RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 MAGEC3Q8TD91 643 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 CDKL2Q92772 493 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 MR1Q95460 341 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 PYCR2Q96C36 320 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 BBC3Q96PG8 261 aaPredicted RBP4.65□□□□□ -1.67
VPS41-205ENST00000414632 FMO2Q99518 471 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 ZPBPQ9BS86 351 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 DPH7Q9BTV6 452 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 RAB11FIP5Q9BXF6 653 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 SPRY4Q9C004 299 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 SLC7A5P2Q9GIP4 190 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 MS4A7Q9GZW8 240 aaPredicted RBP4.65□□□□□ -1.67
VPS41-205ENST00000414632 RHOJQ9H4E5 214 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 SYNPO2LQ9H987 977 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 ACTR5Q9H9F9 607 aaPredicted RBP4.65□□□□□ -1.67
VPS41-205ENST00000414632 GPN2Q9H9Y4 310 aaPredicted RBP4.65□□□□□ -1.67
VPS41-205ENST00000414632 SPATA7Q9P0W8 599 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 TXNDC16Q9P2K2 825 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 DHCR7Q9UBM7 475 aaKnown RBP4.65□□□□□ -1.67
VPS41-205ENST00000414632 MTRF1LQ9UGC7 380 aaKnown RBP4.65□□□□□ -1.67
VPS41-205ENST00000414632 FBXO9Q9UK97 447 aaPredicted RBP4.65□□□□□ -1.67
VPS41-205ENST00000414632 PDE10AQ9Y233 779 aa4.65□□□□□ -1.67
VPS41-205ENST00000414632 TMEM184BQ9Y519 407 aaPredicted RBP4.65□□□□□ -1.67
VPS41-205ENST00000414632 FAM208BQ5VWN6 2430 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 ATRXP46100 2492 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 LOC105369274A0A096LPK9 316 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 IGKV1-8A0A0C4DH67 115 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 KRTAP4-8A0A0G2JLE6 195 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 LOC102723532A0A0G2JNH3 316 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 PABPN1LA6NDY0 278 aaKnown RBP4.64□□□□□ -1.67
VPS41-205ENST00000414632 B5MCH6 92 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 E7ENX8 843 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 E7EQ34 232 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 POC1B-GALNT4F8VUJ3 575 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 GFYI3L273 518 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 K7ENP7 123 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 EIF3FO00303 357 aaPredicted RBP4.64□□□□□ -1.67
VPS41-205ENST00000414632 FFAR3O14843 346 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 HAT1O14929 419 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 PIP5K1BO14986 540 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 GPR42O15529 346 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 CNOT4O95628 575 aaKnown RBP4.64□□□□□ -1.67
VPS41-205ENST00000414632 PRB1P04280 392 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 TUBB4AP04350 444 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 C8GP07360 202 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 CCDC166P0CW27 439 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 ERGP11308 486 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 JUNBP17275 347 aaPredicted RBP4.64□□□□□ -1.67
VPS41-205ENST00000414632 BTF3P20290 206 aaKnown RBP4.64□□□□□ -1.67
VPS41-205ENST00000414632 CMPK1P30085 196 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 STX2P32856 288 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 GP5P40197 560 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 SKIV2L2P42285 1042 aaKnown RBP4.64□□□□□ -1.67
VPS41-205ENST00000414632 GABRA4P48169 554 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 UCNP55089 124 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 TAP2Q03519 686 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 ABHD18Q0P651 414 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 FOXD4Q12950 439 aaPredicted RBP4.64□□□□□ -1.67
VPS41-205ENST00000414632 NAE1Q13564 534 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 DNASE1L3Q13609 305 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 NFYCQ13952 458 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 LY6DQ14210 128 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 ERV3-1Q14264 604 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 FRG1Q14331 258 aaKnown RBP4.64□□□□□ -1.67
VPS41-205ENST00000414632 CSHL1Q14406 222 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 OR4D1Q15615 310 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 TSNQ15631 228 aaKnown RBP4.64□□□□□ -1.67
VPS41-205ENST00000414632 RNF151Q2KHN1 245 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 ZXDCQ2QGD7 858 aaPredicted RBP4.64□□□□□ -1.67
VPS41-205ENST00000414632 HKDC1Q2TB90 917 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 FAM214AQ32MH5 1076 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 FAM153CQ494X1 144 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 MLIPQ5VWP3 458 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 ICE2Q659A1 982 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 BORAQ6PGQ7 559 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 INO80CQ6PI98 192 aaPredicted RBP4.64□□□□□ -1.67
VPS41-205ENST00000414632 AGTRAPQ6RW13 159 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 SBSNQ6UWP8 590 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 TTLL10Q6ZVT0 673 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 RAPH1Q70E73 1250 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 FRA10AC1Q70Z53 315 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 LRRC56Q8IYG6 542 aaPredicted RBP4.64□□□□□ -1.67
VPS41-205ENST00000414632 GPR135Q8IZ08 494 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 DSELQ8IZU8 1212 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 OR4N4Q8N0Y3 316 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 CARFQ8N187 725 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 Q8N3U1 123 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 DNAJC22Q8N4W6 341 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 ESX1Q8N693 406 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 ENDOVQ8N8Q3 282 aaKnown RBP4.64□□□□□ -1.67
VPS41-205ENST00000414632 FBXO15Q8NCQ5 510 aaPredicted RBP4.64□□□□□ -1.67
VPS41-205ENST00000414632 HMGCLL1Q8TB92 370 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 MCOLN3Q8TDD5 553 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.64□□□□□ -1.67
VPS41-205ENST00000414632 SMPDL3AQ92484 453 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 STARD8Q92502 1023 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 EXTL1Q92935 676 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 SPSB4Q96A44 273 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 ESAMQ96AP7 390 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 KIAA1143Q96AT1 154 aaPredicted RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms