415920 CHST8Q9H2A9 424 aa12.83□□□□□ -0.36
CPNE1-209ENST00000415920 DDX31Q9H8H2 851 aaKnown RBP12.83□□□□□ -0.36
CPNE1-209ENST00000415920 TEX10Q9NXF1 929 aaPredicted RBP12.83□□□□□ -0.36
CPNE1-209ENST00000415920 NOP53Q9NZM5 478 aaKnown RBP12.83□□□□□ -0.36
CPNE1-209ENST00000415920 KLHL14Q9P2G3 628 aa12.83□□□□□ -0.36
CPNE1-209ENST00000415920 PHF11Q9UIL8 331 aa12.83□□□□□ -0.36
CPNE1-209ENST00000415920 DAPP1Q9UN19 280 aa12.83□□□□□ -0.36
CPNE1-209ENST00000415920 G3BP2Q9UN86 482 aaKnown RBP12.83□□□□□ -0.36
CPNE1-209ENST00000415920 MAP4K5Q9Y4K4 846 aa12.83□□□□□ -0.36
CPNE1-209ENST00000415920 SHANK1Q9Y566 2161 aa12.83□□□□□ -0.36
CPNE1-209ENST00000415920 SPTBN1Q01082 2364 aaKnown RBP12.83□□□□□ -0.36
CPNE1-209ENST00000415920 MED13Q9UHV7 2174 aa12.82□□□□□ -0.36
CPNE1-209ENST00000415920 CHST10O43529 356 aa12.82□□□□□ -0.36
CPNE1-209ENST00000415920 DNAJB6O75190 326 aa12.82□□□□□ -0.36
CPNE1-209ENST00000415920 PRKRAO75569 313 aaKnown RBP12.82□□□□□ -0.36
CPNE1-209ENST00000415920 CDC123O75794 336 aaPredicted RBP12.82□□□□□ -0.36
CPNE1-209ENST00000415920 AIFM1O95831 613 aa12.82□□□□□ -0.36
CPNE1-209ENST00000415920 IL3P08700 152 aa12.82□□□□□ -0.36
CPNE1-209ENST00000415920 FAM58BPP0C7Q3 252 aa12.82□□□□□ -0.36
CPNE1-209ENST00000415920 PIM1P11309 404 aaPredicted RBP12.82□□□□□ -0.36
CPNE1-209ENST00000415920 RNH1P13489 461 aaKnown RBP12.82□□□□□ -0.36
CPNE1-209ENST00000415920 GNLYP22749 145 aa12.82□□□□□ -0.36
CPNE1-209ENST00000415920 CPN2P22792 545 aa12.82□□□□□ -0.36
CPNE1-209ENST00000415920 BUD31P41223 144 aaPredicted RBP12.82□□□□□ -0.36
CPNE1-209ENST00000415920 ALDH9A1P49189 494 aa12.82□□□□□ -0.36
CPNE1-209ENST00000415920 ARFIP2P53365 341 aa12.82□□□□□ -0.36
CPNE1-209ENST00000415920 LIM2P55344 173 aa12.82□□□□□ -0.36
CPNE1-209ENST00000415920 DNASE1L3Q13609 305 aa12.82□□□□□ -0.36
CPNE1-209ENST00000415920 RUNX2Q13950 521 aa12.82□□□□□ -0.36
CPNE1-209ENST00000415920 LSM12Q3MHD2 195 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms