RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 PXNP49023 591 aaPredicted RBP11.75□□□□□ -0.53
UBA3-203ENST00000415609 RAB28P51157 221 aa11.75□□□□□ -0.53
UBA3-203ENST00000415609 DMPKQ09013 629 aa11.75□□□□□ -0.53
UBA3-203ENST00000415609 TP53BP2Q13625 1128 aa11.75□□□□□ -0.53
UBA3-203ENST00000415609 DUSP7Q16829 419 aa11.75□□□□□ -0.53
UBA3-203ENST00000415609 C9orf50Q5SZB4 431 aa11.75□□□□□ -0.53
UBA3-203ENST00000415609 C6orf120Q7Z4R8 191 aa11.75□□□□□ -0.53
UBA3-203ENST00000415609 SLCO6A1Q86UG4 719 aa11.75□□□□□ -0.53
UBA3-203ENST00000415609 NDNFQ8TB73 568 aa11.75□□□□□ -0.53
UBA3-203ENST00000415609 ZBED6CLQ96FA7 236 aaPredicted RBP11.75□□□□□ -0.53
UBA3-203ENST00000415609 TMEM19Q96HH6 336 aa11.75□□□□□ -0.53
UBA3-203ENST00000415609 CAMK1GQ96NX5 476 aa11.75□□□□□ -0.53
UBA3-203ENST00000415609 C17orf62Q9BQA9 187 aa11.75□□□□□ -0.53
UBA3-203ENST00000415609 IMPAD1Q9NX62 359 aa11.75□□□□□ -0.53
UBA3-203ENST00000415609 HCN4Q9Y3Q4 1203 aa11.75□□□□□ -0.53
UBA3-203ENST00000415609 SNX11Q9Y5W9 270 aa11.75□□□□□ -0.53
UBA3-203ENST00000415609 TRANK1O15050 2925 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 PDZK1P1A8MUH7 402 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 FUT4P22083 530 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 TIE1P35590 1138 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 SOX9P48436 509 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 PCBP4P57723 403 aaKnown RBP11.74□□□□□ -0.53
UBA3-203ENST00000415609 VBP1P61758 197 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 KCNC4Q03721 635 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 OCA2Q04671 838 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 AGERQ15109 404 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 ADPRMQ3LIE5 342 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 C2orf27AQ580R0 203 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 ZNF776Q68DI1 518 aaPredicted RBP11.74□□□□□ -0.53
UBA3-203ENST00000415609 UBE3DQ7Z6J8 389 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 ZNF605Q86T29 641 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 CCDC103Q8IW40 242 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 DEPDC4Q8N2C3 294 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 AQP11Q8NBQ7 271 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 PROX1Q92786 737 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 ALPK1Q96QP1 1244 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 AMBNQ9NP70 447 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 NECTIN3Q9NQS3 549 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 SIRT3Q9NTG7 399 aaPredicted RBP11.74□□□□□ -0.53
UBA3-203ENST00000415609 LMCD1Q9NZU5 365 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 YBX2Q9Y2T7 364 aaKnown RBP11.74□□□□□ -0.53
UBA3-203ENST00000415609 PLEKHM1Q9Y4G2 1056 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 DOCK9Q9BZ29 2069 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 IGKV1-8A0A0C4DH67 115 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 OR2A25A4D2G3 310 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 OR52A4PA6NMU1 304 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 A8MVJ9 347 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 SCAMP1O15126 338 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 PPM1DO15297 605 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 CLEC3AO75596 197 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 RECKO95980 971 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 TEAD1P28347 426 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 GPC1P35052 558 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 OPRL1P41146 370 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 RANBP1P43487 201 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 GSTM5P46439 218 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 LIMS1P48059 325 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 NUDT6P53370 316 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 RPS21P63220 83 aaKnown RBP11.74□□□□□ -0.53
UBA3-203ENST00000415609 PRDX1Q06830 199 aaKnown RBP11.74□□□□□ -0.53
UBA3-203ENST00000415609 NR1D2Q14995 579 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 ITPRIPL2Q3MIP1 535 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 OR4C11Q6IEV9 310 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 KIAA1161Q6NSJ0 714 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 FAM20CQ8IXL6 584 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 DNAJC22Q8N4W6 341 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 AMER3Q8N944 861 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 OR2A1Q8NGT9 310 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 OR14C36Q8NHC7 312 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 RHOXF1Q8NHV9 184 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 TRUB1Q8WWH5 349 aaKnown RBP11.74□□□□□ -0.53
UBA3-203ENST00000415609 UCN3Q969E3 161 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 MYDGFQ969H8 173 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 TEFMQ96QE5 360 aaKnown RBP11.74□□□□□ -0.53
UBA3-203ENST00000415609 TIMM29Q9BSF4 260 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 DPH7Q9BTV6 452 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 RHBDL2Q9NX52 303 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 SELENONQ9NZV5 590 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 PSORS1C1Q9UIG5 152 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 ADAM29Q9UKF5 820 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 DUSP12Q9UNI6 340 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.74□□□□□ -0.53
UBA3-203ENST00000415609 GPSM3Q9Y4H4 160 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 CORINQ9Y5Q5 1042 aa11.74□□□□□ -0.53
UBA3-203ENST00000415609 A0A1W2PQU0 124 aa11.73□□□□□ -0.53
UBA3-203ENST00000415609 M0R129 80 aa11.73□□□□□ -0.53
UBA3-203ENST00000415609 HMGN4O00479 90 aa11.73□□□□□ -0.53
UBA3-203ENST00000415609 TOR1BO14657 336 aa11.73□□□□□ -0.53
UBA3-203ENST00000415609 SLC28A2O43868 658 aa11.73□□□□□ -0.53
UBA3-203ENST00000415609 B4GALT2O60909 372 aa11.73□□□□□ -0.53
UBA3-203ENST00000415609 PDE9AO76083 593 aa11.73□□□□□ -0.53
UBA3-203ENST00000415609 CD36P16671 472 aa11.73□□□□□ -0.53
UBA3-203ENST00000415609 CBLP22681 906 aa11.73□□□□□ -0.53
UBA3-203ENST00000415609 PKLRP30613 574 aa11.73□□□□□ -0.53
UBA3-203ENST00000415609 FRKP42685 505 aaPredicted RBP11.73□□□□□ -0.53
UBA3-203ENST00000415609 CCT3P49368 545 aaKnown RBP11.73□□□□□ -0.53
UBA3-203ENST00000415609 LBX1P52954 281 aa11.73□□□□□ -0.53
UBA3-203ENST00000415609 NCS1P62166 190 aa11.73□□□□□ -0.53
UBA3-203ENST00000415609 ENPP2Q13822 863 aa11.73□□□□□ -0.53
UBA3-203ENST00000415609 PUM1Q14671 1186 aaKnown RBP eCLIP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms