RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 PLPP1O14494 284 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 COPEO14579 308 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 SIX3O95343 332 aaPredicted RBP5.97□□□□□ -1.45
USP54-202ENST00000413442 WDPCPO95876 746 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 IFNA16P05015 189 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 SP1P08047 785 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 FGF4P08620 206 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 IFI6P09912 130 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 SBK3P0C264 359 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 FAM153BP0C7A2 387 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 PYGBP11216 843 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 CPA3P15088 417 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 ALOX15P16050 662 aaPredicted RBP5.97□□□□□ -1.45
USP54-202ENST00000413442 NAGAP17050 411 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 NR1D1P20393 614 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 PIK3R1P27986 724 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 HMOX2P30519 316 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 BSGP35613 385 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 CD96P40200 585 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 ARL1P40616 181 aaPredicted RBP5.97□□□□□ -1.45
USP54-202ENST00000413442 STT3AP46977 705 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 MLLT10P55197 1068 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 CASP6P55212 293 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 MLF1P58340 268 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 DCAF7P61962 342 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 RPS13P62277 151 aaKnown RBP5.97□□□□□ -1.45
USP54-202ENST00000413442 PLIN5Q00G26 463 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 TNFRSF17Q02223 184 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 SRSF11Q05519 484 aaKnown RBP5.97□□□□□ -1.45
USP54-202ENST00000413442 IFFO1Q0D2I5 559 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 TRAF3Q13114 568 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 SPRED3Q2MJR0 410 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 FAM153CQ494X1 144 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 SPIN4Q56A73 249 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 CFAP157Q5JU67 520 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 TBCELQ5QJ74 424 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 CCNYL2Q5T2Q4 361 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 ZNF324BQ6AW86 544 aaPredicted RBP5.97□□□□□ -1.45
USP54-202ENST00000413442 OR52E8Q6IFG1 317 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 LINC00696Q6ZRV3 163 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 LANCL3Q6ZV70 420 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 TRIM46Q7Z4K8 759 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 UBE3DQ7Z6J8 389 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 CUZD1Q86UP6 607 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 CRLF3Q8IUI8 442 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 CYP4X1Q8N118 509 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 DTWD1Q8N5C7 304 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 CISD2Q8N5K1 135 aaKnown RBP5.97□□□□□ -1.45
USP54-202ENST00000413442 TMEM156Q8N614 296 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 NATD1Q8N6N6 113 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 GOLM1Q8NBJ4 401 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 OR4F6Q8NGB9 312 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 OR4K14Q8NGD5 310 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 METTL6Q8TCB7 284 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 MZB1Q8WU39 189 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 SELENOMQ8WWX9 145 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 EXT2Q93063 718 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 RNF31Q96EP0 1072 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 SCMH1Q96GD3 660 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 C5orf34Q96MH7 638 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 DGAT2Q96PD7 388 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 MTERF1Q99551 399 aaKnown RBP5.97□□□□□ -1.45
USP54-202ENST00000413442 MAPKAP1Q9BPZ7 522 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 UNKQ9C0B0 810 aaKnown RBP5.97□□□□□ -1.45
USP54-202ENST00000413442 AICDAQ9GZX7 198 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 OR51B5Q9H339 312 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 CDCP1Q9H5V8 836 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 ANKZF1Q9H8Y5 726 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 EML4Q9HC35 981 aaKnown RBP5.97□□□□□ -1.45
USP54-202ENST00000413442 ZBTB26Q9HCK0 441 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 SSU72Q9NP77 194 aaKnown RBP5.97□□□□□ -1.45
USP54-202ENST00000413442 TIMMDC1Q9NPL8 285 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 RRAGDQ9NQL2 400 aaPredicted RBP5.97□□□□□ -1.45
USP54-202ENST00000413442 OLAHQ9NV23 265 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 OXSMQ9NWU1 459 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 TAS2R7Q9NYW3 318 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 EHD3Q9NZN3 535 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 LRFN1Q9P244 771 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 MYOTQ9UBF9 498 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 LGALS13Q9UHV8 139 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 RNF11Q9Y3C5 154 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 ASB4Q9Y574 426 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 ATRXP46100 2492 aa5.96□□□□□ -1.46
USP54-202ENST00000413442 ANKRD33BA6NCL7 494 aa5.96□□□□□ -1.46
USP54-202ENST00000413442 ANKUB1A6NFN9 424 aa5.96□□□□□ -1.46
USP54-202ENST00000413442 WIPF3A6NGB9 483 aa5.96□□□□□ -1.46
USP54-202ENST00000413442 ZNF860A6NHJ4 632 aa5.96□□□□□ -1.46
USP54-202ENST00000413442 TTC36A6NLP5 189 aa5.96□□□□□ -1.46
USP54-202ENST00000413442 GABRR3A8MPY1 467 aa5.96□□□□□ -1.46
USP54-202ENST00000413442 TCP11X1B4DZS4 312 aa5.96□□□□□ -1.46
USP54-202ENST00000413442 FAM227AF5H4B4 570 aa5.96□□□□□ -1.46
USP54-202ENST00000413442 FFAR3O14843 346 aa5.96□□□□□ -1.46
USP54-202ENST00000413442 GPR42O15529 346 aa5.96□□□□□ -1.46
USP54-202ENST00000413442 DLX3O60479 287 aa5.96□□□□□ -1.46
USP54-202ENST00000413442 TRIM13O60858 407 aa5.96□□□□□ -1.46
USP54-202ENST00000413442 CDC123O75794 336 aaPredicted RBP5.96□□□□□ -1.46
USP54-202ENST00000413442 MYO1DO94832 1006 aa5.96□□□□□ -1.46
USP54-202ENST00000413442 CHEK2O96017 543 aa5.96□□□□□ -1.46
USP54-202ENST00000413442 STSP08842 583 aa5.96□□□□□ -1.46
USP54-202ENST00000413442 UROSP10746 265 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms